| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4153821 = | 27 (1.040) | 5 (0.220) | 4/114 | 1.8 | 20.3% | coding (1027/1152 nt) | argE | acetylornithine deacetylase |
| ? | NC_000913 | 4154127 = | 16 (0.720) | coding (721/1152 nt) | argE | acetylornithine deacetylase | |||||
AACCGTGTTTCCAGATATTCATCAGGTTGATGAGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACAGTAGTTCACCACTTCGGTTTTTGCTCCGAG > NC_000913/4153754‑4153887 | aaCCGTGTTTCCAGATATTCATCAGGTTGATGAGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGt < 2:642282/68‑1 (MQ=255) ccGTGTTTCCAGATATTCATCAGGTTGATGAGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCg > 1:740569/1‑68 (MQ=255) cGTGTTTCCAGATATTCATCAGGTTGATGAGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCgg > 2:83289/1‑68 (MQ=255) gtgtTTCCAGATATTCATCAGGTTGATGAGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCggg < 2:645276/68‑1 (MQ=255) gcgataacctgaaagaacgttatcactacgaagcgtttaccgtgccataccctacgctcaaccTCggg > 2:909762‑M1/64‑68 (MQ=255) taacctgaaagaacgttatcactacgaagcgtttaccgtgccataccctacgctcaaccTCGGGCATa > 2:527910‑M1/60‑68 (MQ=255) cAGATATTCATCAGGTTGAGGAGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACg < 2:334689/68‑1 (MQ=255) atcatcaGGTTGATGAGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGaa < 2:952909/67‑1 (MQ=255) gTTGATGAGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGgc > 1:457457/1‑68 (MQ=255) gatgaGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCt < 2:241861/68‑1 (MQ=255) tgaGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTc < 2:896596/68‑1 (MQ=255) gaGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCg < 1:935093/68‑1 (MQ=255) gaGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCg > 2:102085/1‑68 (MQ=255) gaGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCg > 2:463032/1‑68 (MQ=255) gCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGt < 2:496054/68‑1 (MQ=255) gCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGt < 2:336226/68‑1 (MQ=255) aTTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACagt < 2:513510/68‑1 (MQ=255) aTTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACagt < 1:265209/68‑1 (MQ=255) ttAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACagta > 2:580337/1‑68 (MQ=255) ttAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACagta < 1:20273/68‑1 (MQ=255) ccgtgccataccctacgctcaaccTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACAGTAGTTc < 1:47331‑M1/44‑1 (MQ=255) ccgtgccataccctacgcacaaccTCGGGCATAACGTTTGAATAAACGGCGCTACGGTACAGTAGTTc < 2:452861‑M1/44‑1 (MQ=255) tGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATTAACGGAGCTTCGGTACAGTAGTTca > 1:650580/1‑68 (MQ=255) tGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACAGTAGTTcg > 1:216289/1‑67 (MQ=255) tGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACAGTAGTTca > 2:720358/1‑68 (MQ=255) tGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACAGTAGTTca > 1:12177/1‑68 (MQ=255) cgtgccataccctacgctcaaccTCGGGCATAACGTTTGAATAAACGGCGCTTc < 2:818625‑M1/31‑1 (MQ=255) cgtgccataccctacgctcaaccTCGGGCATAACGTTTGAATAAACGGCGCTTc > 1:818628‑M1/24‑54 (MQ=255) gccataccctacgctcaaccTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACAGTAGTTcacca > 1:863637‑M1/21‑68 (MQ=255) ccggCCCCACCACCAGCGTCGGGCATAACGATTGAATAAACGGCGCTTCGGTACAGAAGATccccaca > 2:212441/3‑67 (MQ=255) cAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAACCGGCGCTTCGGTACAGTAGTTcaccacg > 2:13796/1‑67 (MQ=255) cGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACAGTAGTTCACCACTTCGGTTTTTGCTCCGa > 1:593848/1‑68 (MQ=255) cGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACAGTAGTTCACCACTTCGGTTTTTGCTCCGa < 1:963593/68‑1 (MQ=255) gTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACAGTAGTTCACCACTTCGGTTTTTGCTCCGAg > 2:547937/1‑68 (MQ=255) | AACCGTGTTTCCAGATATTCATCAGGTTGATGAGCCTGATTAATTGAGCCAGGCCCCAACACCAGCGTCGGGCATAACGTTTGAATAAACGGCGCTTCGGTACAGTAGTTCACCACTTCGGTTTTTGCTCCGAG > NC_000913/4153754‑4153887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |