| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1046001 | 73 (0.970) | 87 (1.160) | 65/296 | 0.1 | 69.6% | intergenic (+15/+418) | insB1/cspH | IS1 transposase B/stress protein, member of the CspA‑family |
| ? | CP009273 | 1973115 = | 3 (0.040) | intergenic (‑661/‑119) | flhD/uspC | flagellar class II regulon transcriptional activator, with FlhC/universal stress protein | |||||
Only 100 of 160 total aligned reads displayed.
ATTGAGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCC > CP009273/1045855‑1046141 | ttGAGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtta > 1:456654‑M1/1‑146 (MQ=255) aGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatct < 2:118895‑M1/149‑7 (MQ=255) gCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAAta > 1:246856/1‑149 (MQ=35) gTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttac < 1:1200322‑M1/149‑11 (MQ=255) tataACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTGGGAGTCATTACCttatctttact > 2:1089223‑M1/1‑138 (MQ=255) tataACCTGAATCTAGGGCAGCACCTGGCACGGCTGGGACTGAAGTCGCGGTCGTTCTCAAAATCGGTGGAGCTGTATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAATTTGGAGTCATTACCttatctttaca > 2:897816‑M1/1‑138 (MQ=255) aaCCTTAATCTGACGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGCCAAAGTCATCGTGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGc < 2:1043460/149‑1 (MQ=255) aaCCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaat < 1:975712‑M1/149‑15 (MQ=255) ccTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCtt < 2:356113/149‑1 (MQ=39) cTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataat > 1:378891‑M1/1‑132 (MQ=255) cTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTATCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAGAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTg > 2:1057024/1‑149 (MQ=255) tGAATCTGAGGCAGCACCTGGCACGGCTGGAACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTAGAGTCACTACCGACAATGCGTACGCTGga > 1:841324/1‑149 (MQ=11) gcagcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGAtt < 1:921855/149‑1 (MQ=255) agcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGt > 2:414662/1‑149 (MQ=255) acgtGGCACGGCGGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTa < 1:427559/146‑1 (MQ=255) aCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacc > 1:1184872‑M1/1‑116 (MQ=255) cTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttccctg > 2:494403‑M1/1‑114 (MQ=255) cACGGCTGGCACGGAAGTCGGTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGa < 2:1113855/149‑1 (MQ=255) gCTGGGACGGAAGCCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCTGGCATTATCTGAACATAAAACACTATCAACAAGTTGGAGTCAGTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGtat < 2:979847/149‑1 (MQ=255) cTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccga > 2:265180‑M1/1‑105 (MQ=255) cTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAGCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGtata < 1:1087066/149‑1 (MQ=255) tGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATaa > 2:521282/1‑149 (MQ=255) tGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATaa < 2:875957/149‑1 (MQ=255) gggACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgggt > 1:160955‑M1/1‑103 (MQ=255) gggACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagt < 1:887886‑M1/149‑47 (MQ=255) gaacgGAAGTCGCTGTCGTTCTCAAAATCGGGGGAGCCGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagtt < 1:498466‑M1/147‑48 (MQ=255) gACGGCAGTCCTTGTCGTTCACAAAATCGGTGGAGCCGCATGACAAAGTCAGCGGGGATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatccgcctaatatttacctgttggaccgagttg < 1:513876‑M1/149‑49 (MQ=255) gACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttg < 2:392669‑M1/149‑49 (MQ=255) gACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACAt > 2:661822/1‑149 (MQ=255) aCGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgg > 2:631567‑M1/1‑100 (MQ=255) aCGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGCTTGTCTCCTTTGACTATAACATc > 1:275954/1‑149 (MQ=255) aCGGAAGTCGCGGTCCTTCTCAAAATCGGAGGAGCTCCATGACACAGTCATCGGGCCCTATCTCAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgg < 1:1041600‑M1/149‑50 (MQ=255) gAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCtt < 2:1021142/149‑1 (MQ=255) aaGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTtg > 1:1187339/1‑149 (MQ=255) aaGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGACATTACCGACAATACGTACGCTTGAGATCAGGATAGTCTACTTTGAGTATAACATCCTtg > 2:1178550/1‑149 (MQ=255) gCTGTCGGTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtc < 2:533056‑M1/149‑59 (MQ=255) tGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgt < 1:486752‑M1/149‑61 (MQ=255) tGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgt < 2:334144‑M1/149‑61 (MQ=255) tCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgttt < 2:40881‑M1/149‑63 (MQ=255) tCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgttt < 2:271867‑M1/149‑63 (MQ=255) tCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgttt < 2:663769‑M1/149‑63 (MQ=255) ggtTCTCAAAATCGGTGGAGCTGCATGACAAAGTCACCGGGTATTATCGTATCATTATACACTTTCTATAAGTTCGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttc < 1:256489‑M1/148‑64 (MQ=255) cGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTcc < 2:353483/149‑1 (MQ=255) gTTCTCAAAAGCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttct < 2:410623‑M1/149‑65 (MQ=255) ttCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatgtttacctgtttgagcgagttgggattgcgccgtttctc > 1:537080‑M1/1‑84 (MQ=255) ttCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacatgtttgaccgagttgggattgcgtcgtttctc > 1:617581‑M1/1‑84 (MQ=255) ttCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCt > 1:98262/1‑149 (MQ=255) tctcAAAATCGGTGGAGCTGCATGACAAAGGCATCGGGCAGTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctcc < 2:456654‑M1/149‑67 (MQ=255) tcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactcataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccat < 1:792292‑M1/149‑69 (MQ=255) cAAAATCGGTGGAGCTGGATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTcc < 1:350620/149‑1 (MQ=255) cAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTCGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTcc < 1:1158548/149‑1 (MQ=255) aaaaTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCt > 2:360535/1‑149 (MQ=255) agcggTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcttttctccattagga < 1:751684‑M1/147‑74 (MQ=255) aTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattagga < 1:569993‑M1/149‑74 (MQ=255) tCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATa < 2:1038869/149‑1 (MQ=255) ggTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagta < 2:67370‑M1/149‑77 (MQ=255) tgggactgcagGACAAAGTCATCTGGCATTATCTGAACATAAAACACTATCAAGAAGTTGGAGTCATTACCttatctttactaataatcagaataatatctacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaa < 1:794411‑M1/144‑79 (MQ=255) gAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCtt > 2:58549/1‑149 (MQ=255) aGCTGCATGACAAAGTCATTGGGCGTTATCTTAACATAACCCACTATCAATAAGTTGGAGTCATTACCGACAATACGTACCCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAACCTCCCTTTCCTCATACCGCTTg < 1:170096/149‑1 (MQ=37) cTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACCATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagcttt < 2:1137359‑M1/149‑84 (MQ=255) gCATGACAAAGTCATCGGGCATTATCTGAACATACAACCCTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACt > 1:810737/1‑149 (MQ=255) gCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaa > 2:133075‑M1/1‑64 (MQ=255) cATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagcgttaat > 1:365556‑M1/1‑63 (MQ=255) cATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTGCCGCATACCGCTTCCACta > 1:58359/1‑149 (MQ=255) cATGACAAAGTCACCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCtcatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaat < 2:130659‑M1/149‑87 (MQ=255) aTGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGACATTACCttatatttcctaataatcagactaatatttacctgtttgaccgacgtgggattgcgtcgtttctccattaggagtaaaggtttagtg > 2:169570‑M1/1‑62 (MQ=255) tGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgt > 2:713441‑M1/1‑61 (MQ=255) tGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgt > 2:1051715‑M1/1‑61 (MQ=255) gACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtc > 1:738056‑M1/1‑60 (MQ=255) aCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatctttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtca < 2:795289‑M1/149‑91 (MQ=255) aCAAAGTCATCGGGCATTATCTGAACATAAAACAACATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGAATAACATCCTTGTGAAATCTCACTTTCCTCATACCGCTTGCACtatata > 1:334132/1‑149 (MQ=255) aaaGTCATCGGGCATTATCTGAACATAAAACACTCTCAATAAGTTGGACTAATTACCGACAAACCGTACGATTGAGATCAGGATTGTTTACTTTGAGGATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACt > 1:291045/1‑149 (MQ=37) aaaGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacc > 2:333703‑M1/1‑57 (MQ=255) gTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctga > 1:847746‑M1/1‑54 (MQ=255) tCATCGGGCATTATTTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgacggagtttttattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaa < 2:543472‑M1/149‑97 (MQ=255) tCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgac > 1:137039‑M1/1‑53 (MQ=255) tCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaa < 2:703285‑M1/149‑97 (MQ=255) tCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCgg < 1:1010064/149‑1 (MQ=255) tCGGGCATTATCTGAACATAAAACACTATCAATGATTTGGAGTCATTACCttatctttactaataatcggactaatatttacctgtttgaccgagttgggattgcgtcgtttctcctttgggggtaacattttgattgcgcctgaagtt > 1:209666‑M1/1‑50 (MQ=255) tCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGATTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagtt < 2:220825‑M1/149‑100 (MQ=255) tCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagtt > 2:910368‑M1/1‑50 (MQ=255) ggCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcac > 1:1028833‑M1/1‑47 (MQ=255) cTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGgcgcg > 2:766125/1‑149 (MQ=255) aCATAAAACACTATCAATCAGTTGGAGTCATTACCGACAAATCGTTCCCGTCAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCaga < 2:581495/149‑1 (MQ=255) cATGAAACAATAGCAAGAAGTTGGGGTAATTGCCGACAATACGTACGCGTGAGATCAGGATTGTCTACTTTGGGTATAACATTCGTGTGAAATCTACCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCagag < 1:856528/149‑1 (MQ=255) cATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCagag < 1:126203/149‑1 (MQ=255) aTAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactactcgtcgggataagaattacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcacagaataaggaacag < 2:1142043‑M1/149‑117 (MQ=255) aTAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAgg < 2:388945/149‑1 (MQ=255) tAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcacagaataaggaacccg > 1:908012‑M1/1‑32 (MQ=255) aaaaCACTATCAATAAGTTGGAGACATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattagaagtaaagctttaatgtcacctgaagttcacagaataaggaacaggt > 2:248213‑M1/1‑31 (MQ=255) aaaCACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAACTCTAACTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGaa > 2:1194806/1‑149 (MQ=255) aaaCACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCGTGCACCATATACTGCGGGTAGGAAAGGCGCGCAGAGGGaa < 1:331388/149‑1 (MQ=255) acTCTCATTTAGTTGGTGTTCTTACCttatcttttctaatagtcagaatcatttgtacctgtttgaccgagttgggtttgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcactgaataaggaacaggttatga < 1:561370‑M1/149‑124 (MQ=255) tATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcaccgaaaaatcacagaataaggaccaggttctgagc > 1:662932‑M1/1‑24 (MQ=255) tATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAAGCGCGCAGAGGGAAATATaa > 2:655005/1‑149 (MQ=255) aaTAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCCCTATATACTGCGGGTAGGAAAGGCGCGCCGAGGGAAATATAAGAtt > 1:57298/1‑149 (MQ=255) tAAGTTGGACTCATTACCGCCAATACGTACGCTTGAGATCAGGATCGACTACGTTGAGTATAACATCCTTGTAAAAACTCCCTTTCCTCATACCGCTTGCACTATCTACTGCGGGTGGGACCGGCGCGCCGCGGGAAACATAAGAgtgt > 1:436781/1‑149 (MQ=255) ttGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAAc > 2:264701/1‑149 (MQ=255) gTCATTACCGACAATACGTACGCTTGAGATTAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATcc < 2:1175622/149‑1 (MQ=255) gTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATcc < 1:941315/149‑1 (MQ=255) | ATTGAGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCC > CP009273/1045855‑1046141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |