New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1683535 =	20 (1.000)	4 (0.230)	3/114	1.7	24.1%	coding (654/1302 nt)	rstB	sensory histidine kinase of RstAB two‑component system
	?	NC_000913	1683597 =	8 (0.470)					coding (716/1302 nt)	rstB	sensory histidine kinase of RstAB two‑component system

TCGATAACGCAGGCGCACTAACGGTGTTCGCAGTTCGTGAGCGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1683580‑1683535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgagcgataACCTGAGCGCCGCCGAATCCCAGGCGTTGAATCGTGATATCAGTCAACTTGAAGCTTTAATTGAAGA  >  NC_000913/1683597‑1683663                                                                                                                   TCGATAACGCAGGCGCACTAACGGTGATCGCAGTTCGTGAGAGATAACCTGCGCGCCGCCGAATCCCA                                               >  2:715290/1‑68           agtCGCACTAACGGTGTTCGCAGTTCGTGAGCGATAACCTGAGCGCCGCCGAATCCCAGGCGTTGAAT                                     <  1:715289/65‑1               GCACTAACGGTGTTCGCAGTTCGTGAGCGATAACCTGCGCGCCGCCGAATCCCAGGCGTTGAATCG                                   >  2:742928/1‑66               GCACTAACGGTGTTCGCAGTTCGTGAGCGATAACCTGAGCGCCGCCGAATCCCAGGCGTTGAATCG                                   <  1:742927/66‑1                                        tGCGATATCCTGAGCGCCGCCGAATCCCAGTCGTTGAATCGTGATTTCAGTCAACTTGAAGCTTTTAT        <  2:500702/67‑1                                        AGCGATAACCTGAGCGCCGCCGAATCCCAGGCGTTGAATCGTGATATCAGTCAACTTGAAGCTTTAAT        >  2:404748/1‑68                                        AGCGATAACCTGAGCGCCGCCGAATCCCAGGCGTTGAATCGTGATATCAGTCAACTTGAAGCT             >  1:35123/1‑63                                        AGCGATAACCTGAGCGCCGCCGAATCCCAGGCGTTGAATCGTGATATCAGTCAACTTGAAGCT             <  2:35123/63‑1                                           GATAACCTGAGCGCCGCCGAATCCCAGGCGTTGAATCGTGATATCAGTCAACTTGAAGCTTTAATTGA     >  1:496477/1‑68                                              AACCTGAGCGCCGCCGAATCCCAGGCGTTGAATCGTGATATCAGTCAACTTGAAGCTTTAATTGAAGA  <  2:51660/68‑1                                                                                                                   TCGATAACGCAGGCGCACTAACGGTGTTCGCAGTTCGTGAGCGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1683580‑1683535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgagcgataACCTGAGCGCCGCCGAATCCCAGGCGTTGAATCGTGATATCAGTCAACTTGAAGCTTTAATTGAAGA  >  NC_000913/1683597‑1683663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.