| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 486,122 | IS1 (–) +8 bp | coding (362‑369/648 nt) | acrR → | transcriptional repressor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 258675 | NA (NA) | 38 (1.690) | 17/132 | 0.2 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 486122 = | 0 (0.000) | coding (362/648 nt) | acrR | transcriptional repressor | |||||
| * | ? | NC_000913 | 279163 = | NA (NA) | 26 (1.180) | 16/130 | 0.2 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 486129 | 0 (0.000) | coding (369/648 nt) | acrR | transcriptional repressor | |||||
AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/258609‑258675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA > NC_000913/486122‑486185 AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCG < 2:60727/68‑1AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCG < 1:679035/68‑1AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCG < 1:67598/68‑1 ACAGAAGCCACTGGAGCACCTCAAAAACGCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGA > 2:411622/1‑68 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGA > 2:447036/1‑68 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGA > 2:286476/1‑68 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGA > 2:244281/1‑68 CAGAATCCACTGTAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTTGCAGCATCACCGAG < 1:234730/68‑1 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAG > 2:791840/1‑68 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCAACACCGAG > 1:356105/1‑68 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCTGCATCACCGAGA < 1:685460/68‑1 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGA > 2:603444/1‑68 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGG > 2:141230/1‑68 ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCT < 2:687234/68‑1 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTG > 2:631359/1‑68 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGT < 1:67632/68‑1 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGT > 2:625231/1‑68 ACACCATCATACACTAAATCAGTAAGTCGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACA < 1:88768/68‑1 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAA < 1:465189/68‑1 ACCATCATACTCTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:758799/68‑1 ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAAC < 1:317063/68‑1 ACCATAATACACTAAATCAGTAAGTTGGCAGCATCACCTAGAAATGGCTGTTGTGCAACAGGAACAAa > 2:758800/1‑67 ACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTC > 1:384835/1‑68 ACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTC > 2:33914/1‑68 ACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTC > 2:356529/1‑68 ACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTC > 1:131038/1‑68 ACTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTG > 2:130669/1‑68 CTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGT > 1:601525/1‑68 CTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGT > 2:637139/1‑68 CTAAATCAGTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGT > 2:636231/1‑68 GTAAGTTGGCAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG < 2:272897/68‑1 GTAAGTTGGCAGCATCACCGAGAAATGGCTGTAGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAG < 2:594483/68‑1 CAGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCG < 2:425306/68‑1 AGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:722158/68‑1 AGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 1:244280/68‑1 AGCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGT < 2:187269/68‑1 GCATCACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCACTGTCTGGAAAGTTATGAACGTA > 1:402786/1‑68 CACCGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA < 2:384836/68‑1 AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/258609‑258675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGA > NC_000913/486122‑486185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |