New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	19796 =	NA (NA)	74 (1.130)	54/292	0.2	96.1%	noncoding (768/768 nt)	IS1	repeat region
	?	CP009273	3649844 =	3 (0.050)					coding (257/333 nt)	hdeA	stress response protein acid‑resistance protein

TGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/19940‑19796 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCC  >  CP009273/3649844‑3649991                                                                                                                                                                                                                                                                                                       tgcGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCT                                                                                                                                                  <  1:453945/146‑1        CATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGGCAGTACCGCCTGA                                                                                                                                                >  2:680060/1‑144         ATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAA                                                                                                                                               <  2:575380/144‑1          TAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTCTCAATAAGTTGGAGTCATTACCGCCTGAAC                                                                                                                                              >  2:811610/1‑144              CTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGG                                                                                                                                     >  1:634341/1‑149              CTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGG                                                                                                                                     >  1:552582/1‑149                    CTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAGTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGG                                                                                                                                    >  2:320442/1‑144                    CTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTAC                                                                                                                               >  1:158774/1‑149                         GCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTG                                                                                                                          >  1:432302/1‑149                         GCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCATGAACGATAGCTGGGGTTACGGTTG                                                                                                                          <  1:562861/149‑1                             CACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTGGTGGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTT                                                                                                                           <  2:705797/144‑1                             CACCTGGCACGGCTGGGACGGAAGTCGCTGTCGATCTCAAAATCGGTGGAGCTGCCTGAAAAAGTCATCGGGCATTATAAGAACATGAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAAT                                                                                                                      >  1:821943/1‑149                              ACCGGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTG                                                                                                                          <  2:928111/144‑1                               gCTGGCACGGGTGGCACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGC                                                                                                                         <  2:795842/143‑1                                cggggACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCGGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACC                                                                                                                   <  1:447299/144‑1                                CTGGCACGGCTGGCACGGAAGTCGCTGTCGTTCCCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGACATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACC                                                                                                                   <  1:351406/149‑1                                    cagcgcgGGGACGGAAGTCGCTGTCGGTCTCAAAATCGGTGGAGCTGCATGACAACGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGGTGGAGGCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGA                                                                                                               <  1:556117/142‑1                                     ACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACC                                                                                                                   <  2:1013569/144‑1                                     ACGGCTGGGACGGAAGTCGCTGTCGTTCCCAAAATCGGTGGAGCTACATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACC                                                                                                                   <  2:617116/144‑1                                     ACGGCTGGGACGGAAGTCGCGGTCGTTCTCAATATCGGTGGAGCTTCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACC                                                                                                                   <  2:503967/144‑1                                       GGCTGTGACGGAAGTCGCTGTCGTTCACAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGGCATTGCCGCCTGAAAGATAGTTGGGGGCACGGTTGCAATACCCT                                                                                                                 >  2:899942/1‑144                                        GCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACAT                                                                                                           >  1:1007043/1‑149                                             ggCGGGAGTCGCAGTCGTTCTCAAAGTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACAT                                                                                                           <  2:1028665/142‑1                                                     TCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATC                                                                                              >  1:320425/1‑149                                                           TCGTTCTCAAAATCGGTGGAGCTGCTTGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTATAACCGCATCTTCTGG                                                                                        <  1:824635/149‑1                                                             GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTC                                                                                           <  2:494504/144‑1                                                             GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATAAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAAGACCCTGAACATCTAAAACCGCATCTTC                                                                                           >  2:186903/1‑144                                                              TTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTT                                                                                     >  1:983757/1‑149                                                                  CAAACTCGGTGGAGATGCATGCCAAAGTCATCGGGCATTATCTGAACATCAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCT                                                                                 <  1:196536/149‑1                                                                  CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTT                                                                                      >  2:945109/1‑144                                                                  CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAAGAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCT                                                                                 >  1:861079/1‑149                                                                   AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTT                                                                                >  1:869216/1‑149                                                                   AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTT                                                                                >  1:607736/1‑149                                                                     AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTG                                                                              <  1:897640/149‑1                                                                       TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTT                                                                            <  1:665600/149‑1                                                                           gGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAACCACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGT                                                                             <  2:875449/143‑1                                                                           TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGT                                                                             <  2:498581/144‑1                                                                           TGGAGCTGCAGGACAAGGTCATCGGGCATTATCTGAACATAACACACTATCGATAAGTTGGAGTCCTTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGT                                                                             <  2:180813/144‑1                                                                            GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAACACACTATCAATAAGGTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCA                                                                       <  1:121070/149‑1                                                                            GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCCTCTTCTGGCTTATCTTTGTT                                                                            >  2:612965/1‑144                                                                            GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTT                                                                            <  2:167147/144‑1                                                                                  GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGGTACGGTTGCAATCCCCTGAGCATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGGGCTT                                                                 >  1:130230/1‑149                                                                                       ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCA                                                            >  1:998326/1‑149                                                                                       ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTT                                                                 >  2:320889/1‑144                                                                                          AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAA                                                         <  1:804487/149‑1                                                                                           AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATGCCCTGATCATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGC                                                             <  2:661892/144‑1                                                                                               ATCGGGCATTATCTGACCATAAAACACTATCACTAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAA                                                         <  2:352157/144‑1                                                                                                  GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCGGCGCTTCGGCAAAACCAACTGC                                                 >  1:341747/1‑149                                                                                                          TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCT                                         >  1:732587/1‑149                                                                                                           CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAATT                                             >  2:944129/1‑144                                                                                                            TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGtttt                                       <  1:1029584/149‑5                                                                                                              AACATAAACCACGATCAATAAGTTGGAGTCATTACCGCCTGAACGAGAGCTGGGGGTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAA                                     <  1:13549/149‑1                                                                                                              AACATAAAACACTTTCAATGAGGTGGCGTCATTACCGCCGGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAA                                     <  1:1081308/149‑1                                                                                                              AACATAAAACACTATCAATAAGCTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAA                                     <  1:778533/149‑1                                                                                                                CATAAAACACTATCAGGAAGTGGGAGTCCTTCCCGCCTTAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCCAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCTACTGCAGTTGGCTG                                        <  2:623583/144‑1                                                                                                                 ATAAAACACTACCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGA                                  <  1:912110/149‑1                                                                                                                  TAAAACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGt                                      >  2:897150/1‑143                                                                                                                    AAACCCTATCAATTAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAG                                    <  2:925306/144‑1                                                                                                                     AACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGG                                   >  2:772597/1‑144                                                                                                                      ACACTATCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGA                                  >  2:599459/1‑144                                                                                                                         CTATCAAGAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTC                               <  2:305465/144‑1                                                                                                                            TCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGACCATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGGGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTC                            >  2:756521/1‑144                                                                                                                            TCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTC                            <  2:748701/144‑1                                                                                                                            TCAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTATACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGCAGGGTTCGTC                            >  2:405838/1‑144                                                                                                                             CAATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACAACTAAAACCGCATCATATGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCC                           >  2:702933/1‑144                                                                                                                              AATAAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCC                     >  1:461875/1‑149                                                                                                                                 AAGTTGGAGTCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGG                  >  1:212002/1‑149                                                                                                                                   GTTGGAGTCATTACCGCCTGAACGCTAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAA                >  1:834126/1‑149                                                                                                                                      GGAGTCATTACCGCCTGAACGATAGCTGGGATTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTGGGCTGGAAGGATTCGTCCACAGCCACGCAATC             >  1:585403/1‑149                                                                                                                                          TCATTACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCA         <  1:651991/149‑1                                                                                                                                              gACCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACGGGAGTTGGCCGGAAGGATTAGTCCACAGCCAGGAAATCTTC          <  2:674744/143‑1                                                                                                                                               gCCGCCGGAACGATAGCTTGGGTTACTGTTGCAATTCCCTGAACATCTAAACCCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCA         <  2:224096/143‑1                                                                                                                                                CCGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTC   <  1:840354/149‑1                                                                                                                                                 CGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCC  <  1:355657/149‑1                                                                                                                                                                                                                                                                                                       TGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/19940‑19796 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCC  >  CP009273/3649844‑3649991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.