| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 243009 | 36 (0.930) | 9 (0.260) | 6/116 | 2.3 | 20.2% | coding (295/2445 nt) | fadE | acyl coenzyme A dehydrogenase |
| ? | NC_000913 | = 243192 | 39 (1.130) | coding (112/2445 nt) | fadE | acyl coenzyme A dehydrogenase | |||||
AGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGA > NC_000913/243126‑243254 | aGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGCCCAGCACCGCCg < 2:262251‑M2/68‑2 (MQ=255) tAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagg > 1:284051‑M2/1‑64 (MQ=255) aTGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcg < 1:93956‑M2/68‑8 (MQ=255) aTGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcg > 1:792232‑M2/1‑61 (MQ=255) aTGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcg > 1:318120‑M2/1‑61 (MQ=255) aTGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcg > 2:1326325‑M2/1‑61 (MQ=255) ggCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGCCCAGCAACGCCGAGggcggc > 2:1392597/1‑68 (MQ=255) ggCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGggcggc > 2:602712/1‑68 (MQ=255) ggCACGAGGATAATGGAAAGAGGCACAAGTACCCACGCCGACCACAGAACAGCACCGCCGAGggcggc > 1:112246/1‑68 (MQ=255) cACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTg < 2:479060/68‑1 (MQ=255) cACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTg < 2:477528/68‑1 (MQ=255) aCGAGGATAATGGCCAGAGGCACCTGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGt < 2:397439/68‑1 (MQ=255) aCGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGt < 2:93955/68‑1 (MQ=255) aCGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGt < 2:537622/68‑1 (MQ=255) ggCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaa > 2:186143‑M2/1‑45 (MQ=255) ggCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCa > 1:1453147/1‑68 (MQ=255) gCCAGAGGCACCAGTACCCACGCCGCCCACAGCCCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCaa > 2:770072/1‑68 (MQ=255) ccAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCaaa < 1:489515/68‑1 (MQ=255) ccAGAGGCACCAGCACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCaaa < 2:202661/68‑1 (MQ=255) agGCGCCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCa > 2:282622/1‑68 (MQ=255) ggCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAg > 2:953115/1‑68 (MQ=255) aCCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactgg > 2:10788‑M2/1‑35 (MQ=255) aCCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactgg > 2:852561‑M2/1‑35 (MQ=255) aCCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactgg > 2:36599‑M2/1‑35 (MQ=255) aCCAGTACCCACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactgg > 2:1322007‑M2/1‑35 (MQ=255) cAGTACCCACGCCGACCACCGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGActgc < 1:262253/68‑1 (MQ=255) cAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGActgc < 2:112245/68‑1 (MQ=255) aGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGActgct < 2:802098/68‑1 (MQ=255) aGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGActgct < 1:1400915/68‑1 (MQ=255) gTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGActgct > 2:698671/1‑67 (MQ=255) gTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGActgct < 1:698675/67‑1 (MQ=255) tACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGa < 1:997315/68‑1 (MQ=255) cccACGCCGACAACAGACCATCAACGCCGAGTGCGTCTGTCCAGGCGAGCAAATTCTGACTGCTGata < 2:1342456/68‑1 (MQ=255) ccACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGataa > 1:700073/1‑68 (MQ=255) ccACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGataa > 2:279933/1‑68 (MQ=255) cACGCCGACCACAGACCAGCAACGCCgagggcgacttgttccagggcaagccggactggaaaaagctg > 2:547893‑M2/1‑26 (MQ=255) cGCCGACCACAGACCAGCACCGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGataaata > 2:342342/1‑68 (MQ=255) cGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGataaata > 2:1296338/1‑68 (MQ=255) cGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGataaata > 2:1116087/1‑68 (MQ=255) gACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCt < 1:847750/68‑1 (MQ=255) cacaGACCAGCTACGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactat > 2:979360‑M2/1‑17 (MQ=255) acaGACCAGCAACGCCgagggcgacttgttccagggcaagcctgactggaaaaagctgcataactatc > 1:322646‑M2/1‑16 (MQ=255) acaGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCAcg < 2:135717/68‑1 (MQ=255) acaGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCAcg < 1:282624/68‑1 (MQ=255) caGACAAGCAACGCCGAGGGCGGCAGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCCcgc > 2:172519/1‑68 (MQ=255) ccAGCTACGCCGAGGGCGGCGGTCCAGGCGAGCAAAATCAGTCTGCTTATAAATATGCTCACGCGGTg < 2:981012/68‑1 (MQ=255) ccAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTg < 2:1111634/68‑1 (MQ=255) ccAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTg < 1:810283/68‑1 (MQ=255) aGCAACGCCGAGGGCGGCTGTCCATGCTAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGAt < 2:1415839/68‑1 (MQ=255) aGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGAt < 2:1017580/68‑1 (MQ=255) gCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATa > 2:731375/1‑68 (MQ=255) aaCGCCgagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcg > 2:618948‑M2/1‑6 (MQ=255) aaCGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGa < 1:717241/68‑1 (MQ=255) aaCGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGa > 1:584527/1‑68 (MQ=255) | AGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGATAGA > NC_000913/243126‑243254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |