New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1492172 =	10 (0.540)	3 (0.180)	3/118	1.6	27.4%	noncoding (54/56 nt)	sokB	sRNA antisense regulator blocking mokB, and hence hokB, translation
	?	NC_000913	1492206 =	7 (0.420)					intergenic (+32/‑264)	sokB/trg	sRNA antisense regulator blocking mokB, and hence hokB, translation/methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor

TCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCAC  >  NC_000913/1492139‑1492259                                                                    |                                                      tCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGt                                                       <  2:224117/68‑1 (MQ=255)            aaaTATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCAccc                                            <  2:124055/68‑1 (MQ=255)                  cggtcggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGc                                      >  2:520534/1‑68 (MQ=255)                  cggtcggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGc                                      >  2:643188/1‑68 (MQ=255)                  cggtcggGGCCTTAGTCTTTCTGATTCCCGGTTAGCCTGAAAGCAGAAAGTCTCAGGCACCCGCAGGc                                      >  2:259917/1‑68 (MQ=255)                      cggGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATcc                                  <  1:663218/68‑1 (MQ=255)                             ctCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAgg                           <  2:10420/67‑1 (MQ=255)                                  CTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTcc                      >  2:402788‑M1/1‑68 (MQ=255)                                               ggctaaccgggaatcagaaagTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGaa           >  1:490524‑M2/22‑66 (MQ=255)                                               ggctaaccgggaatcagaaagTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGaa           <  2:490522‑M2/45‑1 (MQ=255)                                                      cgggaatcagaaagTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCAc  >  2:366686‑M2/15‑68 (MQ=255)                                                                    |                                                      TCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCAC  >  NC_000913/1492139‑1492259

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.