| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1287474 = | 24 (0.620) | 9 (0.260) | 7/114 | 2.0 | 29.9% | intergenic (‑146/+64) | tyrV/tyrT | tRNA‑Tyr/tRNA‑Tyr |
| ? | NC_000913 | 1287554 = | NA (NA) | noncoding (69/85 nt) | tyrT | tRNA‑Tyr | |||||
GGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGT > NC_000913/1287408‑1287541 | ggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatcc < 2:1025634‑M1/2‑1 (MQ=255) ggCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCt > 2:810209/1‑68 (MQ=255) ggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCtt < 1:901316‑M1/4‑1 (MQ=255) ccGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTc < 1:87212/68‑1 (MQ=255) ccGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTc < 1:792369/68‑1 (MQ=255) ccGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTc > 1:246633/1‑68 (MQ=255) tcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTccc > 1:60569‑M1/62‑68 (MQ=255) tGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCg < 1:1163214/68‑1 (MQ=255) gagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTCCCCGAt < 1:200747‑M1/11‑1 (MQ=255) cggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTCCCCGATGAg > 2:84794‑M1/55‑68 (MQ=255) tgGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGt < 1:728470/68‑1 (MQ=255) gCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGc > 1:803134/1‑68 (MQ=255) aCGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCaaa < 1:1092777/68‑1 (MQ=255) gTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACt < 1:1270154/68‑1 (MQ=255) tctctcGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACttt < 1:525316/68‑1 (MQ=255) tctctcGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACttt < 1:115765/68‑1 (MQ=255) tcGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCTAACTTTcaca > 2:828185/1‑68 (MQ=255) tcGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTcaca > 2:478556/1‑68 (MQ=255) gactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTCCCCGATGAGTGCAAACTTTCACaa > 2:497103‑M1/40‑68 (MQ=255) aaatctgccgtcatcgacttcgaaggttcgaatCCTTCCCCGATGAGTGCAAACTTTCACAATCTCAc > 2:329623‑M1/34‑68 (MQ=255) atctgccgtcatcgacttcgaaggttcgaatCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCg > 2:1290741‑M1/32‑68 (MQ=255) atctgccgtcatcgacttcgaaggctcgaacCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCg > 2:1318588‑M1/32‑68 (MQ=255) tcgaatcgaaTCTTAGTCGAAGGTTCTCACCTTTCCCCGATGAGTGCATACTTTCTCAATCTCTccta < 1:216183/68‑3 (MQ=255) tcgaagcgaaCCTTTGTCGAAGTTTATCACCCTTCCACGAGGATTGCAAACTTTCACAATCTCAcata < 2:1220766/68‑4 (MQ=255) gaaCCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTAcc < 1:1375056/68‑1 (MQ=255) ccTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACcaca > 1:295012/1‑68 (MQ=255) ccTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACATTCACAATCTCACCGAAGTTACcacg > 2:24991/1‑67 (MQ=255) cGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCtgt < 1:402113/68‑1 (MQ=255) gttcgattCCTTCCCCGATGAGGGCAAACTTTCACTATCTCACCGAAGTTACCACATCGCTGCGGTGa > 2:323633‑M1/9‑68 (MQ=255) gttcgaatCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGa > 2:200745‑M1/9‑68 (MQ=255) gTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGa < 2:613337/68‑1 (MQ=255) gTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGa < 1:526867/68‑1 (MQ=255) atCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTAtg > 1:1231746‑M1/3‑68 (MQ=255) cccTTCCCCGATGAGTGCAAACTTTCACTATCTCACAGAAGTTACCACATCGCTGTGGTGAATTAtgg > 1:992979/1‑68 (MQ=255) cccTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTAtgg > 1:1416093/1‑68 (MQ=255) cccTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGATACCACATCGCTGTGGTGAATTAtgg > 2:1473886/1‑68 (MQ=255) CCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTAtggt > 1:905957‑M1/1‑68 (MQ=255) | GGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGT > NC_000913/1287408‑1287541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |