| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3927418 = | 17 (0.920) | 6 (0.400) | 4/108 | 1.2 | 29.4% | coding (264/993 nt) | asnA | asparagine synthetase A |
| ? | NC_000913 | 3927457 = | 15 (0.990) | coding (303/993 nt) | asnA | asparagine synthetase A | |||||
AGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTGGGAACGCGTAATGG > NC_000913/3927390‑3927524 | gtgcaacggagaaagacggtcttcatcggggcgaagggctttcatgtgcgtgtacagcccttcgcccc < 2:481646‑M2/1‑1 (MQ=255) cTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATg > 1:421270/1‑68 (MQ=255) ctAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGa < 2:299772/67‑1 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc < 2:321574/68‑1 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAca > 1:214848/1‑67 (MQ=255) gCAACAAGACTTCAGCGCTGGAGAAGGTCTGTACACGCACATGAAATCCCATCGCCCAGATGAAGaac > 1:103943/1‑66 (MQ=255) acGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCtt < 2:130725/68‑1 (MQ=255) acGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCtt < 1:581753/68‑1 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCg > 1:22845/1‑68 (MQ=255) tCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCAATCGCCCCGATGAAGACCGTCTTTCTCCg > 1:620388/1‑68 (MQ=255) gGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCAc < 2:481646‑M1/67‑1 (MQ=255) CGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg > 1:368928‑M1/1‑68 (MQ=255) CGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg > 2:338184‑M1/1‑68 (MQ=255) CGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg > 2:686032‑M1/1‑68 (MQ=255) GGCTGTACTCGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt > 2:660214‑M1/1‑68 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt < 1:50352‑M1/68‑1 (MQ=255) catgtgcgtgtacagcccttcgcccCGATGAAGCCCGTCTTTCTCCGTTGCACTCGGTCTATGTTGAc > 2:86947‑M2/26‑68 (MQ=255) catgtgcgtgtacagcccttcgcccCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGAc > 1:210937‑M2/26‑68 (MQ=255) acacGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGAc > 1:55964/1‑68 (MQ=255) acacGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGAc < 1:118905/68‑1 (MQ=255) atgtgcgtgtacagcccttcgcccCGATGAAGACCGTCtt < 2:148141‑M2/16‑1 (MQ=255) atgtgcgtgtacagcccttcgcccCGATGAAGACCGTCtt > 1:148141‑M2/25‑40 (MQ=255) atgtgcgtgtacagcccttcgcccCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGAcc > 2:78059‑M2/25‑68 (MQ=255) gCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGt < 1:155519/68‑1 (MQ=255) cacaTGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTg > 2:490769/1‑68 (MQ=255) cacaTGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACAAGTg > 1:223072/1‑68 (MQ=255) aTGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGa < 1:170590/68‑1 (MQ=255) cGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTGGGAACGCGTAATgg < 1:490771/68‑1 (MQ=255) | AGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTGGGAACGCGTAATGG > NC_000913/3927390‑3927524 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |