| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | CP009273 | 2,400,257 | IS5 (+) +4 bp | intergenic (‑137/‑780) | lrhA ← / → alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2282398 = | NA (NA) | 105 (0.650) | 80/296 | 1.4 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 2400257 = | 0 (0.000) | intergenic (‑137/‑783) | lrhA/alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 | |||||
| * | ? | CP009273 | = 2283592 | NA (NA) | 209 (1.290) | 110/296 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 2400260 | 0 (0.000) | intergenic (‑140/‑780) | lrhA/alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 | |||||
Only 100 of 296 total aligned reads displayed.
TGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCC > CP009273/2400109‑2400405 | tGCACTTATCATATATTAAAAAAAAAAGGCGGATCATATTAAGCTGTTTAAGGCTGTGGACACACAAACAAGCAATTCCATGTGTAATGTGTCTCCCTGGTAGTTTCTTCCGGACCCAAAAAAAAAAAAAAAATGCATATGAGTTGCAc < 1:1185197/149‑1 (MQ=255) atatTATCACTTACCGGCGGCCCATGCTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgc > 1:1264959‑M2/1‑140 (MQ=255) ttatCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGGGTTGCACTAAgcaaggtgccaa < 1:722774‑M2/149‑13 (MQ=255) ttatCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCACATGAGTTGCACTAAggcaggtgcgaa < 1:676254‑M2/149‑13 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgctggttggcaccatccctaaaaggaccaggtag > 2:2601814‑M2/133‑138 (MQ=255) tgaccGGCCGCTCATACTGAGCTGGTTAATGCTGTGCCCACACGAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtcc > 1:943751‑M2/3‑130 (MQ=255) tGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACTCACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTGAggaaggtgcggacaagtccctta < 1:249989‑M2/149‑24 (MQ=255) tGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctga > 1:2634365‑M2/1‑126 (MQ=255) ggcggcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgat > 2:354238‑M2/1‑125 (MQ=255) cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGtt < 2:1500150‑M2/28‑1 (MQ=255) gcggcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTCAggaaggtccgaacaggtccctgata < 2:262376‑M2/149‑26 (MQ=255) agaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTtata < 1:1394737‑M2/31‑1 (MQ=255) gcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAGTCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatga > 1:1370506‑M2/1‑121 (MQ=255) aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAAt > 2:2286684‑M2/117‑149 (MQ=255) acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGc > 2:1041812‑M2/115‑149 (MQ=255) cggtctaaagatgctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGcc < 2:2028211‑M2/36‑1 (MQ=255) aTACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgacatgagatc < 2:1810719‑M2/149‑33 (MQ=255) tACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAGAGTAAAAATGCATATGAGTTGCACTAAggaaggagcgaacaagtccctgatatgagatca < 2:765305‑M2/149‑34 (MQ=255) ggtctaaatcggctcattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAACGACTCACATTGTTCCGTTATAATGCCt > 1:2308908‑M2/113‑149 (MQ=255) aCTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgttatgagatcag < 2:602137‑M2/149‑35 (MQ=255) aCTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcat < 2:1228262‑M2/149‑35 (MQ=255) ctaaataggctgattcaaggcattgacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGaa < 1:788034‑M2/40‑1 (MQ=255) taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAg < 2:1371887‑M2/41‑1 (MQ=255) cTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctcatatgagaccatgtttgt < 2:1008319‑M2/149‑41 (MQ=255) gTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAACGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat > 2:2151449‑M2/1‑106 (MQ=255) tcatccaaggcaaatacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagactttccccgcttactcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATcaca < 1:2588315‑M2/50‑1 (MQ=255) tGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGCAAGTAAAAATGCATATGCGTTGCACTAAcgaaggtgcgaacaagtcactgatatgagatcagggttatcatctgga < 1:281019‑M2/149‑49 (MQ=255) caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattagcaccttccCTAAAAAAGAGACTCACATTGTTCCGTGATAATGCCTGAAGTATACCACAAAata > 1:525600‑M2/95‑149 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagacagacgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAatat > 2:2244643‑M2/94‑149 (MQ=255) tgCACACACAAACAAGCAATTCCCTTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 2:12951‑M2/1‑96 (MQ=255) cacacacaAACAAGCAATTCCATTTGTACTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagaacatgtttgtcatctggagccatag < 2:1605623‑M2/149‑56 (MQ=255) cacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCCTCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca > 2:2196151‑M2/1‑90 (MQ=255) acaaacaaGCAATTCCATTTGTAATATGCCGCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAAGGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatccggtttgtcatctggagccatagaacag < 2:1381160‑M2/149‑61 (MQ=255) caaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAATCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 1:349428‑M2/1‑88 (MQ=255) caaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 1:2239792‑M2/1‑88 (MQ=255) aaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:851155‑M2/1‑87 (MQ=255) aaacaaGCAATTCCATTTGGAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 2:422210‑M2/1‑87 (MQ=255) caaGCAAATCCATTTGTAATGTGCCGCCCTGGCAGGTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaaggcccggatatgagatcaggtttgtcatctggagccatagaacagggttc > 1:866165‑M2/1‑84 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCg > 1:2346809‑M2/80‑149 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAAGATATCTTCAGGgatgc > 2:2472991‑M2/80‑147 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattaccccgcttattcgctccttccCTAAAAAAGCGACTAACGTTGTTCCGGTATCATGCCTGAACTAGATCACAGAATATATCTTCAGCGATCg > 1:1096430‑M2/80‑149 (MQ=255) aaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 1:570936‑M2/149‑67 (MQ=255) gCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc < 1:918629‑M2/149‑69 (MQ=255) aaTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTCAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 2:2551588‑M2/1‑79 (MQ=255) ttCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTCAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagtacagggttcatcatga > 2:1685702‑M2/1‑77 (MQ=255) ttCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:1107333‑M2/149‑73 (MQ=255) ttCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 1:465954‑M2/1‑77 (MQ=255) ctcCATTTGTAATGTGCCTCCCGGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGTGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagctatagaacagggttcatcatga > 1:963202‑M2/2‑77 (MQ=255) tCCATTTATAATGTGCCTCACTGACAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaacaggttcatcatgag < 1:1813349‑M2/149‑74 (MQ=255) cATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 2:2087967‑M2/149‑76 (MQ=255) aTTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca < 2:2310463‑M2/149‑77 (MQ=255) ttGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAAGGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc < 2:1856733‑M2/149‑79 (MQ=255) ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATtag > 2:2656207‑M2/68‑148 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATACTGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAg > 1:220785‑M2/67‑149 (MQ=255) caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGTTCACAGAATATATCTTCAGGGATCGCATATCTATTAAGt < 2:2373585‑M2/84‑1 (MQ=255) tAATGCGCCCCCCTGGCAGTTGCATCCGTAGCCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggggcgaacaagtcccggatatgagatcatgtgtgtcatctggagccatagaacagggttcatcatgagtcatcaac > 2:822029‑M2/1‑68 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCCCAGAATATATCTTCAGGGATCGCATATCTATTAAGtt > 1:2006066‑M2/65‑149 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTac > 2:101570‑M2/63‑149 (MQ=255) tgCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAGAATGCATATGAGGTGCACTAAagaaggtgcgaacaagcagctgatctgggatcatgtttgtcatctggagccatagaacagggttcatcatcagccatggacctacc < 2:245016‑M2/149‑87 (MQ=255) tgCCTCCCTGGCAGCTTCATCCGGAACCCGGACGAAAGTAAAAATTCATATAAGTTGCACTAAgaaagaagcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc < 2:385305‑M2/149‑87 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCCCATCGTTCCGTTATAATGCCTGAAGTAGATCACAGGATACATCTTCCGGGATCGCATATCTATTACGTtactcacc > 1:361027‑M2/58‑148 (MQ=255) tCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg > 1:1521335‑M2/1‑59 (MQ=255) cccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc > 2:578078‑M2/1‑58 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCTGATCTATTAAGTTACTCACTCtttt < 2:1342172‑M2/97‑1 (MQ=255) gggggtttcATCCGGACCCCGGACTAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac > 1:658109‑M2/5‑54 (MQ=255) gCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 1:1422082‑M2/1‑53 (MQ=255) aaatgcctgagtcagccgagaagaatttccccgtttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTa < 2:662959‑M2/100‑1 (MQ=255) aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAGCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCCGTCTTTTctc > 1:1844575‑M2/50‑148 (MQ=255) tttcgtccgggttccggatgaaagtaaaAATGCATATGAGTTGCACTAAggaaggtgcgaacaaggccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga < 2:896257‑M2/136‑101 (MQ=255) cctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTAt < 2:469035‑M2/105‑1 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTAt < 1:2609639‑M2/105‑1 (MQ=255) cgagtcagccgggaagaatgtccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGa < 1:237040‑M2/107‑1 (MQ=255) gtccgggttccggatgaaagTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctccgccgacagtgaattc < 1:1787302‑M2/140‑105 (MQ=255) gagtcagccgagaagaatttcccctcttattcgcaccgtccCTAAAAAAGCGGCGCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGAGCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGAc < 1:1475246‑M2/108‑1 (MQ=255) tCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggggcgaacaagtccctgatatgagatcatgacaataaaggttattcatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgagttcc < 2:1946376‑M2/149‑106 (MQ=255) agtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCtatttaatcga > 2:1566222‑M2/41‑144 (MQ=255) ccGGACCCCAGACGAAAGTAAAAATGCATATGAGTTGCCCTAAggaaggtgcgaaccagtccctgttgtgagctcctgcttgtcagctggaaccatacaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 2:1996440‑M2/1‑43 (MQ=255) ggAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca > 2:2539319‑M2/1‑41 (MQ=255) gAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcggccagtgaattcagcag < 1:750860‑M2/149‑110 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGcgcg > 1:2057129‑M2/35‑149 (MQ=255) gaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCCCTCTTTTCTGTTTATGACATGCGCGCGtt > 2:487386‑M2/31‑149 (MQ=255) aagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGttt > 2:1636269‑M2/30‑149 (MQ=255) aagaatctccccgcttattcgcacctgccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGttt < 1:2403345‑M2/120‑1 (MQ=255) aGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcag < 2:547402‑M2/149‑123 (MQ=255) gccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTAtaaa < 1:297436‑M2/127‑1 (MQ=255) gTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga > 1:1003769‑M2/1‑26 (MQ=255) tAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatgtgggatcaggtttgacatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac > 2:2497094‑M2/1‑25 (MQ=255) tAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcagcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac > 2:1182486‑M2/1‑25 (MQ=255) tAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcaggagtgatcaacttaccttcaccgacagtgaattcagcagtaagagcggtgggac < 1:192640‑M2/149‑125 (MQ=255) aaaTGCATAGGAGTTGCACTAAggaaggtgcgaacaagtgcctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccag > 1:2163207‑M2/1‑22 (MQ=255) tcgcacctcccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGa < 1:1863415‑M2/138‑1 (MQ=255) aaaggaacgcagtaaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagag > 1:269507‑M2/9‑15 (MQ=255) accttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCGATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTcc < 2:1550592‑M2/142‑1 (MQ=255) tGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattgtat < 1:228389‑M2/149‑142 (MQ=255) gCACTAAggaaggtgcgaacaagcccctgatatgagatcgtgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt > 1:1698328‑M2/1‑7 (MQ=255) aCTAAggagggttcgtacatgtccttgatgtgagatcatgtttgttatctggagcgatagaacagggttcatcatgagtcatcgacttaccttcgccgacagtgaattcagcagtaagcgccgtcagagcagaaaagagattttcttgt > 1:1008287‑M2/1‑5 (MQ=255) aCTAAggaaggtacgaacaagtccctgctatgagagcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattgagcagtaagcgccgtcagaccagaaaagagattttcttgt < 1:979440‑M2/149‑145 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc > 2:143729‑M2/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc < 1:2441010‑M2/149‑146 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattgtcttgtc < 1:2543488‑M2/149‑146 (MQ=255) | TGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCC > CP009273/2400109‑2400405 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |