New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 777295	86 (1.230)	5 (0.080)	6/254	NT	6.8%	intergenic (+187/‑246)	lysQ/nadA	tRNA‑Lys/quinolinate synthase, subunit A
	?	CP009273	= 2514847	58 (0.900)					noncoding (575/1345 nt)	IS186	repeat region

CCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGCTTAACCATCGCGGGCGTCA  >  CP009273/2514701‑2514995                                                                                                                                                   |                                                                                                                                                     cccTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaa                                                                                                                                                    >  1:167993‑M2/1‑147 (MQ=255) cccTAAAGGCGCTTTTTTACTATCTGCGATACGCAAGAATTCGAACCTGCAGCACGTTTGAGTTGAGCGCAGCGAAACAACGGACCCCCTCGCGCCCACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaa                                                                                                                                                    >  2:316503‑M2/1‑147 (MQ=255)   cTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGCACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAGCAACGGAGCCGCTCGCGGGGACGGCCCGAAGGGCGAGCGAAGCGAGGCATCCTGCACGCCCCACCAATGTaaaa                                                                                                                                                  <  2:870266‑M2/149‑5 (MQ=255)     aaaGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCGGCACGACCCCCCAATGTaaaaca                                                                                                                                                <  2:390247‑M2/149‑7 (MQ=255)        ggCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaaaaaagcg                                                                                                                                             >  1:754618‑M2/1‑140 (MQ=255)         gcgcTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaaaaaagcgc                                                                                                                                            <  1:1016871‑M2/149‑11 (MQ=255)              tttttACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaa                                                                                                                                       <  1:43549/149‑1 (MQ=32)                     tATCTGCGATACTAAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTACACGACCCACCAATGTaaaaaagcgcctttagggcgct                                                                                                                                >  2:267227‑M2/1‑127 (MQ=255)                                 tCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCt                                                                                                                    >  1:1118989/1‑149 (MQ=31)                                 tCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCt                                                                                                                    >  2:3566/1‑149 (MQ=31)                                 tCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCt                                                                                                                    >  1:2824/1‑149 (MQ=31)                                   aaaGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGc                                                                                                                  >  2:715476/1‑149 (MQ=32)                                   aaaGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTAATGCCCCACTACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGc                                                                                                                  >  1:847708/1‑149 (MQ=11)                                           gAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAACGCCCTAAAGGCGCTTGTTTGCCACCTGGGATTTGCg                                                                                                          >  2:692159/1‑149 (MQ=11)                                             aCCTGGCGCAGGTTTGGGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGaa                                                                                                        <  2:210121/149‑1 (MQ=255)                                                tgcacgcgggtggggttgggCGCAGCGAACACACGGAGCCGCTCCCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAAtt                                                                                                     <  2:524825/135‑1 (MQ=14)                                                tGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAAtt                                                                                                     <  2:850475/149‑1 (MQ=255)                                                tGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAAtt                                                                                                     <  1:266408/149‑1 (MQ=255)                                                   agcagGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGcc                                                                                                  <  2:335199/149‑1 (MQ=255)                                                    gcgggTGTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCCATCTGCGATTTGCGAAATTGCCt                                                                                                 <  1:619456/146‑1 (MQ=255)                                                    gcagGTTTGAGTCGAGCGCAGCGAAACAACGGAGCCGCCCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAACGTAAAACAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCt                                                                                                 <  1:870266/149‑1 (MQ=255)                                                    gcagGTTGGGGTTGAGCGCAGCGGAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCt                                                                                                 <  1:155003/149‑1 (MQ=255)                                                      agttttGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGa                                                                                               <  2:237639/146‑1 (MQ=255)                                                      aggttttgtgtgagGGCAGCGAAACAACGGATCCCCTCGCTGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGa                                                                                               <  1:942570/139‑1 (MQ=17)                                                       ggTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGAt                                                                                              <  1:1233059/149‑1 (MQ=255)                                                                 gagCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACt                                                                                    <  2:678995/149‑1 (MQ=255)                                                                           aaaCAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAACGCCCTAAAGGCGCTTTTTTGCTCTCTGCGATTTGCGGAATTGCCCGCTGCGCTTCACttcaccgccta                                                                          >  2:1095470/1‑140 (MQ=17)                                                                            aacaacGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGactcc                                                                         >  2:1195981/1‑147 (MQ=255)                                                                             acaacGGAGCCGCCCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGactact                                                                        <  2:936877/149‑1 (MQ=255)                                                                                    atccGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTTCGATTTGCGAACTTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCg                                                                 <  1:1070314/147‑1 (MQ=255)                                                                                    aGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCg                                                                 <  1:103343/149‑1 (MQ=255)                                                                                     gCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCCAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCgg                                                                <  1:194382/149‑1 (MQ=255)                                                                                        gCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCag                                                             >  1:132992/1‑148 (MQ=255)                                                                                         cTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAAt                                                            >  1:921733/1‑149 (MQ=255)                                                                                          tCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGCTTTGAGCAATTGCCTGATCCGCTTCACTCAGCAGGCTACTATTTCCgtccagt                                                           >  2:854423/1‑143 (MQ=18)                                                                                           cgcgGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTc                                                          <  1:686712/149‑1 (MQ=255)                                                                                            ggggcgTCGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTcc                                                         <  2:491688/147‑1 (MQ=255)                                                                                            gcggcgACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTcc                                                         <  1:761518/149‑1 (MQ=255)                                                                                             cggcgACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCt                                                        <  1:1230395/149‑1 (MQ=255)                                                                                             cggcgACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCGGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCt                                                        <  1:161741/149‑1 (MQ=255)                                                                                                    ggCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTctcct                                                 <  1:97744/149‑1 (MQ=255)                                                                                                    ggCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCATCACTTAGCAGACTACTATTTCCGGCAATTCCTGTctcct                                                 >  1:1210807/1‑149 (MQ=255)                                                                                                    ggCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTATGATATGGCCGGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTctcct                                                 <  1:550263/149‑1 (MQ=21)                                                                                                    ggCCCGAAGGCCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTctcct                                                 <  1:1075014/149‑1 (MQ=255)                                                                                                     gCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTctcctc                                                >  1:428486/1‑149 (MQ=255)                                                                                                       ccaaaGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCAc                                              <  1:1202700/146‑1 (MQ=255)                                                                                                       ccGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGCAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCAc                                              <  1:1031490/149‑1 (MQ=255)                                                                                                        cGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCAcc                                             >  2:728884/1‑149 (MQ=255)                                                                                                        cGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGAGGCGCTTCACTTAGCCGACTACTATTTCCGGCAATTCCTTTCTCCTCGcc                                             >  1:99719/1‑149 (MQ=255)                                                                                                              gcgagcgaAGCGAGTCATCCTGCACGACCCACCAATGTaaaaaagcgccctaaaggcgcgtttttgcattggtgggtcgtgcaggatgactcgcttcgctcgcacttcgggccgtcgccgcgagcggctccgttgtttcgcggagctca                                       <  1:1121106‑M2/149‑112 (MQ=255)                                                                                                                gagcgaAGCGAGTCATCCTGCACGACCCACCAATGTaaaaaagcgcctttagggcgcttttttacatacgtgggtcctgcaggatgactcgcctcccccgcccatcgggccgtcgccgcgaccggcccccttgcttcgctccgctcacc                                     <  2:1084301‑M2/149‑114 (MQ=255)                                                                                                                 agcgaagcgaGTCATCCTGCACGACCCACCAATGTaaaaaagcgccctaaaggcgcttttttacattggtgggtcgtgcaggatgactcgcttcgctcgcccttcgggccgtcgccgcgagcggctccgttgtttcgctgcgctcaact                                    <  2:1103703‑M2/149‑115 (MQ=255)                                                                                                                     aagcttggcATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATg                                <  1:1231768/141‑1 (MQ=255)                                                                                                                       gcgaGTCATCCTGCACGACCCACCAATGTaaaaaagcgccctaaaggcgcttttttgcattggtgggtcgtgcaggatgactcgcttcgctcgcccttcgggccgtcgccgcgagcggctccgttgtttcgctgcgctcaactcaaacc                              <  1:1063447‑M2/149‑121 (MQ=255)                                                                                                                        cgaGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAg                             <  1:3566/149‑1 (MQ=255)                                                                                                                        cgaGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAg                             <  2:2824/149‑1 (MQ=255)                                                                                                                         gaGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTGCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGc                            >  1:718013/1‑149 (MQ=255)                                                                                                                          aGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCCATTCCTGTCTCCTCACCTACTGTTGCAATGCAGcc                           >  2:709603/1‑149 (MQ=255)                                                                                                                            tCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCaa                         <  2:1118989/149‑1 (MQ=255)                                                                                                                             cATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGGAATTGCCTGATGCGCTTCACTTAGCAGACTACGATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAAc                        >  2:70406/1‑149 (MQ=255)                                                                                                                               tgcTGCAAGACCTACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAg                      <  2:847708/147‑1 (MQ=255)                                                                                                                               tCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAg                      >  1:965362/1‑149 (MQ=255)                                                                                                                                ccTGCCCGACCCACCAATGTAAAAAAGCGCCCTGAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGc                     <  2:390120/149‑1 (MQ=255)                                                                                                                                    cACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGTCAATTCCTGTCTCCTCACCTACTGTGGCAATGCAGCCAACAGCTTaa                 >  1:1201588/1‑149 (MQ=255)                                                                                                                                    cACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTACGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGAGGCAACGCAGCCAACAGCTTaa                 >  2:1158445/1‑149 (MQ=255)                                                                                                                                     acaaCCCACCAATGTAACAAAGCGCCCTATAGTCGCTTTGTTGCTATGTGCGCTTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGCTTAAc                <  1:251160/146‑1 (MQ=255)                                                                                                                                          ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGCTTAACCATcg           <  1:10936/149‑1 (MQ=255)                                                                                                                                          ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACCGTGTCAATGCAGCCAACACCTTAACCATcg           >  2:276896/1‑149 (MQ=255)                                                                                                                                           caccaATGTAAAAAAGCGCCCTAAAGGCGACCCTTCGCCTTCTGCGCTTTGCGAAATTGCCTGATGCGCTTGACTTAGCAGCCTACTATTTCCGGCAATTCCTGTCTCCTTACCTACTGTGTCAATGCAGCCCACAGCTTAACCATccc          >  1:606142/1‑147 (MQ=255)                                                                                                                                            accaATGTAAAAAGGCGCCCTAAGGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGCTTAACCATcgcg         <  2:374676/149‑1 (MQ=255)                                                                                                                                               aaTGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGCTTAACCATCGCGGGc      >  2:963733/1‑149 (MQ=255)                                                                                                                                                 tGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGCTTAACCATCGCGGGCGt    >  2:1083775/1‑149 (MQ=255)                                                                                                                                                  gTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGCTTAACCATCGCGGGCGTc   >  1:719836/1‑149 (MQ=255)                                                                                                                                                  gTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGCTTAACCATCGCGGGCGTc   >  1:719859/1‑149 (MQ=255)                                                                                                                                                   tAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGCTTAACCATCGCGGGCGTCa  >  1:520596/1‑149 (MQ=255)                                                                                                                                                   tAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGCTTAACCATCGCGGGCGTCa  >  1:838761/1‑149 (MQ=255)                                                                                                                                                   tAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTAATTGCGGATGTTCCCGTCTCCTCACCTACTGTGTCAATGCAGCACACAGCTTAAACATCGCGGGCGTCa  >  1:596521/1‑149 (MQ=38)                                                                                                                                                   |                                                                                                                                                     CCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATTTGCGAAATTGCCTGATGCGCTTCACTTAGCAGACTACTATTTCCGGCAATTCCTGTCTCCTCACCTACTGTGTCAATGCAGCCAACAGCTTAACCATCGCGGGCGTCA  >  CP009273/2514701‑2514995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.