New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3798325	21 (1.050)	8 (0.420)	4/126	1.6	26.7%	coding (988/1074 nt)	waaU	lipopolysaccharide core biosynthesis
	?	NC_000913	= 3798516	24 (1.260)					coding (797/1074 nt)	waaU	lipopolysaccharide core biosynthesis

ACTTAATCTCTTTACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3798257‑3798325 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacCATTTGATGAGTTTATTTATACCGTTGCGTTGACCAAGTA  <  NC_000913/3798516‑3798477                                                                                                               ACTTAATCTCTTTACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATA                                           <  1:456906/68‑1 ACTTAATCTCTTTACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATA                                           >  2:597713/1‑68                                      TCGATATCTTTTACCGTATATGTTGGGGATACCATTTGATGAGTTTATTTATACCGTTGCGTTGACCA      <  2:222668/68‑1                                       CGATATCTTTTACCGTATATGTTGGGGATACCATTTGATGAGTTTATTTATACCGTTGCGTTGACCAA     <  1:14336/68‑1                                        GATATCTTTTACCGTATATGTTGGGGATACCATTTGATGAGTTTATTTATACCGTTGCGTTGAACAAG    <  1:195890/68‑1                                          TATCTTTTACCGTATATGTTGGGGATACCATTTGATGAGTTTATTTATACCGTTGCGTTGACCAAGTA  >  2:358834/1‑68                                          TATCTTTTACCGTATATGTTGGGGATACCATTTGATGAGTTTATTTATACCGTTGCGTTGACCAA     >  1:183526/1‑65                                          TATCTTTTACCGTATATGTTGGGGATACCATTTGATGAGTTTATTTATACCGTTGCGTTGACCAA     <  2:183526/65‑1                                          TATCTTTTACCGTATATGTTGGGGATACAATTTGATGAGATTAATTATAACGTTGCGTTGACCAAGTA  >  2:195890/1‑68                                          TATCTTATACCGTATATGTTGGGGATACCATTTGATGAGTTTATTTATACAGTTGAGATGAACAAGTA  >  2:14336/1‑68                                                                                                               ACTTAATCTCTTTACTGAATTAGTTAAAGTTTCAGTATCGATATCTTTTACCGTATATGTTGGGGATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3798257‑3798325 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacCATTTGATGAGTTTATTTATACCGTTGCGTTGACCAAGTA  <  NC_000913/3798516‑3798477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.