| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2825238 = | 48 (1.030) | 3 (0.070) | 3/274 | 7.0 | 6.6% | coding (411/1515 nt) | norR | anaerobic nitric oxide reductase DNA‑binding transcriptional activator |
| ? | CP009273 | 2825280 = | 40 (0.910) | coding (369/1515 nt) | norR | anaerobic nitric oxide reductase DNA‑binding transcriptional activator | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTGTTTCACCGCTTCAAACGGCGTGGCATCGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAGGAATCAAACCGTCATAGGGATCGGGCAATTCGCTG > CP009273/2825097‑2825376 | cTGTTTCACCGCTTCAAACGGCGTGGCATCGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCCCTTCGTCGCTGAAAACATCGAACTGATCgg > 1:451791/1‑149 (MQ=255) tGTTTCCCCGCTTCAAACGGCGTGGCATCGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCggg < 1:607183/149‑1 (MQ=255) tttCACCGCTTCAAACGGCGTGGCATCGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGAt > 2:449161/1‑143 (MQ=255) ttCACCGCTTCAAACGGCGTGGCATCGCCTGGCAGCATATTCTGGCTTTACAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTGGCTCTTCGTCGCTGCAAACATCGAACTGATc > 2:209250/1‑143 (MQ=255) tCACCGCTTCAAACGGCGTGGCATCGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGCTCGGGCTGc > 1:329996/1‑149 (MQ=255) tccGCTTCAGAGGGCGTGGCATCGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCggg < 2:528020/142‑1 (MQ=255) ccGCTTCAAACGGCGTGGCATCGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGGGCAGCAATCAGCCGTAGCTCTTCGTCCCTGAAAACAGCGAACAGCACGGGc > 2:235959/1‑143 (MQ=255) ccGCTTCAAACGGCGTGGCATCGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAAAGCACCGCTCGCCAGCGCAGCCATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGc < 2:150622/143‑1 (MQ=255) ttCAAACGGCGTGGCATCGCCTGGCAGCATATTCTGGATTTCCAGTTGTTCAATCAGCACCGACTTGCTTAACGCTCCCGCCGCCAGCGCAGAGATCAGCCGTAGCTCTTCGTCGCTCGCAACACAGAACGGAACGggcggcc > 2:15496/1‑142 (MQ=255) tCAAACGGCGTGGCATCGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAAGCAGTAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTc < 1:775377/149‑1 (MQ=255) tGGCATCGCCTGGCAGCCTATCTTCGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGc < 2:147590/143‑1 (MQ=255) aTCGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAATCAAAAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTTTTCGTCGATGAAAACATCGAACTAATCGGGCTGCATCCGGACGAGCGTCAGTacgc > 1:352452/1‑149 (MQ=255) tCGCCTGGCAGCATATTCTAGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGcc > 1:574097/1‑149 (MQ=255) cGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTCGCCCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCAAGCGTCAGTGCGCCg > 1:199875/1‑149 (MQ=255) tGGCAGCATATCGTGGCTTGTCAGTTGTTCAATCAGCAACTCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCACCCCGTCGAGCGTCAGTGCGCCG‑ATCa < 1:425211/149‑1 (MQ=255) gcgagcaTATTCTGGCTTTCCAGTTGTTTAGTAAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGTCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAg < 1:93031/146‑1 (MQ=255) gacgcaTATTCTGCCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAgg < 1:236523/146‑1 (MQ=255) agcaTATTCTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑At < 2:634840/143‑1 (MQ=255) cTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCgg < 1:205473/149‑1 (MQ=255) gCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCaa > 1:88982/1‑149 (MQ=255) aGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTAGCCCGGCAAACAATgg < 1:326321/149‑1 (MQ=255) ttCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCCGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGAc > 1:421350/1‑149 (MQ=255) aaTCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑GTCGGGTTTTGCCCGGCAACCAATGGCa > 2:406403/1‑143 (MQ=255) cAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGAc > 2:187784/1‑143 (MQ=255) cAACGCATTGCTTAACGCTCCCGCCGACAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGGCAGTGCGCCG‑ATCAGGGTTTGCCCGGCAAAGCATGGCAGACCAACGCAgc > 1:621942/1‑148 (MQ=255) aaCGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCTGGCGGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAAc < 2:362291/143‑1 (MQ=255) aaCCCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCGCCTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGATCGTCAGTGCGCCG‑ATCAGGTTTTGCTCGGCAAACAATGGCAGACCAAc < 2:44898/143‑1 (MQ=255) aCGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACg > 2:579896/1‑143 (MQ=255) cATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAg < 2:626618/143‑1 (MQ=255) ttAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGa > 2:713656/1‑143 (MQ=255) cTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGActc < 1:606836/149‑1 (MQ=255) cctccgcgccAGCGCAGCAATCAGCCGTTGCTCGTCGTCGCTGAAAACATCGGACTGATCGGGCTGCAGCCCGTCGAGCGTCAGGGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGCCCAACGCAGGCGTGAACCTTCa < 2:261700/137‑1 (MQ=255) ccgccgCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCGGa > 2:513036/1‑143 (MQ=255) cAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGGACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCt < 2:327880/143‑1 (MQ=255) aGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAgg > 1:626049/1‑149 (MQ=255) aGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAgg > 1:455067/1‑149 (MQ=255) agcaATCAGCCGTAGCTCTTCGTCGCTGAAATCATCGAACTGATCGGGTTGCATCTCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAg < 2:243837/143‑1 (MQ=255) gcaATCAGCCGGAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAgg < 2:274309/143‑1 (MQ=255) aTCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAGGAATCAAAcc < 1:434005/149‑1 (MQ=255) gCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCCGGCGTGAACCTTCAGACTCACCTGCCCAGGAATCaaa < 2:64902/143‑1 (MQ=255) cgctTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAGGAATCAAACCGTCAt < 2:397334/141‑1 (MQ=255) tctTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAGGACTCAAACCGTCATAGGGATc > 1:134649/1‑149 (MQ=255) tctTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACCCTCCTGCCCAGGAATCAAACCGTCATa > 2:520324/1‑143 (MQ=255) ctTCGGCGCTGAAAACAGCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCTGGAATCAAACCGTCATAGGGATCg < 1:588971/149‑1 (MQ=255) tcgtcgCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAGGAATCAAACCGTCATAGGGATCggg > 1:150357/1‑149 (MQ=255) tGAAAACATCGAACTGCACGGGATGCACCCCTGCTAGTGAAAATG‑GCGGTAGCATGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAGGAATCAAACCGTCATAGGGATCGGGCAATTCg < 1:181505/149‑1 (MQ=255) aaaCATTGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAGGAATCAAACCGTCATAGGGATCGGGCAATTCGCTg > 1:526032/1‑149 (MQ=255) aTCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAGGAAGCAAACCGTCATAGGGCTCGGGCAATTCGc > 2:151613/1‑143 (MQ=255) tCGACCTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑AGCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAGGAATCAAACCGTCATAGGGATCGGGCAATTCGCt < 2:557835/143‑1 (MQ=255) | CTGTTTCACCGCTTCAAACGGCGTGGCATCGCCTGGCAGCATATTCTGGCTTTCCAGTTGTTCAATCAGCAACGCATTGCTTAACGCTCCCGCCGCCAGCGCAGCAATCAGCCGTAGCTCTTCGTCGCTGAAAACATCGAACTGATCGGGCTGCATCCCGTCGAGCGTCAGTGCGCCG‑ATCAGGTTTTGCCCGGCAAACAATGGCAGACCAACGCAGGCGTGAACCTTCAGACTCTCCTGCCCAGGAATCAAACCGTCATAGGGATCGGGCAATTCGCTG > CP009273/2825097‑2825376 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |