| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3408870 | 12 (0.600) | 4 (0.230) | 4/116 | 1.4 | 32.6% | coding (1264/1452 nt) | panF | pantothenate:sodium symporter |
| ? | NC_000913 | = 3408895 | 6 (0.340) | coding (1289/1452 nt) | panF | pantothenate:sodium symporter | |||||
GGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATCGTTGGCGGCGTGCTGTATGCCGTACTCGCGACGCTGAATAT > NC_000913/3408807‑3408937 | ggTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGcgccaacgccaa > 1:426141/1‑68 (MQ=255) tGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGatcatc > 1:330429‑M1/1‑62 (MQ=255) gggCTGGAAGCCGGTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGCCAAAgg < 1:507979/68‑1 (MQ=255) ccGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGt < 2:61597/68‑1 (MQ=255) ccGTTTTCCTGTGGCCGCTGGTGCTGGGCCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAgc < 1:395151/68‑2 (MQ=255) gTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGatcatcgcacttagcgcgc < 2:330429‑M1/68‑20 (MQ=255) cTGTGGCCGCTGGTGCTGGGTCGTTAGTGGGAACGCGCCAACGCCAAAGGCGCGCTGAGTGCgatgat < 1:515138/68‑1 (MQ=255) tgtgGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATc < 1:190554‑M2/68‑2 (MQ=255) gtgGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATcg > 1:523005‑M2/1‑66 (MQ=255) cGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATcgttggc > 2:751473‑M2/1‑61 (MQ=255) cGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATcgttggc > 2:750641‑M2/1‑61 (MQ=255) cGCTGGTGCGGGGGCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATcgttggc > 2:567311‑M2/1‑61 (MQ=255) gCTGGGTCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATCGTTGGCGGCGTGc < 1:354986/68‑1 (MQ=255) tACTGGGAACGCGCCAACGatcatcgcacttagcgcgcc > 1:68654‑M1/1‑19 (MQ=255) tACTGGGAACGCGCCAACGatcatcgcacttagcgcgcc < 2:68654‑M1/39‑21 (MQ=255) tACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCgatga > 1:73475/1‑43 (MQ=255) tACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCgatga < 2:73475/43‑1 (MQ=255) aCTGTGATCGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATCGTTGGCGGCGTGCTGTATGCCGTa < 1:618736/68‑1 (MQ=255) aCTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATCGTTGGCGGCGTGCTGTATGCCGTa < 1:83351/68‑1 (MQ=255) cgcgCCAACGCCAAAGGCGCGCTAAGTGCGATGATCGTTGGCGGCGTGCTGTATGCCGTACTCGCGAc < 2:674391/68‑1 (MQ=255) gcCAACGatcatcgcacttagcgcgcctttggcgttggcgcgttcccagtaaagcccccgcaccagcg > 2:567311‑M1/1‑7 (MQ=255) gcCAACGatcatcgcacttagcgcgcctttggcgttggcgcgttcccagtaaagacccagcaccagcg > 2:750641‑M1/1‑7 (MQ=255) gcCAACGatcatcgcacttagcgcgcctttggcgttggcgcgttcccagtaaagacccagcaccagcg > 2:751473‑M1/1‑7 (MQ=255) ccaacgccaaAGGCGCGCTAAGTGCGATGATCGTTGGCGGCGTGCTGTATGCCGTACTCGCGACGCTg > 1:312734/1‑68 (MQ=255) cGatcatcgcacttagcgcgcctttggcgttggcgcgttcccagtaaagacccagcaccagcggccac > 1:523005‑M1/1‑2 (MQ=255) gatcatcgcacttagcgcgcctttggcgttggcgcgttcccagtaaagacccagcaccagcggccaca < 1:190554‑M1/68‑68 (MQ=255) | GGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATCGTTGGCGGCGTGCTGTATGCCGTACTCGCGACGCTGAATAT > NC_000913/3408807‑3408937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |