| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4153821 = | 27 (1.040) | 5 (0.220) | 4/114 | 1.8 | 20.3% | coding (1027/1152 nt) | argE | acetylornithine deacetylase |
| ? | NC_000913 | 4154127 = | 16 (0.720) | coding (721/1152 nt) | argE | acetylornithine deacetylase | |||||
ATCCATATGCAACTCACAGCAAGCGCAAATACGGTTAGAAGCGTCGCCACCGTGAATATGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTTATCGCGCAAT > NC_000913/4154062‑4154194 | atCCTTATGCAACTCACAGCAAGCGCTATTACGGTTAGAAGCGTCGCCACCTTGAATATGCCCGAGGt < 2:529597/68‑1 (MQ=255)atCCATATGCAACTCACAGCAAGCGCAAATACGGTTAGAAGCGTCGCCACCGTGAATATGCCCGAGGt > 2:868390/1‑68 (MQ=255) atatGCAAATCACAGAAAGCGCAAATACGGTTAGAAGAGTCGCCACCGTGAATATGACAGAGGTTGAg > 1:962132/1‑68 (MQ=255) tatGCATCTCACAGCTAGCGCAAATACGGCTAGAAGCGTCGCCACCGTGAATATGCCCGAGGTTGAGc < 2:12177/68‑1 (MQ=255) tatGCAACTCACAGCAAGCGCAAATACGGTTAGAAGCGTCGCCACCGTGAATATGCCCGAGGTTGAGc > 1:911336/1‑68 (MQ=255) atGAAACTAACAGCAAGCGCAAAAACGGTTAGAAGCGTCGACACAGTTAATATAACAGAGATTGAGCg > 2:488949/1‑68 (MQ=255) aaCTCACAGCAAGCGCAAATACGGTTAGAAGCGTCGCCACCGTGAATATGCCCGAGGTTGAGCGTAgg < 2:750983/68‑1 (MQ=255) aaCTCACAGCAAGCGCAAATACGGCTAGAAGCGTCGCCACCGTGAATATGCCCGAGGTTGAGCGTAgg < 2:884899/68‑1 (MQ=255) tggtgaactactgtaccgaagcgccgtttattcaaacgttatgcccgaGGTTGAGCGTAGGGTATGGc > 1:863637‑M2/49‑68 (MQ=255) gaactactgtaccgtagcgccgtttattcaaacgttatgcccgaGGTTGTGCGTAGGGTATGGCACgg < 2:452861‑M2/24‑1 (MQ=255) gaactactgtaccgaagcgccgtttattcaaacgttatgcccgaGGTTGAGCGTAGGGTATGGCACgg < 1:47331‑M2/24‑1 (MQ=255) aGCGCAAATACGGTTAGAAGCGTCGCCACCGTGAATATGCCCGAGGTTGAGCGTAGTGTATGGCACgg < 2:91309/68‑1 (MQ=255) aGCGCAAATACGGCTAGAAGCGTCGCCACCGTGAATATGCCCGAGGTTGAGCGTAGGGTATGGCACgt < 1:212441/68‑2 (MQ=255) gaagcgccgtttattcaaacgttatgcccgaGGTTGAGCGTAGGGTATGGCACg > 1:818628‑M2/32‑54 (MQ=255) gaagcgccgtttattcaaacgttatgcccgaGGTTGAGCGTAGGGTATGGCACg < 2:818625‑M2/23‑1 (MQ=255) cACCGTTAATATGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCt < 2:840172/68‑1 (MQ=255) cACCGTGAATTTGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCt < 1:696988/68‑1 (MQ=255) cACCGTGAATATGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCt > 2:36256/1‑68 (MQ=255) ccGTGAATATGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCttt < 2:593848/68‑1 (MQ=255) atatGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGtt > 1:616810/1‑68 (MQ=255) atatGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGtt > 1:552774/1‑68 (MQ=255) tatgcccgaGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTTa > 2:527910‑M2/10‑68 (MQ=255) cccgaGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTTATcgc > 2:909762‑M2/6‑68 (MQ=255) ggTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTTATCGCGCAAt > 1:501206/1‑68 (MQ=255) | ATCCATATGCAACTCACAGCAAGCGCAAATACGGTTAGAAGCGTCGCCACCGTGAATATGCCCGAGGTTGAGCGTAGGGTATGGCACGGTAAACGCTTCGTAGTGATAACGTTCTTTCAGGTTATCGCGCAAT > NC_000913/4154062‑4154194 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |