| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1307027 = | 7 (0.270) | 3 (0.130) | 3/114 | 2.2 | 22.2% | coding (124/330 nt) | yciU | UPF0263 family protein |
| ? | NC_000913 | 1307124 = | 15 (0.670) | coding (27/330 nt) | yciU | UPF0263 family protein | |||||
GATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGT > NC_000913/1307057‑1307183 | gatatttttctcgagctggctgccgacactctcgatccagctgatgttctgctgttcaatcttcagtc > 2:654046‑M2/68‑68 (MQ=255) gTCGGCCGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGt < 2:735754/68‑1 (MQ=255) gTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGt < 2:16450/68‑1 (MQ=255) cGGCAGCCAGTTCGAGAAAAATATCGTAGGCCGGTTAAAGCGTGTCATATTCAGTCAGGCGAATGttt > 1:387279/1‑68 (MQ=255) aGCCAGTTCGAGTAAATAATCTTAGGCCTGTTCAAGCGGTTCATCTTCAGGCAGGCTATTGTTTAGat < 2:343242/68‑1 (MQ=255) gagaAAAATATCATAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGTTTAGatccatatcca < 2:727855/68‑1 (MQ=255) aaaaTATCGTAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGt < 2:310786/68‑1 (MQ=255) aaaaTATCGTAGGCCTGTTCAAGCGCTCCATCTTCAGTCAGGCGATCGCCTAGACCCATATCCATAgc < 2:232831/68‑2 (MQ=255) tcgatccagctgatgttctgctgttcaatcttcagtCAGGCGATTGTTTAGATCCATATCCATAGTta < 1:654046‑M2/32‑1 (MQ=255) cgatccagctgatgttctgctgttcaatcttcagtCAGGCGATTGTTTAGATCCATATCCATAGTtac > 2:51019‑M2/36‑68 (MQ=255) atCGTAGGCCTGTTAAAGCGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTtacta > 1:939502/1‑68 (MQ=255) gTAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCg > 1:288114/1‑36 (MQ=255) gTAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCg < 2:288114/36‑1 (MQ=255) ccTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTa > 1:334408/1‑68 (MQ=255) ccTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTa > 2:788837/1‑68 (MQ=255) cAAGCGTTTCATCTTCAGTCAGGCGATTGTGTAGATCCATATCCATAGTTACTACCTGTTTAACctct < 2:82926/68‑1 (MQ=255) aGCGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGt > 1:200502/1‑68 (MQ=255) cGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCT‑TGTTgg > 1:931191/1‑68 (MQ=255) tcttcagtCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGt < 2:604982‑M2/60‑1 (MQ=255) | GATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGT > NC_000913/1307057‑1307183 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |