| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 291401 | NA (NA) | 57 (2.540) | 29/132 | 0.0 | 89.1% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 807574 | 7 (0.310) | coding (336/477 nt) | ybhB | kinase inhibitor homolog, UPF0098 family | |||||
AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGA > NC_000913/291338‑291466 | aGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAt > 2:380630/1‑68 (MQ=33) aGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAtttt > 1:188759/1‑68 (MQ=39) aGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAtttt > 2:580196/1‑68 (MQ=39) taGCACCTCTAATACTCCTTCATTCACTAAATCTGTAATTTGGCAGCATCACCGAATTTTCAGCCCgg < 1:74988/67‑1 (MQ=17) gAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCgg > 2:291353/1‑68 (MQ=255) aGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGa > 2:442722/1‑68 (MQ=255) aGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGa > 2:121166/1‑68 (MQ=255) aGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGa < 2:118005/68‑1 (MQ=255) aGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATATTCAGCACGGa > 2:774057/1‑68 (MQ=255) aGCACCTCAAAAACACCATAATACACTAAATCAGTAAGTAGGCAGCATCACCGAATTATCAGACCGGa > 2:74989/1‑68 (MQ=14) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGttt < 1:453482/68‑1 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTc < 2:769445/68‑1 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTc < 1:825047/68‑1 (MQ=255) aaCACCATCATACACTAATTCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTa < 2:222521/68‑1 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGTATGTTTCACGTa < 2:521082/68‑1 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTa > 2:558212/1‑68 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTa < 2:521304/68‑1 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTa > 2:418000/1‑68 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTa < 2:355050/68‑1 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTa < 1:447035/68‑1 (MQ=255) tcatATACTTAATCAGTATGTTGGCAGCATCACCGAATTTTGATCACGTATGTTTCTGGTACCTATGt < 2:262407/68‑1 (MQ=12) catACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTc < 2:218054/68‑1 (MQ=255) acgcTAAATCAGGAAGTAGGCAGCAGCACCGAATTTTCGGCCGGGAGGTTTCCCGTACGTAGGTCGaa > 1:15517/4‑68 (MQ=255) acacTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCAc < 1:347093/54‑1 (MQ=255) acacTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCAc > 2:347094/1‑54 (MQ=255) acacAAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTAAGTCGaa > 2:752257/1‑68 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGGTGTTTCACGTACCTATGTCGAata > 1:572273/1‑68 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTc > 2:524226/1‑50 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTc < 1:524225/50‑1 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGt > 1:430279/1‑62 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGt < 2:430280/62‑1 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAata > 1:544846/1‑68 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAata > 2:454334/1‑68 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAata > 2:378041/1‑68 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAata > 2:640997/1‑68 (MQ=255) cTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAatat < 1:409278/68‑1 (MQ=255) tCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACg > 2:631570/1‑47 (MQ=255) tCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACg < 1:631569/47‑1 (MQ=255) tCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGc > 2:81538/1‑68 (MQ=255) tCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGc > 1:594238/1‑68 (MQ=255) tCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGc > 2:555564/1‑68 (MQ=255) aGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCg < 1:697850/68‑1 (MQ=255) aGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCg < 2:507086/68‑1 (MQ=255) aGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCg > 1:229663/1‑68 (MQ=255) aGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGAGGTTTCACGTACCTATGTCGAATATCTGGCCg < 2:37496/68‑1 (MQ=255) aGTAAGTTGGCAGCATCACCGAATTTTCAGACCGGATGTTTCACGTACCTATGTCGAATATCTGGCCg > 2:398224/1‑68 (MQ=255) tAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGAt > 1:633775/1‑68 (MQ=255) aGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCg > 2:553834/1‑64 (MQ=255) aGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCg < 1:553833/64‑1 (MQ=255) aGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATaa > 2:531814/1‑68 (MQ=255) tGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGt < 2:335909/68‑1 (MQ=255) tGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGt < 2:97206/68‑1 (MQ=255) gcaTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCgg > 2:411114/1‑68 (MQ=255) gcaTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGAgg > 2:263612/1‑68 (MQ=255) gcaTCACCGAATTTTCAGCCCGGATGTTTCACGTACAGAGGTCGAATATCAGGCAGAATAGGATGCgg > 1:271556/1‑68 (MQ=255) aTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGAt < 2:633776/68‑1 (MQ=255) aTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGAt < 2:685074/68‑1 (MQ=255) aTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGAt < 1:589988/68‑1 (MQ=255) aCCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCga > 2:52379/1‑68 (MQ=255) | AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGA > NC_000913/291338‑291466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |