| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2275832 = | 42 (1.080) | 5 (0.150) | 5/114 | 2.6 | 13.2% | coding (560/1026 nt) | yejE | microcin C ABC transporter permease |
| ? | NC_000913 | 2275868 = | 29 (0.850) | coding (596/1026 nt) | yejE | microcin C ABC transporter permease | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAT > NC_000913/2275768‑2275898 | ccgacctgactcatccagccattcatgacagtaattgccagcagccacctgaagttaggctgttcgac > 1:625346‑M1/65‑68 (MQ=255)ccgaccagactcatccagccaaacaagacagtaattgccagcagccaccagaatttaggctgtacgac > 1:319805‑M1/65‑68 (MQ=255)ccgaccagactcatccagccaaacaagacagtaattgccagcagccaccagaagttagtctgtacgac > 1:226405‑M1/65‑68 (MQ=255)ccgaccagactcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgtacgac < 2:840045‑M1/4‑1 (MQ=255)ccgaccagactcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgtacgac > 1:1230590‑M1/65‑68 (MQ=255) gCTATTACGGCGGTAAAGTCGATCTCTGGGGACACCGCTTTATTGAAGTATGGTCGGGGATGCCGACg > 1:531940/1‑68 (MQ=255) gCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTATATTGAAGTATGGTCGGGGATGccgccg > 2:1450139/1‑68 (MQ=255) accagactcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgttCGACGCt > 1:877956‑M1/62‑68 (MQ=255) ccagactcatccagccaaacaagacagtgattgccagcagccaccagaagttaggctgtaCGACGCTg < 1:711856‑M1/8‑1 (MQ=255) aTTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTg < 1:788359/68‑1 (MQ=255) ggcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGttttt > 2:99995/1‑68 (MQ=255) aaaGTCGATCTCTGGGGACTACGCGTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGattat < 1:1213880/68‑1 (MQ=255) aaaGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGattat < 1:1215656/68‑1 (MQ=255) cctaacaagacagtaattgccagcagccaccagaagttaggctgtaCGACGCTGTTTTTGATTAtttt > 1:82501‑M1/47‑68 (MQ=255) tCGATCTCTGGGGACAGCGCTTTAAAGAAGTATGGTCGGGGCTGCCGACGCTGTTTTAGGTTATTTTa > 2:1263936/1‑68 (MQ=255) cGATCTCTGGGGACAACGCTTTATTGAAGTATGGACGGGGATGCCGACGCTGTTTTTGATTATTTTAc > 1:694165/1‑68 (MQ=255) aagacagtaattgccagcagccacaagaagtaaggctgtaCGCCGCTGTTTTTGATTATTTTACTTTc < 2:82500‑M1/28‑1 (MQ=255) tctGGGGACAACGCATTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTcc > 2:1403266/1‑68 (MQ=255) ggggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGc < 1:245987/68‑1 (MQ=255) ggggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGc < 2:1328318/68‑1 (MQ=255) ggggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGc < 1:729426/68‑1 (MQ=255) ggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgt > 1:684544/1‑68 (MQ=255) ggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgt > 2:1445760/1‑68 (MQ=255) ggACAACGCTTTATTGAAGTATGGGCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgt < 1:780701/68‑1 (MQ=255) gACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGtt < 1:744138/43‑1 (MQ=255) gACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGtt > 2:744134/1‑43 (MQ=255) gACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtc > 2:416334/1‑68 (MQ=255) gACAACGCTTTATTGAAGTATGGACGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcggc < 2:694161/68‑3 (MQ=255) aCAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtcg > 2:258283/1‑68 (MQ=255) cAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtcgt < 1:1445765/68‑1 (MQ=255) tgccagcagccaccagaagttaggctgtaCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTAc < 2:781507‑M1/39‑1 (MQ=255) gCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAg > 1:484613/1‑68 (MQ=255) cTTTATTTAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTATCCAGCGTCGTACAGc < 2:496302/68‑1 (MQ=255) cTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGc < 1:99996/68‑1 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGcc < 1:1308815/68‑1 (MQ=255) aTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTaa > 2:711852/1‑68 (MQ=255) tGAATTATGGGCTGTTATTCCGACTCTGTTTTTGATTATTTTACATTCCAGCGTCGCACAGCCTTACt < 1:206473/68‑1 (MQ=255) aaGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTc < 1:1403271/68‑1 (MQ=255) aGTATGGTCGGGGATGCCGCCGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCt > 1:595939/1‑68 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCt > 2:370796/1‑68 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCt > 1:540834/1‑68 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCt > 1:542878/1‑68 (MQ=255) tATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGc < 2:284195/57‑1 (MQ=255) tATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtgg > 2:535699/1‑68 (MQ=255) tATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtgg > 2:1200063/1‑68 (MQ=255) tATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtgg > 2:1022985/1‑68 (MQ=255) tATGGTCGGGGATGCCGACGCTGATTTTGATTATTTTACTTTCCAGCGTCGTACAGc > 1:284197/1‑57 (MQ=255) gTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTGCAGCCTAACTTCTGGTGgc > 1:532042/1‑68 (MQ=255) gctgtaCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg < 1:769942‑M1/62‑1 (MQ=255) gATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:1242333/68‑1 (MQ=255) gATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg > 2:1281285/1‑68 (MQ=255) gATGCCGACGCTGGTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 2:531937/68‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGc > 1:1259323/1‑68 (MQ=255) aCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAt < 2:389420‑M1/67‑1 (MQ=255) | GGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAT > NC_000913/2275768‑2275898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |