New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1307027 =7 (0.270)3 (0.130) 3/114 2.2 22.2% coding (124/330 nt) yciU UPF0263 family protein
?NC_000913 1307124 = 15 (0.670)coding (27/330 nt) yciU UPF0263 family protein

TCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATC  >  NC_000913/1306966‑1307093
                                                             |                                                                  
tCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAg                                                              <  1:286999/68‑1 (MQ=255)
 acgtcgccaacagaggttaaacaggtagtaactatggatatggatctaaacaatcgcctgACTGAAGa                                                             <  2:604982‑M1/8‑1 (MQ=255)
     aTGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGa                                                         <  2:837450/68‑1 (MQ=255)
        ttCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAAca                                                      <  2:310368/68‑1 (MQ=255)
          ccTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAAcagc                                                    <  1:825078/68‑1 (MQ=255)
               cAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAAc                                               <  1:805879/68‑1 (MQ=255)
                         ccgGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGa                                     <  1:901556/68‑1 (MQ=255)
                            gtaactatggatatggatctaaacaatcgcctgACTGAAGATTGAACAGCAGAACATCAGCTGGATCg                                  >  2:51019‑M1/34‑68 (MQ=255)
                             taactatggatatggatctaaacaatcgcctgACTGAAGATTGAACAGCAGAACATCAGCTGGATCga                                 <  1:654046‑M1/36‑1 (MQ=255)
                                             ccgccgcGCTCGTCGAACTGAAGATTGAACAGAAGAGCATCAGCTGGATCGAGATTGTGGgcaggcag                 >  2:303869/1‑68 (MQ=255)
                                                            gACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGAGTGTCGGCAGCCAGCTCGAGAAAAATATc  >  2:654046‑M1/2‑68 (MQ=255)
                                                             |                                                                  
TCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATC  >  NC_000913/1306966‑1307093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.