| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 19796 = | NA (NA) | 74 (1.130) | 54/292 | 0.2 | 96.1% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | CP009273 | 3649844 = | 3 (0.050) | coding (257/333 nt) | hdeA | stress response protein acid‑resistance protein | |||||
Only 100 of 167 total aligned reads displayed.
GCTGCTTTTAAAGAAGATATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCC > CP009273/3649699‑3649991 | tgcgcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCt < 1:453945‑M2/4‑1 (MQ=255) gctTTTAAAGAAGATATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAAGTTTATCTTTAAAGTTGGCCTGTTTATGCTGAGTACAACGCTGaa > 1:384254/1‑149 (MQ=255) ttttAAAGAAGATATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCGTGTTGATCTGGAGTACAAGCCTGAACg > 1:1005196/1‑149 (MQ=255) cataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggaggcagtaccGCCTGa > 2:680060‑M2/139‑144 (MQ=255) ataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGaa < 2:575380‑M2/7‑1 (MQ=255) aagaagATATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtga < 1:1009885‑M2/149‑6 (MQ=255) aagaagATATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtga > 1:73648‑M2/1‑144 (MQ=255) agaagaTATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTGAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGg < 2:591458‑M2/144‑2 (MQ=255) gaagaTATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTGTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGATTACAAGCCTGAACGgg < 2:586681‑M2/144‑3 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTgg > 1:634341‑M2/133‑149 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTgg > 1:552582‑M2/133‑149 (MQ=255) atatTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgc > 1:852983‑M2/1‑138 (MQ=255) atatTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATAGCTTTCTTAATTTTGTCCCATTCGCGTTTAACTTTATCTTTAAAGTTGGCTGGTTTATCATGAGTACAAGCCTGAACGggtgatgctgc > 1:727196‑M2/1‑138 (MQ=255) ttCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaa > 1:646260‑M2/1‑135 (MQ=255) ctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaagtcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTggg > 2:320442‑M2/127‑144 (MQ=255) ctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTAc > 1:158774‑M2/127‑149 (MQ=255) tCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaac > 1:8359‑M2/1‑134 (MQ=255) cGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgcc < 2:297003‑M2/144‑13 (MQ=255) gcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTg > 1:432302‑M2/122‑149 (MQ=255) gcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCATGAACGATAGCTGGGGTTACGGTTg < 1:562861‑M2/28‑1 (MQ=255) tGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactga < 1:1076229‑M2/149‑23 (MQ=255) tGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGgggggtgctgccaacttgctgt < 1:880089‑M2/149‑23 (MQ=255) cacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagtggtggtcattaccGCCTGAACGATAGCTGGGGTTACGGtt < 2:705797‑M2/27‑1 (MQ=255) cacctggcacggctgggacggaagtcgctgtcgatctcaaaatcggtggagctgcctgaaaaagtcatcgggcattataagaacatgaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAAt > 1:821943‑M2/118‑149 (MQ=255) accgggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTg < 2:928111‑M2/28‑1 (MQ=255) gctggcacgggtggcacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGc < 2:795842‑M2/29‑1 (MQ=255) ctggcacggctggcacggaagtcgctgtcgttcccaaaatcggtggagctgcatgacaaagtcatcggacattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATAcc < 1:351406‑M2/35‑1 (MQ=255) cAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgattta > 1:44951‑M2/1‑123 (MQ=255) tGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGgttgatgctgccaacttactgatttagtgta > 1:687156‑M2/1‑118 (MQ=255) acggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATAcc < 2:1013569‑M2/35‑1 (MQ=255) acggctgggacggaagtcgcggtcgttctcaatatcggtggagcttcatgacaaagtcatcgggcattatctgaacataaaacactatcaataatttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATAcc < 2:503967‑M2/35‑1 (MQ=255) cAAGGTAGTACGATGTAACGCATTCCCGGACTTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagt > 2:969734‑M2/1‑116 (MQ=255) cAAGGAAGTACGATGTAACGCATTCCCTGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagt > 2:929615‑M2/1‑116 (MQ=255) cAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagt > 2:19257‑M2/1‑116 (MQ=255) tcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCAtc > 1:320425‑M2/94‑149 (MQ=255) tcgttctcaaaatcggtggagctgcttgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTATAACCGCATCTTCTgg < 1:824635‑M2/62‑1 (MQ=255) gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCAtcttc < 2:494504‑M2/59‑1 (MQ=255) ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGttt > 1:983757‑M2/85‑149 (MQ=255) ccGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAAGTTTGTCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGTACGggtgctgctgccaacttactgatttagtgtatgatgttgtgtttgaggttctt < 2:108729‑M2/144‑54 (MQ=255) caaactcggtggagatgcatgccaaagtcatcgggcattatctgaacatcaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCt < 1:196536‑M2/69‑1 (MQ=255) caaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGtt > 2:945109‑M2/81‑144 (MQ=255) aaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCtt > 1:607736‑M2/80‑149 (MQ=255) aaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCtt > 1:869216‑M2/80‑149 (MQ=255) aatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTttg < 1:897640‑M2/72‑1 (MQ=255) tcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTttgtt < 1:665600‑M2/74‑1 (MQ=255) tACATATCTTTCTTAATTTTGGCCCATTCGCCGTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggc > 2:236357‑M2/1‑84 (MQ=255) ccaTATCTTTCTTTATTTTGTCCCATGCGCCTTTAACTTTCTCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct > 2:922165‑M2/2‑83 (MQ=255) aCATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct < 2:812614‑M2/144‑62 (MQ=255) atatCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt > 1:252378‑M2/1‑81 (MQ=255) tggagctgcaggacaaggtcatcgggcattatctgaacataacacactatcgataagttggagtccttaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTttgt < 2:180813‑M2/73‑1 (MQ=255) ggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCCTCTTCTGGCTTATCTttgtt > 2:612965‑M2/71‑144 (MQ=255) ttcttAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc > 2:379370‑M2/1‑75 (MQ=255) gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGGTACGGTTGCAATCCCCTGAGCATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGGGCtt > 1:130230‑M2/65‑149 (MQ=255) ttAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGGTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat > 2:829683‑M2/1‑72 (MQ=255) tAATTTTGTCCCATTCGCCTGTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc > 2:122796‑M2/1‑71 (MQ=255) aaTTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgctggtgtttttgaggtgctccagtggcttctgtttctatcagctgt < 1:336832‑M2/149‑80 (MQ=255) aaTTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt < 1:799170‑M2/149‑80 (MQ=255) acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCtt > 2:320889‑M2/60‑144 (MQ=255) cttccgatctgcctttaacttTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt > 2:1007575‑M2/11‑65 (MQ=255) agtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATGCCCTGATCATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGc < 2:661892‑M2/89‑1 (MQ=255) cccATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTAACCTGAGTCCAAGCCTGCACGggtgatgctgccaacttactgatgtagtgtatgatggtgtgtttgaggtgctccggtggcctctgtttctagcggcggtcca < 2:172120‑M2/144‑83 (MQ=255) cATTCGCCTTTAACTTTTTCTTTAAAGGTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttgtgtttctatcagctgtccctc > 2:882752‑M2/1‑60 (MQ=255) cATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTACCCTGAGTACAAGCCTGAACGggtgatgttgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt < 1:380835‑M2/149‑90 (MQ=255) atcgggcattatctgaccataaaacactatcactaagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCaaaa < 2:352157‑M2/93‑1 (MQ=255) ccTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcccaacatttg > 2:126040‑M2/1‑54 (MQ=255) aCTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatccgctgtgcctcctgttcagctaa < 2:215568‑M2/144‑97 (MQ=255) tttATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctgctg < 2:534325‑M2/144‑99 (MQ=255) ttATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggg < 1:1116199‑M2/149‑105 (MQ=255) aacataaaccacgatcaataagttggagtcattaccGCCTGAACGAGAGCTGGGGGTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGaa < 1:13549‑M2/113‑1 (MQ=255) cataaaacactatcaggaagtgggagtccttcccGCCTTAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCCAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCTACTGCAGTTGGCTg < 2:623583‑M2/110‑1 (MQ=255) aTCTTTAAAGTTGGCTTGTTTATCCTGAGTACGAGCCTGAACGggtgatgctgccaacgtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtg > 1:766244‑M2/1‑43 (MQ=255) aTCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtg > 1:366004‑M2/1‑43 (MQ=255) ataaaacactaccaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGa < 1:912110‑M2/116‑1 (MQ=255) taaaacactatcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCtggt > 2:897150‑M2/33‑143 (MQ=255) cTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggt > 1:35021‑M2/1‑41 (MQ=255) tttAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg < 1:317905‑M2/149‑110 (MQ=255) tttAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg < 1:1064590‑M2/149‑110 (MQ=255) tttAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg < 1:964958‑M2/149‑110 (MQ=255) ttAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcgctcctgttcagctactgacggggtggtgc < 1:420105‑M2/149‑111 (MQ=255) ttAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgcccctcctgttcagctactgacggggtggtgc < 1:411668‑M2/149‑111 (MQ=255) gTTGGCTTGTTTATCCTGTGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgc > 2:282185‑M2/1‑34 (MQ=255) ctatcaagaagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTc < 2:305465‑M2/119‑1 (MQ=255) tcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGACCATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGGGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTc > 2:756521‑M2/23‑144 (MQ=255) tcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTc < 2:748701‑M2/122‑1 (MQ=255) tcaataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTATACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGCAGGGTTCGTc > 2:405838‑M2/23‑144 (MQ=255) gCTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggagattttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcggctactgacgaggtggtgcgtatcggca < 1:998670‑M2/149‑120 (MQ=255) cTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaac < 2:875378‑M2/144‑116 (MQ=255) cTTGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaac < 2:490250‑M2/144‑116 (MQ=255) aataagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGcc > 1:461875‑M2/21‑149 (MQ=255) tGTTTATCCTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagggtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcacctactgacggggtggtgcgtaacgg < 2:157849‑M2/144‑118 (MQ=255) aagttggagtcattaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAgg > 1:212002‑M2/18‑149 (MQ=255) ggagtcattaccGCCTGAACGATAGCTGGGATTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTGGGCTGGAAGGATTCGTCCACAGCCACGCAATc > 1:585403‑M2/13‑149 (MQ=255) cTGAGTACAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagca < 2:686970‑M2/144‑126 (MQ=255) gAGTACTAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc > 2:551424‑M2/1‑17 (MQ=255) gaccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACGGGAGTTGGCCGGAAGGATTAGTCCACAGCCAGGAAATCTTc < 2:674744‑M2/140‑1 (MQ=255) gccGCCGGAACGATAGCTTGGGTTACTGTTGCAATTCCCTGAACATCTAAACCCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTca < 2:224096‑M2/141‑1 (MQ=255) cAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc > 1:100207‑M2/1‑12 (MQ=255) cAAGCCTGAACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaagtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaacagcaccgccggacata < 1:658016‑M2/149‑138 (MQ=255) ccGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTc < 1:840354‑M2/147‑1 (MQ=255) gCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAg < 2:388596/144‑1 (MQ=255) | GCTGCTTTTAAAGAAGATATTCCGGCCTGTTCAATATGCAAGGAAGTACGATGTAACGCATTCCCGGAATTACATATCTTTCTTAATTTTGTCCCATTCGCCTTTAACTTTATCTTTAAAGTTGGCTTGTTTATCCTGAGTACAAGCCTGAACGATAGCTGGGGTTACGGTTGCAATACCCTGAACATCTAAAACCGCATCTTCTGGTTTATCTTTGTTGTTCAGCGCTTCAGCAAAACCAACTGCAGTTGGCTGGAAGGATTCGTCCACAGCCAGGAAATCTTCACAGGTCC > CP009273/3649699‑3649991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |