| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3628663 | 58 (0.950) | 51 (0.830) | 44/292 | 0.4 | 46.8% | coding (463/1053 nt) | yhiM | acid resistance protein, inner membrane |
| ? | CP009273 | 3645396 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 110 total aligned reads displayed.
TGTCGCCGGCCATGTTATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAACCGCAATCTGTGCCT > CP009273/3628515‑3628804 | tGTCGCCGGCCATGTTATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCAGTCCCTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAAGCTTATTCTTCAT‑Taa > 2:408364/1‑149 (MQ=255) ccGGCCATGTTATTTTCGGCGTTGGGATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACTGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaag < 2:612416‑M1/149‑6 (MQ=255) ggCCATGTTATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCCGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGCAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGTTaa > 2:155204/1‑149 (MQ=255) ggCCATGTTATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCCAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggt > 2:582856‑M1/1‑142 (MQ=255) ccATGTTTTTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCCCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCTGTACAGGCTTATTCTTCAT‑TAAggaa < 1:526838‑M1/144‑5 (MQ=255) aTGTTATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGc < 2:146362/149‑1 (MQ=255) tGTTATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCACGAGCGACGGAACACCGGTACAGGCTTATTCTTCCT‑TAATCGGTac > 1:180190/1‑143 (MQ=255) tATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcg > 1:591493‑M1/1‑134 (MQ=255) cGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGACCACCGGTACAGGCTAATGCTTCAT‑TAATCGGTAACGGctcaat > 1:19319/1‑139 (MQ=255) ggCATTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTACAT‑TAATCGGTAACTGCCTCATTGCCGt > 2:286743/1‑149 (MQ=255) gCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcg > 1:118266‑M1/1‑126 (MQ=255) tATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGttt < 2:916573/149‑1 (MQ=255) tATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCCGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGACCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAGggaaggtgcgaatacgcggggcaat > 1:849961‑M1/1‑119 (MQ=255) ttgcttgccgCCTGTGTATCGACGGTGGCAGCGTCAGCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTCCAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaatt < 1:625668‑M1/140‑27 (MQ=255) tGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattc > 1:666784‑M1/1‑117 (MQ=255) tGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAAAAGGTATTGCTTCATTGCCGTACCCg < 1:681542/144‑1 (MQ=255) aTTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcgg > 2:118901‑M1/1‑115 (MQ=255) aTTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcgg > 2:932930‑M1/1‑115 (MQ=255) aTTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTCCCTCATTGCCGTTCCCGTTTTACt > 2:659562/1‑149 (MQ=255) ccgccTGTGTATCGACGGTGGCAGCGTTATCCGGTCTCTTTCTGCTCATTCCCAGAGGTGCAGCGGGGTGTAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCAcc < 2:301549/149‑1 (MQ=255) gccTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggc > 1:592443‑M1/1‑109 (MQ=255) tgtATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgact > 1:508922‑M1/1‑104 (MQ=255) ttagcgaggGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactc < 1:454556‑M1/140‑42 (MQ=255) tATCCACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGt < 2:274813/149‑1 (MQ=255) tCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt > 2:471518‑M1/1‑100 (MQ=255) tCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATCCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTc < 1:5548/144‑1 (MQ=255) gACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca < 2:375022‑M1/149‑52 (MQ=255) aCGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat > 1:462331‑M1/1‑97 (MQ=255) ggTGGCAGCGTCCTCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGttt < 1:247646/144‑1 (MQ=255) ggTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCAttt < 2:805244/149‑1 (MQ=255) gTGGCAGCGTCATCCGGTTACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc < 2:75375‑M1/149‑56 (MQ=255) ggtaGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGt < 2:381849/146‑1 (MQ=255) ggCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGGGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTACATGCCTCAGTGCCGTTCCCGTTTTACTCCCCCTGCCCGGttccct > 1:622390/1‑140 (MQ=255) gCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCGTCAT‑TAAggaaggtgcgaataaggggggaaattcttctcggctgactcagtcatttcatt > 1:252556‑M1/1‑91 (MQ=255) aGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACCCCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGGTTCATTTGGTCTa > 2:468718/1‑149 (MQ=255) cGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt < 1:839723‑M1/144‑58 (MQ=255) ttcGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTAtt < 1:261446/142‑1 (MQ=255) tCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCGAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCt < 2:215806/149‑1 (MQ=255) ccGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACAACGGATAAGTCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTg < 2:759480/149‑1 (MQ=255) cGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGACCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt < 1:649495‑M1/144‑65 (MQ=255) cACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACg < 2:840030/149‑1 (MQ=255) tttCTGCTCATTCCCACAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt < 2:130922‑M1/149‑77 (MQ=255) tttCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttgatgtttgagccga > 1:265601‑M1/1‑73 (MQ=255) tttCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTa > 1:394027/1‑144 (MQ=255) tttCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTa > 1:24682/1‑144 (MQ=255) tCTGCTCATTCCCAATAGTGCAGCGGGGAGCAAGTGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTATCTGCTTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTg < 2:394072/149‑1 (MQ=255) tCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTg > 2:495481/1‑149 (MQ=255) atGCTCATACCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCGTCAT‑TAATCGAGAACTGCCTCATTGCCATTCCCGTTTTACTAACCCTGCTCGGTTTCATTTGGTCTATTA‑cacgcgtccgt > 1:737788/2‑134 (MQ=255) tGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTa < 1:692041/144‑1 (MQ=255) tGCTCATTCCCAAAAAGGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTa < 1:591732/144‑1 (MQ=255) gCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTg < 2:548900/149‑1 (MQ=255) gCTCATTCCCAAAAATGCAGCGGGGAGCAAGACACAAGAAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTCACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTaa > 1:435916/1‑143 (MQ=255) cTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTCTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGt > 1:522508/1‑144 (MQ=255) tCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTGTCATTTGGTCTATTA‑CGCTGTTACGTTGTGCTgcc > 2:878894/1‑147 (MQ=255) tCATCCCCAAAACTGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg < 2:778260‑M1/149‑84 (MQ=255) aTTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCt < 1:255970/144‑1 (MQ=255) tCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc > 1:408297‑M1/1‑62 (MQ=255) tCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTTTTACGTAGTGCTGa > 1:956259/1‑144 (MQ=255) cccAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat < 2:564005‑M1/149‑89 (MQ=255) ccAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACGGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgatccgattttttctcccgtaaatg > 2:180869‑M1/1‑60 (MQ=255) ccAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt > 1:846023‑M1/1‑60 (MQ=255) ccAAAAAGCCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTACCGTTTTGCTCACCCTGCGCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACt < 2:150131/149‑1 (MQ=255) cAAAAATGCAGCGGGGGGCAAGAGCGACGGAACACCGCTACAGGCTTATTCTTCAT‑TAATCCGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTc > 2:661479/1‑149 (MQ=255) aaaaaTGCAGCGGGGAGCAAGAGCGACGGAACACCGGTGCAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCGGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTGCCTAGCGCTGCCTTAACTcc > 2:356500/1‑149 (MQ=255) gCAGCGGGGAGCAAGAGCTAAGGAACATCGGTACAGGCTTATTCTTCAT‑GAAggaaggtgcgaataatcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcctattttttctcccgtaaatgcct < 1:648731‑M1/144‑93 (MQ=255) cGGGGAGCAAGGGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATTGGTAACTGCCTCATTGCCGTTCCCGTTTTGCTCACCCTGCTCGGTTTCATTTGGTCTCTTA‑CGCTGTTACGTAGTGCTGACATaatgcggagttatgtc < 2:293583/149‑15 (MQ=255) cGGGGAGCAAGAGCGACGGAACACGGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTc > 2:775446/1‑149 (MQ=255) aggggaGCAAGAGCGACGGAACACCGGCACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgtttttttctcccgtaaatgccttgaatcagc < 2:317152‑M1/148‑102 (MQ=255) gggAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTAt > 1:580793/1‑144 (MQ=255) ggAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTcgcg < 2:63578/149‑1 (MQ=255) cagCAAGAGCGACGGAACACCGGTACAGTCTTATTCTTCAT‑TAAggaaggtgcgaataagcgtgtaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag < 1:918242‑M1/143‑101 (MQ=255) aGCAAGAGCGAAGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt < 2:651107‑M1/149‑107 (MQ=255) gCAAGTGCGGCGGATCACCGGGACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt < 2:199021‑M1/149‑108 (MQ=255) cAAGAGCGACGGAACACCCGGACAGGCATATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTcgc > 1:301128/1‑144 (MQ=255) aaGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttccatcagccta > 1:458775‑M1/1‑40 (MQ=255) agCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccggttttttctcccgtaaatgccttgaatcagcctatttagacc > 2:459389‑M1/1‑37 (MQ=255) gCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTc > 1:733697/1‑144 (MQ=255) gCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGATTTACTCACCCTGCTCGGTCTCATTTAGTATAATACCGGTGTT‑CTTTGCGCTGGCATAACTCCGCATTATTTCGCGGGtg > 1:671141/1‑143 (MQ=255) gACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTTTGTCGCGGGTCACGTAtt > 2:485922/1‑149 (MQ=255) cGGACCACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGGCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGt < 1:240850/144‑1 (MQ=255) cGGAACACCGGTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc < 2:514092‑M1/149‑118 (MQ=255) cGGAACACCGGTACAGGCTTATAATTCATATGAT‑TGTAGCTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCACTATGTCGCCGAGCACGt > 1:925632/1‑144 (MQ=255) gAACCCCGGTACAGGCTTATTCCTCAT‑TAATCGTTAACCGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCtt < 2:196765/149‑1 (MQ=255) cacCGGTACATGCTTATGCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc < 1:2967‑M1/144‑118 (MQ=255) cacCGGTACAGGCTTATTCTTCAT‑TAATCGGTACCTGCCTCATTGCCGTTTCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGc < 1:420747/144‑1 (MQ=255) ggTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcggtcatttcatttcttcctgtttgagcggattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcg < 1:875130‑M1/144‑122 (MQ=255) ggTACAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttgtctcccgtaaatgccttgaatcagcctatttagaccgtttcttcg < 1:875173‑M1/144‑122 (MQ=255) aCAGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctgcatgtttgagtcgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa < 2:447297‑M1/149‑130 (MQ=255) cAGGCTTATTCTTCTT‑TATTCGGTAACTGCCTCTTTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAACCGc < 2:466152/149‑1 (MQ=255) aGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg > 2:818194‑M1/1‑18 (MQ=255) aGGCTTATTCTTCAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttaatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatatagaccgtttcttcgccatttaagg > 2:640087‑M1/1‑18 (MQ=255) gCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAAcc < 1:853826/144‑1 (MQ=255) gCTTATCCTTCAT‑TAATCGCTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGTCATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAAcc < 1:474323/144‑1 (MQ=255) ttATTCTTCAT‑TAAggaaggtgctaataagcggggaaattcttctcggctgacccagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagactgtttcttcgccatttaaggcgtt < 2:578705‑M1/149‑136 (MQ=255) ttcttcAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAACCGCAATCtgtg < 2:113009/149‑1 (MQ=255) tcAT‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtaatcccca > 2:83414‑M1/1‑7 (MQ=255) tcAG‑TAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca < 2:130178‑M1/149‑143 (MQ=255) cAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAACCGCATTCtgtg > 1:866238/1‑144 (MQ=255) cactAATCGGTAACTGCCTCTTTCCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTACGTCGCGGGTCACGTATTGCTTGGGTTAACCGCAATCtgtg < 1:760363/141‑1 (MQ=255) tAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAACCGCAATCTGTGCCt < 1:711321/144‑1 (MQ=255) | TGTCGCCGGCCATGTTATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCAT‑TAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTA‑CGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAACCGCAATCTGTGCCT > CP009273/3628515‑3628804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |