New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 243009	12 (0.600)	4 (0.220)	3/118	1.8	24.5%	coding (295/2445 nt)	fadE	acyl coenzyme A dehydrogenase
	?	NC_000913	= 243192	14 (0.790)					coding (112/2445 nt)	fadE	acyl coenzyme A dehydrogenase

CGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCAC  >  NC_000913/242950‑243069                                                            |                                                             cgGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAgg                                                      <  1:469865/68‑1 (MQ=255)    cTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAggtgg                                                   <  2:729666/68‑1 (MQ=255)          aTAGTTATGCAGCTTTTTCCAGTCCGGCTTGCACTGGAACAAGTCGACCTCCCACCAGGTGGTGCCCg                                             >  2:639451/1‑68 (MQ=255)            aGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCa                                           <  2:666826/68‑1 (MQ=255)                   cAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCggcgttgctggtctgtggtcggcgtg                                    >  1:464149‑M1/1‑42 (MQ=255)                      cTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGctt                                 <  2:243309/68‑1 (MQ=255)                      cTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGctt                                 <  2:399633/68‑1 (MQ=255)                            ccAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCggcgttgctggtctgtggtcggcgtgggtactggt                           >  1:713246‑M1/1‑33 (MQ=255)                              aGTCCGGCTTGCCCAGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCAATCTCa                         >  1:211260/1‑68 (MQ=255)                                tCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGt                       >  2:572314/1‑68 (MQ=255)                                 ccGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTg                      >  2:584636/1‑68 (MQ=255)                                      ttGCCCTGGAACAAGTCGCCCTCggcgttgctggtctgtggtcggcgtgggtactggtgcctctggcc                 >  1:185785‑M1/1‑23 (MQ=255)                                      ttGCCCTGGAACAAGTCGCCCTCggcgttgctggtctgtggtcggcgtgggtactggtgcctctggcc                 >  1:508638‑M1/1‑23 (MQ=255)                                           cTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATcg            <  2:441861/68‑1 (MQ=255)                                                     tCGCTCTCCCACCAGGTGGTGCCCGCAGCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATctc  <  1:639450/68‑3 (MQ=255)                                                     tCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCAc  >  2:104876/1‑68 (MQ=255)                                                            |                                                             CGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCAGTGCGCGACATCGGCGGCATCAC  >  NC_000913/242950‑243069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.