| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009273 | 3,360,110 | Δ10,684 bp | IS5‑mediated | [yhcE]–sspA | [yhcE], yhcF, yhcG, yhcH, nanK, nanE, nanT, nanA, nanR, dcuD, sspB, sspA |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009273 | 3358981–3360109 | 3370793 | 10685–11813 | 48 [44] | [0] 90 | insH1–sspA | insH1, yhcE, yhcF, yhcG, yhcH, nanK, nanE, nanT, nanA, nanR, dcuD, sspB, sspA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3360109 | NA (NA) | 89 (1.020) | 69/288 | 0.2 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 3370794 = | 0 (0.000) | intergenic (‑15/+380) | sspA/rpsI | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog/30S ribosomal subunit protein S9 | |||||
No reads uniquely aligned to region.