| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3927429 | 19 (0.490) | 5 (0.160) | 4/106 | 2.8 | 23.5% | coding (275/993 nt) | asnA | asparagine synthetase A |
| ? | NC_000913 | = 3927444 | 17 (0.540) | coding (290/993 nt) | asnA | asparagine synthetase A | |||||
GTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3927359‑3927429‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgaagggctTTCATGTGCGTGTACAGCCCTTCGCCCGCGCTGAAGTCGTGTTGCCCTAAGGTCTGACGTTTCCA < NC_000913/3927444‑3927380 GTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGCAGG > 2:781348/1‑68GTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGG < 1:1225103/68‑1GTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGG > 1:1463690/1‑68GTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGG > 1:164715/1‑68GTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGG > 1:882637/1‑68GTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGG > 1:968822/1‑68 GTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCATCACGACTTCAGCGCGTGCGAAGGGCT < 1:1380086/68‑1 GTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCT < 2:391810/68‑1 GTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCT < 2:1463685/68‑1 GCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTTTCATGTGCGTG < 1:970951/68‑1 TCAGACCTTAGGGCAACACGACTTCAGCGCGGGGGGAGGGCGTTCATGTGCGTGTACAGCCCTTCGgc > 1:1282785/1‑66 TCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTTTCATGTGCGTGTACAGCCCTTCGCC > 1:1284627/1‑68 ACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTTTCATGTGCGTGT > 2:1296514/1‑51 ACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTTTCATGTGCGTGT < 1:1296518/51‑1 GGCTTTCATGTGCGTGTACAGCCCTTCGCCCGCGCTGAAGTCGTGTTGCCCTAAGGTCTGACGTTTCC > 1:1296099/1‑68 tCTTTCATTTGCGTGTACAGCCCTTCGCCCGCGCTGAAGTCGTGTTGCCCTAAGGGCTGACGTTTCCA < 1:518816/67‑1 GCTTTCATGTGCGTGTACAGCCCTCCGCCCGCGCTGAAGTCGGGTTGCCCTAAGGTCTGACGTTTCCA < 2:759242/68‑1 GTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3927359‑3927429‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgaagggctTTCATGTGCGTGTACAGCCCTTCGCCCGCGCTGAAGTCGTGTTGCCCTAAGGTCTGACGTTTCCA < NC_000913/3927444‑3927380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |