| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | CP009273 | 2,400,257 | IS5 (+) +4 bp | intergenic (‑137/‑780) | lrhA ← / → alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2282398 = | NA (NA) | 105 (0.650) | 80/296 | 1.4 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 2400257 = | 0 (0.000) | intergenic (‑137/‑783) | lrhA/alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 | |||||
| * | ? | CP009273 | = 2283592 | NA (NA) | 209 (1.290) | 110/296 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 2400260 | 0 (0.000) | intergenic (‑140/‑780) | lrhA/alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 | |||||
Only 100 of 133 total aligned reads displayed.
CAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCA > CP009273/2282250‑2282539 | cAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaag > 1:2201913/1‑149 (MQ=255) ttCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaaggaag > 2:2013466/1‑149 (MQ=255) ttttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGCATATAAGGAAGGTg > 2:1763809/1‑149 (MQ=255) ttttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTg > 2:1118444/1‑149 (MQ=255) ttttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTg > 2:1613259/1‑149 (MQ=255) ttttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTg > 2:1613887/1‑149 (MQ=255) ttATATGCTGTTCTCCGCCAGGAATGAGTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTGCAGGACAACACCATAAAATGTCTCACCATACTCAACAGTTGATGCCAATGCAATGGGTGAATATatggaaggatcg > 1:52382/1‑145 (MQ=255) tatGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGagt > 2:1920048/1‑147 (MQ=255) tatGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTATCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTAAGGGTGAATATAAGGACGGTGCGAAt > 2:1646532/1‑149 (MQ=255) tGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCACCAGTTGATGCCAATGCTATGGGTGAATAGaagccagggggggataa > 1:2048075/1‑135 (MQ=255) gCTGTTCTCCGCCGGGATTGATTTTCGTATTATTGGCGGTCCCATAAGCCAGAAGGATATCTTTTTCCAGGACAACACCATCCACTGTCTCACCATACTCAACACCTGCTGACAATCCAATGGTTGGATAGaaggacagtggggaaaag > 1:776449/1‑136 (MQ=255) cTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGc < 2:132725/149‑1 (MQ=255) tGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACGGTCTCACCATACTCCACAGTTGATGCCAATGCTCTGGGAGAAGATAAGGAAGGTGCGGATAAGCg > 1:1053732/1‑149 (MQ=255) tcCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACAACATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGaa > 1:2074010/1‑149 (MQ=255) tcGCTAGGATTGATTTTCATCTTATTGGCGGTCCAATCCACCAGCTGCATATCCTTGTCCAAGACAACTGCGGCAGCGGTCGCACCATGCTCAGCAGTTGATGCCAATGCGATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGaaa < 1:2222079/148‑1 (MQ=255) ccGCCAGGATTGATTTTTGTATTCTTGGCTGTCTCAGAACCCAGCGGTTTATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCCACAGTTGATGCAAATGCTATGGGTGAATATAAGGAAGGTGAGAATAAGCGGGGaaa < 1:1216866/149‑1 (MQ=255) gCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAGGGAAGGTGCGAATAAGCGGGGAAAtt > 2:179981/1‑149 (MQ=255) ccAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAttc > 1:70585/1‑149 (MQ=255) ggATTGATTTTCGTATTTTTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAttcttc < 1:343775/149‑1 (MQ=255) agtgattTTCTTATTATGGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACGCCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTtctc < 2:1208404/147‑1 (MQ=255) ttttCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg > 1:1939541/1‑149 (MQ=255) tattatTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAg > 1:1279665/1‑149 (MQ=255) tattatTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAg > 2:2006470/1‑149 (MQ=255) ttGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt > 2:2466843/1‑149 (MQ=255) ttGGCGGTCCCATAAACCAGCTGGAGATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt < 2:1639977/149‑1 (MQ=255) gCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttca > 2:1761099/1‑149 (MQ=255) tCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCatttca‑tt‑tc < 2:1364066/149‑1 (MQ=255) tCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCatttca‑tt‑tc > 2:759767/1‑149 (MQ=255) ccATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑Tt‑tctt > 2:926816/1‑149 (MQ=255) cATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑Tt‑tcttc > 1:1163995/1‑149 (MQ=255) tAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCAt < 2:2546682/149‑1 (MQ=255) tAAACCAGCTGGATATCTTGTTCCAGGACAACACCATCAACGGTCTCACCATACTCAACAGTTGATGCCAATGCGATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCAt < 1:1114165/149‑1 (MQ=255) aCCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCCCCATACTCAACAGTTGATGCCAATGCTATGGGTGAAACAAACCTAAAATCTAGTAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGtt > 2:621873/1‑149 (MQ=25) aCCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGtt < 2:1786367/149‑1 (MQ=255) aCCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGtt < 2:234485/149‑1 (MQ=255) ccAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGttt < 2:2200509/149‑1 (MQ=255) ccAGCTGGATATCTTTTTCCAGCACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGttt < 1:825545/149‑1 (MQ=255) aGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGa > 2:866427/1‑149 (MQ=255) aGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGa < 2:1188530/149‑1 (MQ=255) ggATATCTTTTTCCAGGACAACACCCTCAACTATCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑CTTTCATGTTTGAGCCg > 2:2644022/1‑149 (MQ=255) gATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGCATAAGCGGGGAAATTCTTCTCGGCTGACTCGGTGCTGACA‑CG‑TTTTCATGTTTGAGTCGa > 1:670820/1‑149 (MQ=37) atatCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACCGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTGCTGGTTGAGCCgca > 1:454442/1‑147 (MQ=255) tatCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGAtt > 2:2282765/1‑149 (MQ=255) tCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCATTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TTTTCTTGTTTGGGCCGAtttt > 2:1321181/1‑149 (MQ=255) cTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGGTGCCAATGCTCTGGTTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTAATTTCA‑TT‑TCTTCATGTCTGAGCCGAttttt > 1:1112987/1‑149 (MQ=25) cTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTAGGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGAttttt > 1:2431674/1‑149 (MQ=255) tttttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGa > 1:2383373/1‑83 (MQ=255) tcttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTtc < 1:2508459/147‑1 (MQ=255) ctcccAGGACAACACCATCATCTGTCTCACCATACTCAACAGTTGATGCCACTGCTATGGGTGAATATAAGGAAGGTGCGAATCAGCGGGGACATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTtct < 2:1185403/146‑1 (MQ=25) ttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTtctc < 2:2236256/149‑1 (MQ=255) cAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCg < 2:1154653/149‑1 (MQ=255) aGGACAACACCATCAACTGTCTCACCATGCTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGt > 2:1601401/1‑149 (MQ=255) aGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGt > 2:2562078/1‑149 (MQ=255) ggACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTa < 1:341210/149‑1 (MQ=255) acaacaCCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTaaa < 2:2436597/149‑1 (MQ=255) cacCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGcc > 1:1779635/1‑149 (MQ=255) caaTCAACTGTCACACCATACTCAACAGTTGACGCCAATGCGATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTAACTCAGGCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt < 2:1837544/147‑1 (MQ=18) cATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTg > 2:1717758/1‑149 (MQ=255) aaCTTTCTCACCATACTCAACATTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATc < 1:2303598/149‑1 (MQ=255) aaCTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGATGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATc > 1:1732907/1‑149 (MQ=255) aaCTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGAGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATc > 1:635237/1‑149 (MQ=255) actggcttcccATACTCAACGGTTGATGCCAATGTTATGGGTGAATATAAGGAAGGTGCGAATAAGCTGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCa < 1:952746/140‑1 (MQ=17) aCTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCa < 1:2006470/149‑1 (MQ=255) aCTGTCGCACCACACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCa < 1:1028613/149‑1 (MQ=255) gagtatggtgagaCAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAt > 2:2585129/13‑149 (MQ=255) ccATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCCATTTa > 1:1172926/1‑149 (MQ=255) cATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAg < 2:70585/149‑1 (MQ=255) aCTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCTTGTTTGAGCCGATTTTTTCTCCGGTAACTGCCTTGCATCAGCCTTTTTAGAcc > 2:326548/1‑149 (MQ=17) cTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCg < 2:2241800/149‑1 (MQ=255) tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTTTACCGGAAGTGCCTTGACTCAGCCTATTTAGCCCGt > 2:495995/1‑149 (MQ=17) tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGt > 2:80314/1‑149 (MQ=255) tCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGt > 2:2411979/1‑149 (MQ=255) aaCAGTTGATGCCGATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAGATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTATTTCTGCCGTAAATGCCTTGAATCAGCGTATTTAGACCGttt > 2:1883875/1‑149 (MQ=17) aaCAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAATTAGACCGttt > 1:754204/1‑149 (MQ=255) cAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttct > 2:2363824/1‑149 (MQ=255) aGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGCAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTGAGACCGTttctt < 2:1923245/149‑1 (MQ=255) aGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTATTATTGACTGACTTAGT‑ACTTGA‑TTCTCTGCATGTTTGAGCCGAGTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttctt > 2:2628400/1‑149 (MQ=17) gTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc < 2:1163995/149‑1 (MQ=255) ttGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTGAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg > 2:199826/1‑149 (MQ=255) tGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGc < 2:865343/149‑1 (MQ=255) tGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGc < 2:2201913/149‑1 (MQ=255) gtctGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGc < 1:1317681/146‑1 (MQ=255) gATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCAATTTAGACCGTTTCTTCGcc > 1:2259898/1‑149 (MQ=255) gATGCCAATGCTATGGGTGAATATAAGGAAGGAGCGCAGAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGcc > 1:1894641/1‑149 (MQ=255) tGCCAATGCTATGGGTGAATATAAGGCAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAt < 1:1646532/149‑1 (MQ=255) gCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTAA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAtt > 2:1030233/1‑149 (MQ=255) ccAATGCTGTGGGTGAATATAAGGAAGGTGCGAATAAGCGGAGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAttt > 1:22482/1‑149 (MQ=255) aaTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTaa > 2:1687707/1‑149 (MQ=255) atccTATGGGGGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg < 1:229431/146‑1 (MQ=255) aTGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg < 2:777682/149‑1 (MQ=255) gCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAgac > 1:140597/1‑147 (MQ=255) cTATGGGTGAATATAAGGATGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCg < 1:2497399/149‑1 (MQ=255) ccatgcttcatatAAGGAAGGTGCGAATAAGCGGGTGGGTTCTTCGCTGCTGACTTAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGt > 1:244437/10‑149 (MQ=11) tttgtctcaataAGGAAGGTGCGAATAAGCGGGGTAGTTCTTCTCCGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGGTTTTTTCTCCCGTAAATGCATTGAATCTGCCTATTTAGACCGTCTCGTCGCCATTTAAGGCTTTa < 1:436442/140‑1 (MQ=1) ggTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATc < 1:2466843/149‑1 (MQ=35) tcaaTATGAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGCTTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATccc < 1:2365103/147‑1 (MQ=12) tGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGATGCATTAGT‑ATAAGACTA‑CCCGCATGTTTGAGACGATTTTTTCTCCCGTAACTGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCTTTTAAGGCGTTATccc < 1:1883875/149‑1 (MQ=11) gAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATcccc > 2:2099159/1‑149 (MQ=33) aaTATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCa < 1:759767/149‑1 (MQ=32) aaTATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCa < 2:2314025/149‑1 (MQ=32) | CAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA‑TT‑TCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCA > CP009273/2282250‑2282539 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |