Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC	CP009273	1,716,881	(GAT)4→3	7.0%	coding (504‑506/2013 nt)	ydhK →	putative efflux protein (PET) component of YdhJK efflux pump

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1716873 =	58 (0.830)	4 (0.060)	4/254	NT	7.0%	coding (496/2013 nt)	ydhK	putative efflux protein (PET) component of YdhJK efflux pump
	?	CP009273	= 1716869	53 (0.820)					coding (492/2013 nt)	ydhK	putative efflux protein (PET) component of YdhJK efflux pump

CGCGTATGCATTTCAACTGGCGGGCTACACGGCTGCCATCATCGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTG  >  CP009273/1716731‑1717020                                                                                                                                               |                                                                                                                                                    cgtcgcggatccatttcaactggcgggctacacggctgccatcagcgcctttccgatggttaatattactgaggccagccagctgtgggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcatgatga                                                                                                                                               >  1:110586‑M1/143‑149 (MQ=255)   tcgcgtatgcatttcaactggcgggctacactgctgccatcatcgcctttccgatggttaatattactgaggccagccagttgccggttattgcttaggcaagcagtggcgaggtaatagtcggtattttgtgcggcggcatgatgatg                                                                                                                                             >  1:1220064‑M1/141‑149 (MQ=255)     tATGCATTTCAACTGGCGGGCTACACGGCTGCCATCATCGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATgatgatgatgat                                                                                                                                           >  1:514333/1‑149 (MQ=255)      aTGCTTTTCACCTGGCGGGCTACTCGGCTGCCATCATCGCCTTTCCGATGGTTAATCTGACTGAGCCCAGCCAGCTGTGGGTTATCGCTCAGGCGCGCGTTTGCGAGGTATCAGTCGCTTTTTTGTGGGGCGGCattatgttgattttc                                                                                                                                          <  2:240387/149‑5 (MQ=255)      aTGCATTTCAACTGGCGGGCTACACGGCTGCCATCATCGCCTTTCCGATGGTTAATCTTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATc                                                                                                                                          <  2:951561/149‑1 (MQ=255)          aTTTCAACTGGCGGGCTACACGGCTGCCATCATCGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGCTATCGCTCAGGCAACAAAAGGCTTGGGGATAGTCGGTATTTTGTGCGGCGGCGTGATGATGATTATCGTGc                                                                                                                                      >  1:847162/1‑149 (MQ=255)           gcatttcaactggcgggctacacggctgccatcatcgcctttccgatggttaatattactgaggccagccagctgtgggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcATGATGATGATCCTGcc                                                                                                                                     <  1:355174‑M1/17‑1 (MQ=255)             atttcaactggcgggctacagggctgccatcatcgcctttccgatggttaatattactgaggccagccagctgtgggatatcgctcaggagcgagtttgcgaggtgatggccggtattttttgaggcggcATGATGATGATGCTGCcgc                                                                                                                                   <  2:865182‑M1/19‑2 (MQ=255)                       ggCTACACGGCTGCCATCATCGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGa                                                                                                                         <  2:755118/149‑1 (MQ=255)                         cTACACGGCTGCCATCATCGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATg                                                                                                                       <  1:535675/149‑1 (MQ=255)                            cacGGCTGCCATCATCGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGGTCCTGCCGAGCAGTTCCGATGCtc                                                                                                                    >  1:1196598/1‑148 (MQ=255)                               ggCTGCCATCATCGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTg                                                                                                                 <  1:1199437/149‑1 (MQ=255)                                gCTGCCATCATCGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGAGGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGc                                                                                                                >  2:552697/1‑149 (MQ=255)                                      gccatcatcgcctttccgatggttaatattactgaggccagccagctgggggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCtttt                                                                                                          >  1:461924‑M1/106‑149 (MQ=255)                                        catcGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTaa                                                                                                        <  1:780219/149‑1 (MQ=255)                                           cGCCTTGCCGATGGTTAATATTAGTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGACGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCg                                                                                                     <  2:778826/149‑1 (MQ=255)                                                  ccGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGaa                                                                                              <  2:1067505/149‑1 (MQ=255)                                                   cGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGaaa                                                                                             >  1:376605/1‑149 (MQ=255)                                                    gATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGGGGTAATAGTCGGTATTTTGTGCGGCGGCATGCTGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTGAACCGCATTGaaaa                                                                                            >  2:1043200/1‑149 (MQ=255)                                                     aTGGTTAATCTTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGCAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGaaaaa                                                                                           <  2:677663/149‑1 (MQ=255)                                                      tGGTTAAGATTACGTAGGCCACCCAGCTGTGGGATATCGCTCTGGCGCGCGTTTTCGAGGTAATAGTCGTTATTTTGTGCGGCAGCAGGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAAc                                                                                          <  2:460026/149‑1 (MQ=255)                                                        gTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACAt                                                                                        >  2:1172435/1‑149 (MQ=255)                                                        gTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATGTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACAt                                                                                        >  1:515974/1‑149 (MQ=255)                                                         ttAATATTCCGGAGGCCGGCCAGCTGGGGGGTGTCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATg                                                                                       <  2:256020/149‑1 (MQ=255)                                                              atTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGATGTAATAGTCGGTATTTTGTACGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTAATGCCGTTTTAACCGCATTGAAGAACCTTCACGc                                                                                  >  2:473328/1‑149 (MQ=255)                                                              atTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGc                                                                                  >  1:1192663/1‑149 (MQ=255)                                                                   tGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGGGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATCCACGCCCGag                                                                             >  1:1013261/1‑148 (MQ=255)                                                                   tGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGAGTTGGCGAGGTAATAGTCGGAATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCGTTTAACCGCATGGAAAAACATGAACGCCAGAt                                                                             >  1:617836/1‑149 (MQ=255)                                                                       gccagccaGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATCGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGACCAGTTCCGATGCTACTGCCCTTTTAACCGCACGGAAAAACATGCACGCCCGATTACt                                                                         >  2:730609/1‑149 (MQ=255)                                                                             cagcGGTGGGATATCGCTCAGGTGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACa                                                                   <  2:672161/149‑1 (MQ=255)                                                                               gcTGTGGCATCTCGCTAAGGGCCGCGTTTGTGAGGTAATAGCCGGTATTTTTTGCGGCGGTATGATGATGATCACTCCGCTGCGCAGTTCCGATGCTACTGCCCTTTTCCCCGCCTTGAAAAACCTGCACGCCCGATTACTGGAACATg                                                                 <  2:476186/149‑1 (MQ=255)                                                                                cTGTGGGATATCGCTCAGGCGCGCGTTTGCGGGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGc                                                                >  1:963041/1‑149 (MQ=255)                                                                                 tgtgGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGAACCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATCACTGGAACATGcc                                                               >  2:1052133/1‑149 (MQ=255)                                                                                   tgGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAg                                                             >  1:123736/1‑149 (MQ=255)                                                                                   tgGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAg                                                             >  2:370664/1‑149 (MQ=255)                                                                                           cGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTActct                                                     >  2:665751/1‑149 (MQ=255)                                                                                             cTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTgg                                                   <  2:758031/149‑1 (MQ=255)                                                                                             cTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTCCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTgt                                                   <  2:1134976/149‑2 (MQ=255)                                                                                              tCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGGGCAGTTCCGATGCTACTGCCCTTTTAACCGCAATGAAAATCATGCACGCCCGATTGCTGGAACATGCCCGTCTAcacagaa                                                  <  2:858987/149‑7 (MQ=255)                                                                                                 ggCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGc                                               <  1:224572/149‑1 (MQ=255)                                                                                                  caggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAAAATGCAGGCCCGATTACTGGAACCTGCCCATTTAATCTCGCAGcc                                              <  2:572936‑M1/104‑1 (MQ=255)                                                                                                   cgcgcgTTTGCGAGGTAATAGGCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCt                                             <  1:502207/149‑1 (MQ=255)                                                                                                      ggggttGCGAGGTAATAGTCGGTATGTTGGGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTCACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGaa                                          <  1:294617/145‑1 (MQ=255)                                                                                                       cattcgCGATGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGaaa                                         <  1:1187249/144‑1 (MQ=255)                                                                                                          ttGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAAAATGCAAGTTTACTCTGGCATCCTGAaccaa                                      >  2:1119008/1‑149 (MQ=255)                                                                                                             cGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACCTGCCAGTTTACTCTGGCAGCCTGAAACAACCg                                   >  2:407672/1‑149 (MQ=255)                                                                                                              gAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAATACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGa                                  <  1:548595/149‑1 (MQ=255)                                                                                                              gAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGa                                  <  1:1234658/149‑1 (MQ=255)                                                                                                                      aGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTc                          >  1:824950/1‑149 (MQ=255)                                                                                                                        tCGGTATTTTGTGCGGCGGCATGATAATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGCTTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCCAGGCCATTCgg                        >  1:639524/1‑148 (MQ=255)                                                                                                                         cGGTATTTTGTGCGGCGTTATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTTCTGCCCCTTTAACCGCATTGAAAAACATGCACGCCCGACTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTg                       <  2:618626/149‑1 (MQ=255)                                                                                                                           gTATTTTGTGCGGCGGCATGATGATGATGCTCCTGCCCGGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTgca                     <  1:1151454/149‑1 (MQ=255)                                                                                                                            tATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTgcag                    >  2:557075/1‑149 (MQ=255)                                                                                                                              ttttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTCCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACAGGCACGCCCGATTACTGGAACATGCCAGTCTACCCTGGCAGCCTTAAACAACCGATGCCATTCGTgcagcc                  <  1:250725/149‑2 (MQ=255)                                                                                                                               tttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGcac                 >  2:767738/1‑149 (MQ=255)                                                                                                                                ttGTGCCGCGGCATGATGATGATGAGCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAAGAACCGATGCCATTCGTGCAGcaca                <  2:1197084/149‑1 (MQ=255)                                                                                                                                   tgCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACCACCGATGCCATTCGTGCAGCACATGa             >  1:187479/1‑149 (MQ=255)                                                                                                                                     cggcggCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAg           <  2:1213947/149‑1 (MQ=255)                                                                                                                                     cggcggCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTCAACCGCACTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTTAAACAACTGATGCCATTCATGCAGCACATGAAg           >  1:756506/1‑149 (MQ=255)                                                                                                                                      ggcggcATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCCCGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAgc          >  2:316908/1‑148 (MQ=255)                                                                                                                                      ggcggcATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTTCAGCAAATGAAgg          >  2:139977/1‑149 (MQ=255)                                                                                                                                      ggcggcATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGAGGCCATTCGTGCAGCACATGAAgg          >  2:597433/1‑149 (MQ=255)                                                                                                                                       gcggcATGATGATGATGATGCTGCCGAGCAGTTCCGACTCTGCTGCCCTTTTGACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAggg         <  2:681627/149‑1 (MQ=255)                                                                                                                                         ggcATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGt       <  2:649817/149‑1 (MQ=255)                                                                                                                                            atgatgctgatgATCCTGCCGAGTAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGATTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGAt    <  2:778043/149‑1 (MQ=255)                                                                                                                                              gatgatgatgatCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGGTTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGGTTg  >  1:402306/1‑149 (MQ=255)                                                                                                                                              gatgatgatgatCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTg  >  1:1233722/1‑149 (MQ=255)                                                                                                                                              gatgatgatgatCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGGGATTg  >  1:705798/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                    CGCGTATGCATTTCAACTGGCGGGCTACACGGCTGCCATCATCGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTG  >  CP009273/1716731‑1717020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.