| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 3,178,254 | IS5 (+) +4 bp | 48.8% | coding (56‑59/291 nt) | yqiC → | BMFP family putative fusogenic protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2282398 = | NA (NA) | 11 (0.570) | 10/274 | NT | 49.3% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 3178254 = | 11 (0.590) | coding (56/291 nt) | yqiC | BMFP family putative fusogenic protein | |||||
| * | ? | CP009273 | = 2283592 | NA (NA) | 10 (0.520) | 10/276 | NT | 46.9% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 3178257 | 11 (0.590) | coding (59/291 nt) | yqiC | BMFP family putative fusogenic protein | |||||
GCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCT > CP009273/3178106‑3178401 | aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc > 1:310124‑M2/149‑149 (MQ=255) atgaggcaggacgctttaaagggcggagaaacggtctaaataggctgagtcaaggcatttacgtgagaaaacatcggctcaaacatgaagaaatgcactgacttagtccgccgagaagaatttccccgcttattcgcaccttccCTaaa < 2:174905‑M2/5‑1 (MQ=255) ctggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAg < 2:247034‑M2/6‑1 (MQ=255) taacgccttaaatggcgaagaaacggtctaaatagccacattcaagacatatacaagagaaaaaataagctaaaacatgaagaaatgaaatgactgagtcaaccgagaagaatttccccgcttattcgcaccttccCTAAAG‑GTATCAg > 1:13941‑M2/137‑149 (MQ=255) cgccttaaatggcgaagaaacgcgctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgatatgactgtgtcagccgagaagaatttccccgcttattcgcaccttccCTAAAG‑GAATCAGGGa < 1:86955‑M2/16‑1 (MQ=255) aaTTCTGGTTGATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGGACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCACGTCCCCGAATCAATGCCTAAAG‑GAATCAGGGAGTTCggg < 2:234374/149‑1 (MQ=255) atggcgaagaaacggtttaaataggctgattcaaggcatttacgtgagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAG‑GAATCAGGGAGTTCgggg < 2:9374‑M2/24‑1 (MQ=255) tGGTTTATGACTTACCCTTCTCGCACTACACTGGCACTCAACACCTATCAGTACAGAAAAAATACAATGATTAACCCGAAAAAAATTGAGCCAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtcccggat < 1:104481‑M2/149‑25 (MQ=255) ttATGACTTACCCTTATCGCCCTACAATGGCACTCACCACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCTAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatga > 2:253599‑M2/1‑121 (MQ=255) ttACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgaaatcatg < 2:119741‑M2/149‑36 (MQ=255) aCCCTTATCGCACTACAATGACACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACACGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGaaaaaa > 1:287387/1‑149 (MQ=255) cccTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACGATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtgcctgctatgagatcatgttt < 2:112783‑M2/149‑39 (MQ=255) cccTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCATGAATCAATGCCTAAggaaggtgcgaacaaggccctgatatgagatcatgttt > 1:24693‑M2/1‑111 (MQ=255) aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGaaaaaaa < 1:267424‑M2/42‑1 (MQ=255) ccTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg > 2:55941‑M2/1‑110 (MQ=255) ccTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGAACCGCACAAACTTGAGCAAATCGCTCGCCAGGTGCACGAATCAATGCCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAAt > 2:157925/1‑149 (MQ=255) aggctgaatcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCg < 2:13684‑M2/46‑1 (MQ=255) ggCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTAAGCAAATCGCTCGCCAGGTTCACGAATAAATG‑TTACTGTCAAACAGGGAGTTCCGGGAACATGTGGAGAAAAAAATCCGCCAAACCCTACAAg > 1:153857/1‑149 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacctttcTTATTG‑GATTCAGTGAGTTTGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAgcgc < 1:170569‑M2/63‑1 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGc < 2:117174‑M2/66‑1 (MQ=255) aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACgcgc < 2:231624‑M2/74‑1 (MQ=255) cAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATAAATGCCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCt > 2:120518/1‑149 (MQ=255) aGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCt > 1:188161/1‑149 (MQ=255) aatCTGCATTGTTTGTCCCGAATAAAATTGAGCAAATCGCTCGCCAGGTTCACGGATCAATGCCTTAggaaggtgcgtacaagttcctgatatgagttcttgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact > 2:239851‑M2/1‑67 (MQ=255) aaTGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaagttaccttc < 2:161595‑M2/149‑90 (MQ=255) gAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagtcatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa > 1:115072‑M2/1‑48 (MQ=255) aaTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCaaa < 2:188161/149‑1 (MQ=255) gagaagaatttccccgcttattcgcaccttccCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGGGTTCGACGTCCAAACGCAAg > 2:47791‑M2/33‑149 (MQ=255) cAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGt > 2:25996/1‑149 (MQ=255) cgcCAGGTTCACGAATCAATGCCTAAggaggcttctaacaagtccatgctatgagatcatgtttgtcatctggagtcatagaacagggttcatcatgagttattaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga > 1:119741‑M2/1‑26 (MQ=255) ttCACGAATCAATGCCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGCCGTCCAACCGCAAGTCCTGTTACGGACTCGt > 2:156664/1‑149 (MQ=255) ttCACGAATCAATGCCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGt > 1:32568/1‑149 (MQ=255) attcgcaccttccCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGa < 2:269107‑M2/136‑1 (MQ=255) cGAAGCAATGCCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTTCAAGCGCAGCTGTCGCGCCTCGACCTTTTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGGCCTGTTACGGACTCGTGaaa < 1:50522/149‑1 (MQ=255) ccTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagacattttctggg < 1:132120‑M2/149‑145 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgacatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagtgccgtcagaccagaaaagagattttcttgtc > 2:147948‑M2/1‑4 (MQ=255) | GCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAG‑GAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCT > CP009273/3178106‑3178401 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |