| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 291401 | NA (NA) | 105 (3.280) | 38/132 | 0.0 | 80.8% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 807574 | 25 (0.780) | coding (336/477 nt) | ybhB | kinase inhibitor homolog, UPF0098 family | |||||
Only 100 of 105 total aligned reads displayed.
ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291336‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGATGTCGATGAAG < NC_000913/807574‑807513 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAA < 2:1132697/68‑1ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAA > 2:337930/1‑68 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACT > 1:689954/1‑68 AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCA < 1:148590/68‑1 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCAa > 1:1008112/1‑67 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCAT > 2:842248/1‑68 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATC < 1:567284/68‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCG > 1:1127625/1‑68 CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGC < 1:137244/68‑1 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACA < 2:364668/68‑1 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACA < 2:111182/68‑1 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAGCTCATCGCTACAgt > 2:363824/1‑66 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATT < 1:673286/68‑1 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATT < 1:1131891/68‑1 GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTT > 2:242010/1‑68 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACC > 2:580989/1‑68 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGT < 1:585435/68‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGT < 1:1002510/68‑1 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTT < 2:1127623/68‑1 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCA > 2:368225/1‑68 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTATACCGTaaa > 1:778640/1‑65 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCAACATTTTTACCGTTCc > 2:130638/1‑67 ACCAACATACACTAAATCAGTAAGTTGTCAGCATCACCAACTCATCGCTACAAATTTACCGTTCCCGC > 1:1173946/1‑68 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGC < 1:935249/68‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGC < 1:152362/68‑1 aCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTG < 2:1030424/67‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTG < 2:402610/68‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTG < 2:1014371/68‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTG < 1:684846/68‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTG < 1:580989/68‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTG < 1:271953/68‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTG < 1:50904/68‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTG < 2:89962/68‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTG < 1:337930/68‑1 CATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGG < 1:808576/68‑1 CATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGG < 2:388559/68‑1 CATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGG < 2:661128/68‑1 CATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGG < 1:275595/68‑1 CATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGG < 2:380366/68‑1 CATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTCCACGCGCTGG < 2:400805/68‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGA < 1:879555/68‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGA < 1:842248/68‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGA < 1:264309/68‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGA < 2:1080441/68‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGA < 2:335671/68‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGA < 1:647479/68‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTG > 1:172364/1‑66 ATACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTG < 2:172364/66‑1 TACACTTAATCAGTATGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCTCGCGCTGGAT < 2:867462/68‑1 TACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGAT < 1:242010/68‑1 TACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGAT < 2:682164/68‑1 TACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGAT < 2:708365/68‑1 TACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGAT < 1:1016995/68‑1 TACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGAT < 2:220153/68‑1 TACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGAT < 1:397316/68‑1 TACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGAT < 1:295124/68‑1 ACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATA > 2:693220/1‑68 ACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATA < 2:287615/68‑1 ACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGAT > 1:855334/1‑67 ACACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGAT < 2:855334/67‑1 ACACTAAATCAGTAAGTTGGCAGCATCACCAACACATCGCTACATTTTTACCGTTCACGCGCTGGATA > 1:1093010/1‑68 CACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATAT < 1:365555/68‑1 ACTAAGTCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATA > 2:1132530/1‑68 ACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTGCATTTTTACCGTTCACGCGCTGGATATA > 2:935641/1‑68 ACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATA > 1:72140/1‑68 ACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATA > 1:550492/1‑68 ACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATA > 1:972427/1‑68 ACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGA < 2:68996/64‑1 ACTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGA > 1:68996/1‑64 CTAAATCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAG < 2:71871/68‑1 aCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGT < 1:130638/67‑1 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGT < 2:72140/68‑1 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGT > 1:1070189/1‑68 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGT < 2:550492/68‑1 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGT > 1:265882/1‑68 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGT > 2:713496/1‑68 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGT > 1:269501/1‑68 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGT < 2:207527/68‑1 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGG < 1:175148/57‑1 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGG > 2:175148/1‑57 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCAGGATATAGAACGT > 2:1010104/1‑68 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGT > 1:153526/1‑46 TCAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGT < 2:153526/46‑1 CAGTAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTA < 1:668181/68‑1 TAAGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTG > 2:276795/1‑68 AGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGAT > 1:315009/1‑68 AGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGAT > 1:690940/1‑68 AGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGAT > 1:736980/1‑68 AGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGAT > 1:1178009/1‑68 AGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGA < 1:1128496/52‑1 AGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCG < 1:237292/47‑1 AGTTGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCG > 2:237292/1‑47 TTGGCAGCATCACCAACTCATCTCTTCATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGATGT < 2:633120/68‑1 TGGCAGCATCACCATCTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGATGTC < 2:778640/68‑1 TGGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGATGTC < 2:1093009/68‑1 GGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATTTAGAACGTATTGATGTCG > 1:419966/1‑68 GGCAGCATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGATGTCG > 2:1163171/1‑68 ATCACCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGATGTCGATGAAG < 2:1068697/68‑1 CCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGATGT < 1:1156967/56‑1 CCAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGATGT > 2:1156965/1‑56 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291336‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGATGTCGATGAAG < NC_000913/807574‑807513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |