| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3927429 | 19 (0.490) | 5 (0.160) | 4/106 | 2.8 | 23.5% | coding (275/993 nt) | asnA | asparagine synthetase A |
| ? | NC_000913 | = 3927444 | 17 (0.540) | coding (290/993 nt) | asnA | asparagine synthetase A | |||||
GTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATG > NC_000913/3927362‑3927494 | gTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCATCACGACTTCAGCGCGTGCGAAGGGCT < 1:1380086‑M1/68‑1 (MQ=255)gTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCT < 2:1463685‑M1/68‑1 (MQ=255)gTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCT < 2:391810‑M1/68‑1 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt < 2:1454282/68‑1 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt < 1:33688/68‑1 (MQ=255) tcattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGt < 1:260214/68‑1 (MQ=255) cattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTa < 1:441005/68‑1 (MQ=255) cattcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTa < 1:478554/68‑1 (MQ=255) attcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTac > 1:1451313/1‑68 (MQ=255) tcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTacgc > 1:1366851/1‑66 (MQ=255) tcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTacac > 1:349332/1‑68 (MQ=255) tcaCTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTacac > 2:197308/1‑68 (MQ=255) cTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGca < 1:1411511/68‑1 (MQ=255) gCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTttcatgtgcgtg < 1:970951‑M1/68‑13 (MQ=255) gtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATg > 2:763419‑M1/44‑68 (MQ=255) gtcaacatagaccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATg > 1:431089‑M1/44‑68 (MQ=255) cGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATg < 1:937815/68‑1 (MQ=255) tGGAAACGTCAGCCCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCAAATGAAaga < 1:518816‑M2/68‑4 (MQ=255) tGGAAACGTCAGACCTTAGGGCAACCCGACTTCAGCGCGGGCGGAGGGCTGTACACGCACATGAAagc < 2:759242‑M2/68‑4 (MQ=255) ggAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAagcc > 1:1296099‑M2/1‑64 (MQ=255) ccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCg < 2:161060‑M1/36‑1 (MQ=255) ccgagtgcaacggagaaagacggtcttcatcgGGGCGAAGGGATGTACACGCACATGAAAGCGCTTCg < 1:1463904‑M1/36‑1 (MQ=255) cgagtgcaacggagaaagacggtcttcatcgGGGCGGAGGGCTGTACACGCACATGAAAGCCCTTCGc < 2:833014‑M1/37‑1 (MQ=255) tCAGACCTTAGGGCAACACGACTTCAGCGCGGGGGGAGGGCGttcatgtgcgtgtacagcccttcggc > 1:1282785‑M1/1‑42 (MQ=255) tCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTttcatgtgcgtgtacagcccttcgcc > 1:1284627‑M1/1‑42 (MQ=255) aGACCTTAGGGCAACTCGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTGCGcccc < 2:560885/68‑1 (MQ=255) aCCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTttcatgtgcgtgt > 2:1296514‑M1/1‑38 (MQ=255) aCCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTttcatgtgcgtgt < 1:1296518‑M1/51‑14 (MQ=255) aCCTTACGCCAACACGACTTCAGCGCCGTCGATGTTCTGTACACGCTCATGCCAGCCCTTCGCCCCGa < 2:1317876/68‑1 (MQ=255) acTTAGGGCAACAAGACTTCACCGCGGGCGAAGGGCGGTACACGCGCAAGAAAGCCCTTCGCCCCGAt > 2:364318/2‑68 (MQ=255) gCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGAcc > 1:1115705/1‑68 (MQ=255) aagacggtcttcatcgGGGCGAAGGGCTGTACACGCACAt > 1:893754‑M1/17‑40 (MQ=255) aagacggtcttcatcgGGGCGAAGGGCTGTACACGCACAt < 2:893749‑M1/24‑1 (MQ=255) aaCACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGt < 1:680624/68‑1 (MQ=255) acGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCtt < 2:1381366/68‑1 (MQ=255) gACTTCAGCGCTGGCTAATGGCTGCACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTtc < 2:1211742/68‑1 (MQ=255) cgcgGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGc > 1:1197298/1‑68 (MQ=255) ggCGAAGGGCTGTACACGCACATGAAagcccttcgcccgcgctgaagtcgtgttgccctaaggtctga > 1:1284627‑M2/1‑26 (MQ=255) gccgaAGGGCTGTACACGCACATGAAcgccctccccccgcgctgaagtcgtgttgccctaaggtctga > 1:1282785‑M2/3‑26 (MQ=255) GGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGt > 2:1388743‑M1/1‑51 (MQ=255) GGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGt < 1:1388748‑M1/51‑1 (MQ=255) GCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCg > 1:841672‑M1/1‑68 (MQ=255) CGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg > 1:28904‑M1/1‑68 (MQ=255) CGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCgg > 2:720004‑M1/1‑68 (MQ=255) GAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGt > 1:781353‑M1/1‑68 (MQ=255) GGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTa < 1:525367‑M1/68‑1 (MQ=255) ggCTttcatgtgcgtgtacagcccttcgcccgcgctgaagtcgtgttgccctaaggtctgacgtttcc > 1:1296099‑M1/1‑4 (MQ=255) GGCTGTACACGCGCATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTTGGTCTAt < 2:1185017‑M1/68‑1 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt > 1:1442962‑M1/1‑68 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt > 2:518813‑M1/1‑68 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt < 1:650140‑M1/68‑1 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt > 2:1451308‑M1/1‑68 (MQ=255) GGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTAt < 1:968091‑M1/68‑1 (MQ=255) tctttcatttgcgtgtacagcccttcgcccgcgctgaagtcgtgttgccctaagggctgacgtttcca < 1:518816‑M1/67‑66 (MQ=255) gCTttcatgtgcgtgtacagccctccgcccgcgctgaagtcgggttgccctaaggtctgacgtttcca < 2:759242‑M1/68‑66 (MQ=255) | GTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATG > NC_000913/3927362‑3927494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |