| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2269346 | 3 (0.060) | 47 (1.010) | 40/290 | 0.2 | 94.0% | coding (595/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family |
| ? | CP009273 | 3576788 = | NA (NA) | intergenic (+10/‑55) | yrhA/insA | pseudogene, interrupted by IS1E/IS1 repressor TnpA | |||||
Only 100 of 104 total aligned reads displayed.
GACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCA > CP009273/2269201‑2269490 | gACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggt < 1:441257‑M1/149‑4 (MQ=255) cctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGcc < 1:520208‑M1/16‑1 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCt < 1:447790‑M1/17‑1 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGGCGTACGGCCt < 1:64870‑M1/17‑1 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagatggagtcgttaccCCAGCGTCGTa < 2:205125‑M1/11‑1 (MQ=255) tgaatctggggtaccacctggcacggctgggacggacgaagtagtcattctcaaaatcggtggagctgcatgacaaagtcaacgcgcatttttttaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTa > 1:461349‑M1/132‑149 (MQ=255) tGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCGCTGGGGACCACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCGGTTTTTGGTTATTTTACTTTCCAGCGTCGggtgatgctg > 1:154265‑M1/1‑139 (MQ=255) ttCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTGGGTCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGGTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgtc > 1:225373‑M1/1‑137 (MQ=255) atctgaggcagcacctggcacggctgggacggaactcgcggtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGc > 2:334858‑M1/129‑143 (MQ=255) gaggcagcacctggcacggctgggacggaagtcgctgacgttcgcaaaatcggtggagctgcatgacaaagtcgtcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtg < 1:190112‑M1/25‑1 (MQ=255) cGTGCTGGGCGTGCCGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaactta < 1:325325‑M1/149‑19 (MQ=255) cagcacctggcacggctgggacggaagtcgctgtctttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaatgagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtggtgg > 1:536622‑M1/121‑149 (MQ=255) cagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggtgctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtggtgg > 1:567706‑M1/121‑149 (MQ=255) cagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtggtgg > 1:322741‑M1/121‑149 (MQ=255) aTGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTTCAGGGTCGggtgatgctgccaact > 2:204337‑M1/1‑127 (MQ=255) cggggggcgggcgggggcgcTACGAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaactta < 2:224889‑M1/134‑19 (MQ=255) acctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGgctgc < 1:312313‑M1/33‑1 (MQ=255) ctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTGAAGCCTAACTTCtggtgg < 2:554829‑M1/29‑1 (MQ=255) cGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGCAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgcccacttaccg > 2:194327‑M1/1‑122 (MQ=255) gCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgctttagtgt > 1:463956‑M1/1‑119 (MQ=255) cgggttggacggaagtggctgtctttctcaaaatcggtggggctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggaggcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg > 2:209884‑M1/109‑143 (MQ=255) gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacgCCGGCGTCGTACAGCCTAACTTCTGGTGGCTGTTGGTAGTTAc < 1:299256‑M1/43‑1 (MQ=255) gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGc < 2:197175‑M1/37‑1 (MQ=255) ctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgcacataaaacactatcaatcagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTAGCa < 2:682935‑M1/38‑1 (MQ=255) gggacggaagtcggtgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattctctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCtggccat < 2:430078‑M1/40‑4 (MQ=255) gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAt > 2:601888‑M1/104‑143 (MQ=255) gggCGCTGCAAGGCTATTACGGCGGCAACGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGTCGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgattttgtgtat < 2:243431‑M1/143‑33 (MQ=255) gggCGCTACACGGCTACTGCGGCGGTAATGTCGACCTCCGGGGACAACGCTTTATTGCAGTGTGGTCTGGGTGGCCTACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtat < 2:24084‑M1/143‑33 (MQ=255) ggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcatgaactgaacataaaacacaatcaataagttggagacattaccCCAGCGTCGTACAGCCTAACTCCTGGTGGCTGCTGCCAAtt < 2:340033‑M1/41‑1 (MQ=255) gacggaagtcgctggcgttctcaaaatcggtggagctgcatgacaaagtcatcggacattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTCACTTCTGGTGGCTGCTGGCAGTTa < 2:210571‑M1/42‑1 (MQ=255) ggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGCGTCGTCCAGCCTACCTTTTGGTGGCTGCTGGCAATTACTGTCTTGt < 1:106722‑M1/51‑1 (MQ=255) ggaagccgctgccgttctcaaaatcggtggagtcgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGt > 1:414554‑M1/99‑149 (MQ=255) tACCAGGCCATTACGGCGGTACAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCTACGCTGTTTTTGACTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggt < 2:194577‑M1/143‑39 (MQ=255) tACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttattgatttagtgtatgatggtgttttt < 1:407680‑M1/149‑45 (MQ=255) gtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACGGTCtt < 2:265635‑M1/49‑1 (MQ=255) ctgccgtcctcaaaatccgtgaagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGttt > 2:209792‑M1/91‑143 (MQ=255) tgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGa < 1:164420‑M1/60‑1 (MQ=255) gctcaaaatcggtggagctgcatgacaaagtcatcgggcatgatctgaacataattcacgatcaataagttgtagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGa > 2:423847‑M1/84‑143 (MQ=255) cggcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc > 2:630183‑M1/1‑92 (MQ=255) tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTg < 1:86165‑M1/68‑1 (MQ=255) gcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTCCTTTGCCGCGCCGggtgatgctgccaacttactgatgtagtctttgatggtgtttttgaggtgctc < 2:709081‑M1/143‑54 (MQ=255) cggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttcgtgtacgatggtgtttttgaggtgctcc > 2:100260‑M1/1‑89 (MQ=255) acctgatctCTGGGGACAACGCTTTATTGTAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggc < 2:680944‑M1/139‑61 (MQ=255) aGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt > 1:438233‑M1/1‑83 (MQ=255) gTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt > 1:701137‑M1/1‑82 (MQ=255) tctcTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat < 1:463634‑M1/149‑73 (MQ=255) ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCgtg < 2:237030‑M1/77‑1 (MQ=255) ctGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc > 2:621229‑M1/1‑74 (MQ=255) ctGGGGACAACGACTTATCGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccatcttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag < 1:199883‑M1/149‑76 (MQ=255) gggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg > 1:356940‑M1/1‑71 (MQ=255) gggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg > 1:389095‑M1/1‑71 (MQ=255) ggccaatcttttatttaggtatggttGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgttgctgccaacttactgatttagtgtatgatggtgtttttgaggggccccagtggcttctgtttctatcagctgt < 1:58146‑M1/140‑80 (MQ=255) ggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt < 1:770028‑M1/149‑80 (MQ=255) acaaagtcatcgggcagtatctgaacataaaacactatcagtaagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGTTgcggg > 2:432873‑M1/60‑143 (MQ=255) aCAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagcggcttctgtttctatcagatgtcc > 1:67205‑M1/1‑68 (MQ=255) aCAACGCTTTATTGAAGGATGGCCGGGGGTGCCGACGTTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacctactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag < 2:397635‑M1/143‑76 (MQ=255) caaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGtt < 1:564064‑M1/91‑1 (MQ=255) aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGGGttt < 1:766175‑M1/92‑1 (MQ=255) agtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGa > 2:462217‑M1/56‑143 (MQ=255) cTTTATTGAAGTATGGTCGGGGATGCCGACGCTTGTCTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg < 1:598800‑M1/149‑88 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc > 2:398247‑M1/1‑61 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGATGTTTTTGATGAGTTTACTTTCCAGCGTCGggtgatgctgccaacttactggtttagtgtatgatggtgtttttgaggtgctccagtggcgtctgtttctatgagctgtctctcctgt > 1:190431‑M1/1‑61 (MQ=255) catcgggcattatctgaacatagaacactataaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGtt > 2:324302‑M1/53‑143 (MQ=255) tATTGAAGTATGGTCGGGGATGCCGACGCTGTGTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc < 1:709005‑M1/149‑91 (MQ=255) aTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctccttttca > 1:620372‑M1/1‑58 (MQ=255) ggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTc > 1:301693‑M1/48‑149 (MQ=255) gAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggggtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgt > 2:208102‑M1/1‑55 (MQ=255) cattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAGTTACTGTCTTGTTGGCCTGGATGGGTCTGGTCGGCGTGGTTCGGGCGGAGCTTTTACGt < 2:651829‑M1/98‑1 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc < 2:341040‑M1/143‑91 (MQ=255) gTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcaccaactggtgttttctatcagctgtccctcctgttca < 2:690341‑M1/143‑92 (MQ=255) gTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGACGggtgatgctgccaacttactggtttagtgtatgatggtgtttttgagttgctccagtggcttgtgtttctatcagctgtcccgcctttcacgctact > 1:307216‑M1/1‑52 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacg < 1:757872‑M1/149‑102 (MQ=255) ctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTc < 1:505649‑M1/110‑1 (MQ=255) gaacataaaacactatgaataagttggagacattaccCCAGCGTCGTACCGCCGAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGCCTGGGTGAGTCTGGTCGGCGTGGTGCGGGCGGAGATTTTACGTACTCGTAATTTCGa < 1:500769‑M1/112‑1 (MQ=255) gaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAAATTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGGTGAGTCTGGTCGGCGTGGTGCGGGCGGGGTTTTTACGTACTCGTaa < 2:4636‑M1/106‑1 (MQ=255) aacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGAc < 1:51701‑M1/113‑1 (MQ=255) ataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTc > 2:37669‑M1/34‑143 (MQ=255) aaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTAGCTGGATGAGTCTGGTCGGCGGGGTGCGGGCGGCGTTTTTACGTCATCGTAATTTcgg < 2:540357‑M1/112‑2 (MQ=255) tatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCg < 1:402529‑M1/125‑1 (MQ=255) tatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCg < 1:26017‑M1/125‑1 (MQ=255) gCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacgg < 1:302004‑M1/149‑118 (MQ=255) tGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtggagctactgccggggtggttggtatcggca > 1:171395‑M1/1‑30 (MQ=255) aataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGcac < 1:661001‑M1/129‑1 (MQ=255) caagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGATGCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAg > 1:480160‑M1/19‑149 (MQ=255) ttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTGCGTACTCGTAATTTCGACTACATTCGTGCGGcac < 2:476916‑M1/129‑1 (MQ=255) ttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTCTTTACGTACTCGTCATTTCGACTACATTCGTGCGGcac < 2:389993‑M1/129‑1 (MQ=255) tattTTACGTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgc < 1:732966‑M1/149‑130 (MQ=255) attTTACTTTCCAGCGTCCggttatgcggccaacttaccgatgtagtgtacgatggtgtttttgaggtgctccagtggcttctgtttcgatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgcc < 1:54179‑M1/149‑131 (MQ=255) agtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTgg > 1:196042‑M1/11‑149 (MQ=255) ttttACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtggatgacggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgctgcgtaacggcaaaagcaccgccg < 1:585997‑M1/149‑132 (MQ=255) tttACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctttttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcac > 2:251513‑M1/1‑17 (MQ=255) tcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCGTGGCg < 1:299122‑M1/141‑1 (MQ=255) ttaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTg < 2:431348‑M1/138‑1 (MQ=255) ttaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCAGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTg < 2:229875‑M1/138‑1 (MQ=255) taccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAg > 1:725402‑M1/5‑149 (MQ=255) cTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacat < 1:268912‑M1/149‑137 (MQ=255) ttCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatca < 1:699382‑M1/149‑139 (MQ=255) ccAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGAt < 1:720294/149‑1 (MQ=255) gCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGc > 1:728782/1‑149 (MQ=255) cgtcgtACAGCCTAACTTCCGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGACTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCa < 1:222390/149‑1 (MQ=255) | GACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCA > CP009273/2269201‑2269490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |