New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2420396	11 (0.110)	100 (0.990)	66/296	0.5	90.1%	intergenic (‑129/+92)	hisJ/argT	histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit
	?	CP009273	3576788 =	NA (NA)					intergenic (+10/‑55)	yrhA/insA	pseudogene, interrupted by IS1E/IS1 repressor TnpA

ATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2420249‑2420396 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCT  >  CP009273/3576788‑3576934                                                                                                                                                                                                                                                                                                         ATAGCATCAGTTCTTTCATAATGTCCTCGACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTG                                                                                                                                                    <  1:373639/149‑1 ATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTGGACGTATTATTTTTCATTAAAAATGCTG                                                                                                                                                    >  2:842088/1‑149     CACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGA                                                                                                                                                >  2:471930/1‑149      ACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTGTAGGGAATATTTACAGGTTTGTTAGACTTATCGTGCTATGAAATTGATCATAAAGGCAACATATCCCGTTCCGTTATACGTATTATTTTTCATTAAAAATGCTGGTGct                                                                                                                                               >  1:742530/1‑147       CCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATG                                                                                                                                              >  2:654943/1‑149        CAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACTGGTTTGTTACTCTTATCGTGCCATAAGATTGACCATTATGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGC                                                                                                                                             <  2:105109/149‑1        CAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATACAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATACTGGTGACGC                                                                                                                                             >  1:1641887/1‑149        CAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGC                                                                                                                                             >  2:746184/1‑149        CAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGC                                                                                                                                             >  2:686456/1‑149        CAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGC                                                                                                                                             >  1:472719/1‑149        CAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGC                                                                                                                                             >  2:661041/1‑149        CAGTTTTTGCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGC                                                                                                                                             >  1:522993/1‑149         AGTTTTTGCATATTCTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATAAAAAAAAAAAAAAAATGCTGGTGATGCT                                                                                                                                            <  1:1621554/149‑1           TTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGTGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCAGCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGC                                                                                                                                          <  2:552179/149‑1            TTTTTCATAATGCCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGTCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCC                                                                                                                                         <  2:1137883/149‑1             TTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTTATGCTGCCA                                                                                                                                        >  2:857217/1‑149             TTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCA                                                                                                                                        >  2:1644373/1‑149              TTTCATAATGTCCTCAACTGACAGTCTTTTTATAGTGCTTATTTTCAGGTTTGTTACACTTATCGTGCCATAAAATTGTCCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAA                                                                                                                                       <  2:746501/149‑1              TTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCTAA                                                                                                                                       >  1:312036/1‑149               TTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTGTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAAC                                                                                                                                      <  1:493228/149‑1                TCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACT                                                                                                                                     <  2:1446483/149‑1                  ctcATGTCCTCGACTGACAGTCTTTTTATAGGGCATACTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTA                                                                                                                                   <  1:250386/146‑1                    AATGTCCTCAACTGACAGTCTTTTTATTGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACTATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACT                                                                                                                                 <  2:1148899/149‑1                    AATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCCTTAAAAATGCTGGTGATGCTGCCAACTTACT                                                                                                                                 >  2:500859/1‑149                     ATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTCCTG                                                                                                                                >  1:944251/1‑149                     ATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTG                                                                                                                                >  2:569269/1‑149                          caCAACTGACAGTCGTTTTATAGGGAATATTTACAGGTCTGTTACCCTTATCGGGCCATAAAACTGACCATCAAGGCAACATATCCCGCCCCGTTATACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTA                                                                                                                           <  1:485108/147‑1                          CTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCAACAAGGCAACATATCCCGCCCCGATAGACGTATTATTTTTCATTAAAAATGCTGGTGACGCTGCCAACCTACTGActca                                                                                                                           >  1:236137/1‑145                           TCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAG                                                                                                                          >  1:1250157/1‑149                           TCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTACCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAG                                                                                                                          >  2:1179450/1‑149                            CAACTGACTGTCTTTTTATAGGTAGTATTTTCAGGTTTGTTACACTTATCGTGCCATAATATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGT                                                                                                                         <  2:275548/149‑1                            CAACTGACAGTCTTTTTATAGGGAATATTTACAGTTTTGTTACACTTATCGTGCTATAAAATTGACCATCAAGGCAACATATCCCGACCCGTTAGATGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGT                                                                                                                         <  2:1300947/149‑1                                  ACAGTATTTTTAGAGGGAATATTTACAGGTTTGTTACCCTTATCGTGCCATAAAATTGACCATCAAGGCAACAAATACCGCTCCGTTGTTCGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGA                                                                                                                   <  1:1495994/149‑1                                    AGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCCAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTCACTGATTTAGTGTATTATG                                                                                                                 >  2:535289/1‑149                                    AGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                                                                 <  1:1321026/149‑1                                    AGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                                                                 <  2:1583093/149‑1                                    AGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                                                                 <  1:438580/149‑1                                      TCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT                                                                                                               >  2:1101069/1‑149                                      TCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTCGGACGTATTATATTGCATGAAAAATGCTGGTGATACAGCCAACTTACTGATTTAGTGTATGATGGT                                                                                                               >  1:1407408/1‑149                                         TTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTT                                                                                                            >  2:1583692/1‑149                                              tatgaAATATGTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGA                                                                                                       <  1:654943/144‑1                                              TAGGGAATATTTACAGGTTTGTTACACGTAGCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGA                                                                                                       <  1:1616086/149‑1                                               AGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                                                                                      <  2:184453/149‑1                                               AGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGACGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                                                                                      <  2:742530/149‑1                                                GGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                                                                     <  2:739251/149‑1                                                GGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAAATGACCATCAAGGCAGCATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAGCTTACTGCTTTAGTGTATGAGGGTGTTTTTGAGG                                                                                                     >  1:8882/1‑149                                                 GGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTACAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTGTGATGGTGTTTTTGATGT                                                                                                    >  1:1187087/1‑149                                                 GGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                                                                                    >  1:1001766/1‑149                                                   cATATTCTCAGGATTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATGAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGATTATGAGGGTGTTTTTGAGGTGC                                                                                                  >  1:283886/2‑149                                                   AATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATGTACCATCAAGGCAACCTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGC                                                                                                  <  2:135972/149‑1                                                    ATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCT                                                                                                 <  1:1101069/149‑1                                                     ttTTTACAGGGCTGTGTCACTTATCGTGCCATAAATTGGACCATCAAGGTAACATAGCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACGTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTC                                                                                                <  2:758405/147‑1                                                     TATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCTACATTTCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTC                                                                                                <  2:132678/149‑1                                                       TTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATGCCTCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA                                                                                              >  2:1551980/1‑149                                                              tTTTGTT‑CATTTATCGTGCCATAAAATTGACCATCAAGGGAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                                                                                      <  2:977731/148‑1                                                              GTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTT                                                                                       >  1:638711/1‑149                                                               TTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                                                                                      <  1:471930/149‑1                                                                   TTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTT                                                                                  >  2:895077/1‑149                                                                   TTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTT                                                                                  >  1:1343958/1‑149                                                                   TTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTT                                                                                  >  2:276300/1‑149                                                                     ACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTC                                                                                <  2:1255848/149‑1                                                                       ACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGTCTTCTGTTTCTg                                                                              >  1:909388/1‑148                                                                        CTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGGGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT                                                                             <  2:1456973/149‑1                                                                        CTTATCGTCCCATAAAATTGACCACCAAGGCAACATATCCCGCCCCTTTAGACGTATTATTTTTCATTAAACATTCTGGTGATGCCGCCAACTTCCTTGTTTATTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT                                                                             <  1:686456/149‑1                                                                         ggATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATC                                                                            <  1:817401/147‑1                                                                         TTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATC                                                                            <  1:1189712/149‑1                                                                         TTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATC                                                                            >  2:1199121/1‑149                                                                         TTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATC                                                                            >  1:1612388/1‑149                                                                               TGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGT                                                                      <  1:1514061/149‑1                                                                                    TAAAATTGACACTCAAGGCAACAAACCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC                                                                 <  1:842088/149‑1                                                                                         TTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT                                                            <  2:1080584/149‑1                                                                                           GACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTCGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCA                                                          <  1:296710/149‑1                                                                                               ATCAAGGCCACATATCCCGCCCCGTTAGCCGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCACACTTACAGATTTAGTGTATGATGTTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTA                                                      >  2:1458604/1‑149                                                                                               ATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTACCTCGAAATGCAGATAATGCAACCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTA                                                      >  2:1625382/1‑149                                                                                                   AGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA                                                  >  2:1445828/1‑149                                                                                                    GGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAC                                                 >  2:22992/1‑149                                                                                                    GGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAC                                                 >  1:450962/1‑149                                                                                                      catctTATCCCGCCCCGTTTGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTATTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGG                                               <  2:1231120/144‑1                                                                                                      CAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTGCTATCAGCTGTCCCTCCTGTTCAGCTACTCACGG                                               >  2:2723/1‑149                                                                                                       aacATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGTGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCGCTCATGTTCAGCTAGTGAAGGG                                              >  1:487417/4‑149                                                                                                         cATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACGGATTACGAGTATGAGGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATGAGCTGTCCCTCCTGTTCAGCTACTGCCGGGGT                                            >  1:248310/2‑149                                                                                                          ATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTTGCCTCGGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTG                                           <  1:1086961/149‑1                                                                                                            ATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGT                                         <  1:1336270/149‑1                                                                                                            ATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGT                                         <  1:746184/149‑1                                                                                                            ATCCCGCCCCGTTAGACGTATTATGTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGAGTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGT                                         <  1:899919/149‑1                                                                                                              CCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGC                                       <  2:1530907/149‑1                                                                                                                CGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCATCTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTAATCTACTGCCGGGGTGGTTCGT                                     >  2:555710/1‑149                                                                                                                CGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGT                                     >  2:1284594/1‑149                                                                                                                 GCCCCGTTAGACGTATTATTTTTCAGTAAAAATGCTGGTGATGCTGCCAACTTGCTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTA                                    >  2:825529/1‑149                                                                                                                        TAGACGTATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAA                             <  1:22992/149‑1                                                                                                                               ATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACC                      >  1:422486/1‑149                                                                                                                               ATTATTTTTCATTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGGGCGTAACGGCAAAAGCACC                      >  1:1649178/1‑149                                                                                                                                   TTTTTCATTAAAAATGCTGGTGCTGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCG                  <  1:1621029/149‑1                                                                                                                                         cTTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGTGGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGGACCGCCGGACATC            <  2:1122202/148‑1                                                                                                                                          TTAAAAATGCTGGTGATGCTGCCAACTTACTGATTTCGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCCCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCA           <  2:191941/149‑1                                                                                                                                            AAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGC         <  1:276300/149‑1                                                                                                                                            AAAAATGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGGCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGC         <  2:317169/149‑1                                                                                                                                            AAAAATGCTGGTGATGCTGCCAACCTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCGGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGC         <  2:401291/149‑1                                                                                                                                                 TGCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAT    >  2:1462664/1‑149                                                                                                                                                   CTGGTGATGCTGGCAACTTACTGATTTAGTGTATGATGGTGTTGTGGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCT  <  2:438852/149‑1                                                                                                                                                                                                                                                                                                         ATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2420249‑2420396 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCT  >  CP009273/3576788‑3576934

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.