BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 777295	86 (1.230)	5 (0.080)	6/254	NT	6.8%	intergenic (+187/‑246)	lysQ/nadA	tRNA‑Lys/quinolinate synthase, subunit A
*	?	CP009273	= 2514847	58 (0.900)	5 (0.080)	6/254	NT	6.8%	noncoding (575/1345 nt)	IS186	repeat region

Only 100 of 103 total aligned reads displayed.

GCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTC  >  CP009273/777147‑777442

gCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTT                                                                                                                                                     <  2:32258‑M1/149‑1 (MQ=255)

gCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCCTATTT                                                                                                                                                     >  2:935768‑M1/1‑149 (MQ=255)

       tCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGACATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGCCCCTTTTTTACTATTc                                                                                                                                              >  2:383892/1‑149 (MQ=9)

        cAAAGATTCGCACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGCCGCCGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCa                                                                                                                                             <  1:289496/149‑1 (MQ=12)

        cAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCa                                                                                                                                             <  2:1023133/149‑1 (MQ=32)

        cAAACATTCGCAGCTGCAGCAGGTTTTAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCa                                                                                                                                             <  1:1090575/149‑1 (MQ=255)

         aaaGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAg                                                                                                                                            >  2:385073/1‑149 (MQ=32)

              tttgtaCCCGCAGCAGGTTTGGGTTGAGCGCAGGGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATc                                                                                                                                       <  2:314910/144‑1 (MQ=255)

              ttCGAACCTGACGGAGGTTTGAGTTGAGCGCAGCCAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACTCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATc                                                                                                                                       <  2:815303/149‑1 (MQ=11)

              tcccaaCCTACAGCAATTTTCAGTCGAGCGCACCGAAACAACGGAGCCCCACGCGGCCACGGCCCAAAGAGCGATCGAAGCTAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCATGCATc                                                                                                                                       <  2:521586/145‑1 (MQ=11)

                 gAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTc                                                                                                                                    >  1:1209755/1‑149 (MQ=39)

                 gAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCAGCCTc                                                                                                                                    >  1:628386/1‑149 (MQ=37)

                      tGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAAttt                                                                                                                               <  2:922917/149‑1 (MQ=255)

                         cgcagGTTTGGGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCAc                                                                                                                            <  1:249039/148‑1 (MQ=255)

                         agcagTTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCCAAAGGCGCTTTTTTACTATTCAGGCATCCTCAATTTCAc                                                                                                                            >  2:868637/1‑149 (MQ=255)

                           cagGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAGTTTCACtt                                                                                                                          >  1:194346/1‑149 (MQ=255)

                           cagGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACtt                                                                                                                          >  1:1117339/1‑149 (MQ=255)

                             ggTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGCAAAAAAGCGCCTTTAGGGCGCTTTTTTacattggtgggtcgtgcaggatgactcgc                                                                                                                        <  1:1063447‑M1/149‑30 (MQ=255)

                                ttgagttgagCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTaa                                                                                                                     >  1:319575/1‑149 (MQ=255)

                                  gggttgggCGCGGGGAAACAACGGAGCCGGTCAGGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCTCCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAAc                                                                                                                   <  2:697290/147‑1 (MQ=17)

                                  gggttgagCGCCGCGCAACAAGGGCGCCGCTCGCGGCGACGGCTCGAACGGCGAGCGACGCGTCTATGCCTGTATTACCCACCAATGTAAAAAAGCGCCCTAACCGCGCTTTCTTGCTATTCAGGCATCCTTAATTTCACtttttccac                                                                                                                   <  2:571627/147‑7 (MQ=9)

                                  gagttgcgCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAAc                                                                                                                   <  2:735217/149‑1 (MQ=255)

                                  gagttgagCGCCGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGAGCGAGCGAAGCGACTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAAc                                                                                                                   <  2:886736/149‑1 (MQ=255)

                                  gagttgagCGCAGCGAAACAACGGCGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAAc                                                                                                                   <  2:894774/149‑1 (MQ=255)

                                   agttgagCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCTTTAGGGCGCTTTTTTacattggtgggtcgtgcaggatgactcgcttcgct                                                                                                                  <  2:1103703‑M1/149‑36 (MQ=255)

                                    gttgagCGCAGCGAAACAACGGAGCCGCTAGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCt                                                                                                                 >  1:556480/1‑149 (MQ=255)

                                    ggtgagcgGAGCGAAGCAAGGGGGCCGGTCGCGGCGACGGCCCGATGGGCGGGGGAGGCGAGTCATCCTGCAGGACCCACGTATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTacattggtgggtcgtgcaggatgactcgcttcgctc                                                                                                                 <  2:1084301‑M1/147‑37 (MQ=255)

                                     ttgagCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGTGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg                                                                                                                >  1:550191/1‑149 (MQ=255)

                                     ttgagCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCCCTTTGTCAACCtc                                                                                                                >  1:618843/1‑148 (MQ=255)

                                     ttgagCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg                                                                                                                >  1:458886/1‑149 (MQ=255)

                                     ttgagCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg                                                                                                                >  1:489856/1‑149 (MQ=255)

                                      tgagCTCCGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGTGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGCAAAAACGCGCCTTTAGGGCGCTTTTTTacattggtgggtcgtgcaggatgactcgcttcgctcgc                                                                                                               <  1:1121106‑M1/149‑39 (MQ=255)

                                       gagCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtgat                                                                                                              <  2:331148/149‑1 (MQ=255)

                                         gcgcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtgctga                                                                                                            >  1:103728/1‑149 (MQ=255)

                                          cgcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGAc                                                                                                           >  1:1128919/1‑149 (MQ=255)

                                           gcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa                                                                                                          <  2:497805/149‑1 (MQ=255)

                                                 caacaccGGAGCCGCTCGTGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGCCa                                                                                                    <  2:1038066/148‑1 (MQ=255)

                                                   acaacGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCaga                                                                                                  <  1:385073/149‑1 (MQ=255)

                                                    caacGGTGCCGCTCGCGGCGGCGGACCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCagag                                                                                                 <  1:553121/149‑1 (MQ=255)

                                                        ggAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACCTTGTAAACCTGATGACATCGTCAGAGCTTa                                                                                             <  1:650342/149‑1 (MQ=255)

                                                        ggAGCCGCCCGCGGCGGCGCCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAACCGCCCTTTGTTTCTATTATGGGATCCTCAATTTCACTTTGTAAACCTTATGACATCGTCAGAGCTTa                                                                                             <  1:601591/149‑1 (MQ=18)

                                                         gtgCCGTTCGCGGCGCCGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTAc                                                                                            <  2:173923/147‑1 (MQ=255)

                                                         gAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTAc                                                                                            >  1:983307/1‑149 (MQ=255)

                                                          aGCCGCTCGCGGCGCCGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGAGGACATCGTCAGTGCTTACt                                                                                           <  2:843255/149‑1 (MQ=255)

                                                                tCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaa                                                                                     <  2:642446/149‑1 (MQ=255)

                                                                 cgcgGCGACGGCCCGAAGGGCGAGCGAAGCTAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaag                                                                                    <  1:500528/149‑1 (MQ=255)

                                                                   cggcgACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaagca                                                                                  >  1:1156430/1‑149 (MQ=255)

                                                                      cgACGGCCCGAAGGGCGAGCTAAACTACTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAAct                                                                               <  2:1178495/149‑1 (MQ=255)

                                                                             ccGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTCAAGGCGCTTTTTTGCTATTCCGGAATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAAGCCTTACTGTGCAAGCAACTCTATGTc                                                                        >  1:289881/1‑149 (MQ=25)

                                                                              cGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCg                                                                       <  2:372798/149‑1 (MQ=255)

                                                                               gAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCgg                                                                      <  1:655541/149‑1 (MQ=255)

                                                                                aaGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGt                                                                     <  2:279349/149‑1 (MQ=255)

                                                                                 aGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTg                                                                    <  2:559777/149‑1 (MQ=255)

                                                                                    gcgagcgaAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGaa                                                                 >  2:1154635/1‑149 (MQ=255)

                                                                                    gcgagcgaAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGaa                                                                 <  2:556480/149‑1 (MQ=255)

                                                                                    gcgagcgaAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGaa                                                                 <  1:328722/149‑1 (MQ=255)

                                                                                    gcgagcgaAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAAGCGCTTTTTTGATATTCAGGCATCCTCAATTTACCTTTGTAAACCTGATCAAATCGTCAAAGCTTCCTGTGACGGCAAATCTATGTCGGTGGaa                                                                 >  1:723852/1‑149 (MQ=21)

                                                                                    gcgagcgaAGCGAGTCATCCGGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTCTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGaa                                                                 <  2:556511/149‑1 (MQ=255)

                                                                                     cgagggaAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAAt                                                                <  2:1209811/149‑1 (MQ=255)

                                                                                      gagcgaAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACACTCTGTCGCTGGAAtt                                                               >  2:730613/1‑149 (MQ=255)

                                                                                       agcgaagcgaGTCATCCTGCACGACCCACCCCTGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCTTCCCCAAGTTCACTTTGTAAACCTCATGAACTGGTCAGTGCTTACTGTGCAAGCAACTCTATGTCGATGGCAtga                                                              >  2:619741/1‑147 (MQ=21)

                                                                                         cgaagcgaGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCCTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAgg                                                            <  2:619935/149‑1 (MQ=255)

                                                                                                  tCATCCTGCACGACCCACCAATGTACCAAGGAAACTTTTAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCAATTTGTAAACCTGATGAAATCGTCAGAGCGTACTGTGCAACCAGCTCTCCGTCGGTGTGAGTAGGCGTAAAATg                                                   >  1:299396/1‑149 (MQ=255)

                                                                                                  tCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAACGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTATACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTGGGCGTAAAATg                                                   <  2:147059/149‑1 (MQ=255)

                                                                                                   cATCCTGCACGACCCGCCAATGTAATAAAGCGCCCTTAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGa                                                  <  1:748721/149‑1 (MQ=255)

                                                                                                   cATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGa                                                  <  1:202515/149‑1 (MQ=255)

                                                                                                    aTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGAc                                                 <  2:1209755/149‑1 (MQ=255)

                                                                                                     tCCTGCACTACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACg                                                <  1:1004232/149‑1 (MQ=255)

                                                                                                      cgtGCACGACCCACCAGTAAAAAATGTCGCCCTAATGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc                                               <  2:1178117/147‑1 (MQ=255)

                                                                                                       cTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCa                                              >  2:209575/1‑149 (MQ=255)

                                                                                                           ccGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACACAGTCAGAGCTTACTGTGCAAGCAACCCTATGTCCGTGGAATTAGGCGTAAAATGCCggacccc                                          >  2:40366/2‑143 (MQ=38)

                                                                                                           aCGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCt                                          <  1:1085687/149‑1 (MQ=255)

                                                                                                           aCGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGATTACCTTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCt                                          <  1:659528/149‑1 (MQ=255)

                                                                                                           aCGACCCACCAAGGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCt                                          <  1:5844/149‑1 (MQ=255)

                                                                                                             gACCCACCAATGTAAAAAAACGACCTAAAGGCGCTGTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCCGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGc                                        >  2:912603/1‑149 (MQ=255)

                                                                                                                  accaATGTAAAAAAGCGCCCTAAAGGCGCGTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACAtt                                   <  2:491072/149‑1 (MQ=255)

                                                                                                                  accaATGGAAAAAAGCGCCCTAAAGGCGCTTTTTTTCTAATCAGGCATCCTCAATTTCCCTTTGTAAACCTGAAGACATCGTCAGAGCTTACTGTTCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACAtt                                   <  1:21717/149‑1 (MQ=255)

                                                                                                                      aTGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGc                               <  1:271950/149‑1 (MQ=255)

                                                                                                                         tAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCGTCCTGCACATTAGGCGTa                            >  1:93544/1‑149 (MQ=255)

                                                                                                                         tAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTa                            >  1:93388/1‑149 (MQ=255)

                                                                                                                           aaaaaGCGCCTTTAGGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTAAt                          >  2:814983/1‑149 (MQ=255)

                                                                                                                             aatccacccTGAAGGCGCTTTTTTGCTATTCAGGCATCCTCAACTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACAGTAGGCGTAATTc                        <  2:237486/143‑1 (MQ=255)

                                                                                                                             aaaGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTAATTc                        <  1:880263/149‑1 (MQ=255)

                                                                                                                               aGCGCCCTAAAGGCGCTTTTTTacattggtgggtcgtgtaggatgactcgcttcgctcgcccttcgggccgtcgccgcgagcggctccgttgtttcgctgcgctcaactcaaacctgctgcaggttcgaatcttttagtatcgcagata                      >  2:267227‑M1/1‑22 (MQ=255)

                                                                                                                                           ttgcTGTTTTGTGATTCAGGCGTCCTCAATTCGACGTTGTTAACCTGATGACATCGTCAGGGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAGAATGTCGCATCCTGCACATTAGGCGTAATTCGAGTGACTTTTccc          <  2:486049/147‑1 (MQ=255)

                                                                                                                                           gcgcTTTTTTacattggtgggtcgtgcaggatgactcgcttcgctcgcccttcgggccgtcgccgcgagcggctccgttgtttcgctgcgctcaactcaaacctgctgcaggttcgaatctttgagtatcgcagatagtaaaaaagcgc          <  1:1016871‑M1/149‑140 (MQ=255)

                                                                                                                                           gcgcTTTTTTGTTATTTTGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCTTAAAATGACGCATCCTGCACATTAGGCGTAATTCGAGTGACTTTTccc          >  2:52248/1‑149 (MQ=255)

                                                                                                                                           gcgcTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCTACTCTATGTCGGTGGAATTAGGCGTACAATGCCGCATCATGCACATTAGGCGTAATTCGAGTGACTTTTccc          <  2:778807/149‑1 (MQ=255)

                                                                                                                                           gcgcTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTAATTCGAGTGACTTTTccc          >  2:602637/1‑149 (MQ=255)

                                                                                                                                           gcgcTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTAATTCGAGTGACTTTTccc          >  1:434153/1‑149 (MQ=255)

                                                                                                                                            cgcTTTTTTacattggtgggtcgtgcaggatgactcgcttcgctcgcccttcgggccgtcgccgcgagcggctccgttgtttcgctgcgctcaactcaaacctgctgcaggttcgaatctttgagtatcgcagatagtaaaaaagcgcc         >  1:754618‑M1/1‑9 (MQ=255)

                                                                                                                                               ttttttCATATTCACGCATCCCCAAATTCTCTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTAATTCGAGTGACTTTTCCccacc      <  2:550191/149‑1 (MQ=255)

                                                                                                                                               tgttttacattggggggtcgtgccggatgactcgcttcgctcgcccttcgggccgtcgccgcgagcggctccgttgtttcgctgcgctcaactcaaacctgctgcaggttcgaatctttgagtatcgcagatagtaaaaaagcgccttt      <  2:390247‑M1/147‑144 (MQ=255)

                                                                                                                                                 ttttacattggtggggcgtgcaggatgcctcgcttcgctcgcccttcgggccgtccccgcgagcggctccgttgcttcgctgcgctcaactcaaacctgctgcaggtgcgaatctttgagtatcgcagatagtaaaaaagcgcctttag    <  2:870266‑M1/149‑146 (MQ=255)

                                                                                                                                                  tttGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTAATTCGAGTGACTTTTCCCCACCAtt   >  1:211302/1‑149 (MQ=255)

                                                                                                                                                   ttacattggtgggtcgtgcaggatgactcgcttcgctcgcccttcgggccgtgggcgcgagggggtccgttgtttcgctgcgctcaactcaaacgtgctgcaggttcgaattcttgcgtatcgcagatagtaaaaaagcgcctttaggg  >  2:316503‑M1/1‑2 (MQ=255)

                                                                                                                                                   ttacattggtgggtcgtgcaggatgactcgcttcgctcgcccttcgggccgtcgccgcgagcggctccgttgtttcgctgcgctcaactcaaacctgctgcaggttcgaatctttgagtatcgcagatagtaaaaaagcgcctttaggg  >  1:167993‑M1/1‑2 (MQ=255)

                                                                                                                                                   ttGCTATTTAGGCTTCCTCAATTTCACTTATTTAACCTGATGACATCGCCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTc  <  1:383892/149‑1 (MQ=255)

                                                                                                                                                   ttGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTc  >  1:1217317/1‑149 (MQ=255)

                                                                                                                                                   ttGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTc  <  1:209575/149‑1 (MQ=255)

GCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCACATTAGGCGTAATTCGAGTGACTTTTCCCCACCATTC  >  CP009273/777147‑777442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.