| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1287474 = | 24 (0.620) | 9 (0.260) | 7/114 | 2.0 | 29.9% | intergenic (‑146/+64) | tyrV/tyrT | tRNA‑Tyr/tRNA‑Tyr |
| ? | NC_000913 | 1287554 = | NA (NA) | noncoding (69/85 nt) | tyrT | tRNA‑Tyr | |||||
CCCCACCACCATAATTCACCACAGCGATGTGGTAACTTCGGTGAGATTGTGAAAGTTTGCACTCATCGGGGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1287548‑1287474‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggaaggATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCC > NC_000913/1287554‑1287619 CCCCACCACCATAATTCACCACAGCGATGTGGTAACTTCGGTGAGATTGTGAAAGTTTGCACTCATCG < 1:1025639/68‑1 CCACCACCATAATTCACCACAGCGATGTGGTAACTTCGGTGAGATTGTGAAAGTTTGCACTCATCGGG < 2:56667/68‑1 CACCACCATAATTCACCACAGCGATGTGGTAACTTCGGTGAGATTGTGAAAGTTTGCACTCATCGGGG > 1:625792/1‑68 ACCATAATTCACCACAGCGATGTGGTAACTTCGGTGAGATTGTGAAAGTTTGCACTCATCGGGGAAGG > 1:905957/1‑68 CATAATTCACCACAGCGATGTGGTAACTTCGGTGAGATTGTGAAAGTTTGCACTCATCGGGGAAGGAT > 1:1231746/1‑68 TCACCGCAGCGATGTGGTAACTTCGGTGAGATAGTGAAAGTTTGCCCTCATCGGGGAAGGAATCGAAC > 2:323633/1‑68 TCACCACAGCGATGTGGTAACTTCGGTGAGATTGTGAAAGTTTGCACTCATCGGGGAAGGATTCGAAC > 2:200745/1‑68 CGGTGAGATTGTGAAAGTTTGCACTCATCGGGGAAGGGTTCGAGCCTTCGAAGTCGATGACGGCAGAT > 2:1318588/1‑68 CGGTGAGATTGTGAAAGTTTGCACTCATCGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGAT > 2:1290741/1‑68 GTGAGATTGTGAAAGTTTGCACTCATCGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTT > 2:329623/1‑68 TTGTGAAAGTTTGCACTCATCGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTC > 2:497103/1‑68 CTCATCGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCG > 2:84794/1‑68 ATCGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTC < 1:200747/68‑1 GGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGA > 1:60569/1‑68 AAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACC < 1:901316/68‑1 GGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCC < 2:1025634/68‑1 CCCCACCACCATAATTCACCACAGCGATGTGGTAACTTCGGTGAGATTGTGAAAGTTTGCACTCATCGGGGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1287548‑1287474‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggaaggATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCC > NC_000913/1287554‑1287619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |