Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908 258683 776 77 [0] [0] 77 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)76 (0.770) 54/454 0.5 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers

TCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGACTGGAGCACACCCTGCGTGAGTTTCACGAGA  >  NC_000913/258437‑258920
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                            
tcatcatctgctgacggtaaattattagagatcccatttaacccggtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTg                                                                                                                                                                                                                                           >  1:817608‑M2/248‑251 (MQ=255)
tcatcatctgctgacggtaaattattagagatcccatttaacccggtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaattcggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgtagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggagAGTg                                                                                                                                                                                                                                           >  2:156090‑M2/248‑251 (MQ=255)
tcatcatctgctgacggtaaattattagagaacccatttaacccggtgtataggaatgttgacaaaggtcttcaggaaatcaccgactggaacgaaaaacgctagtgttaaaaatttgctaaattttgccaatttggaaaaacagttgcatcagaacaggagatagcaatgacgttacagagtggacacccgaagagaagattgataaaaaaatttaccgcactaggcacgtatagtcgtgaaggaaAgtt                                                                                                                                                                                                                                           >  2:691522‑M2/248‑250 (MQ=255)
           tgacggtaaattattagggatcccatttaacccggtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc                                                                                                                                                                                                                                <  2:1068086‑M2/15‑1 (MQ=255)
           taagcgacagttattagagtccccatttcacccggtgtatcggaagtttgacaaaggtcttcaggaaatccccgactggatcgacaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggcgatagcaatgtcgttaccgagtggacccccgaagagcagattaatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc                                                                                                                                                                                                                                <  2:755404‑M2/15‑1 (MQ=255)
            gacggtaaattattagagatcccatttaacccggtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaacgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCg                                                                                                                                                                                                                               >  2:136138‑M2/236‑251 (MQ=255)
              cggtaaattattagagatcccatttaacccggtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAt                                                                                                                                                                                                                             >  1:121590‑M2/234‑251 (MQ=255)
                 taaattatgagagatcccatttaacccggtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaaaagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCt                                                                                                                                                                                                                          <  1:156043‑M2/21‑1 (MQ=255)
                   gattaatagagagcccatgtaacccggtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttatgttaaaaatttgctaaatgttgccaatttggtaaaacagttgcatcgcaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaGGTGCAAAGATAATCGATTCttt                                                                                                                                                                                                                        <  1:441285‑M2/23‑1 (MQ=255)
                      tattagagatcccatttaacccggtgtatcggaattttgacaaatgccttcaggaaatcacctactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccacttcggtaaaacagttgcatcacaataggagatagcaatgacgttaccgagtggacaaccgaagagcagattgatcaaaaaatttaatgcactaggcccgtatattcgtgaaggtaCGTGCAGAGCTAATTGATTCTTTTTc                                                                                                                                                                                                                     >  2:121150‑M2/226‑251 (MQ=255)
                        tgagagatcccatttaacgcggtgtatcggaattttgacaaaggtctgcaggaaatcaccgactggatcgaaaaacgcctgggttaaaaatttgctaaagtttgccaatttggtcaaacagttgaatcacaacaggagatagtaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatatgcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGa                                                                                                                                                                                                                   <  2:514125‑M2/28‑1 (MQ=255)
                             gatcccatttaacccggtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTc                                                                                                                                                                                                              <  1:897854‑M2/33‑1 (MQ=255)
                               tcccatttaaaccggtgtatcggaattttgacaaaggtcttaaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaaaaggagatagcaatgacgttcacgagtggacaaccgaagagcagattgatcaaaaaatgtaccgcactaggccagcctattcgagagggtaAGTGCAAAGATAATACATTCTTTTTCgcttggatg                                                                                                                                                                                                            >  2:646491‑M2/217‑247 (MQ=255)
                                         ccctgtgtatcggaattttgacaaaagtcttcaggaaatcaccgacttgatctaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactatgcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCg                                                                                                                                                                                                  <  1:646370‑M2/45‑1 (MQ=255)
                                         cccagtgtatcggcattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttacccagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCg                                                                                                                                                                                                  <  2:759738‑M2/45‑1 (MQ=255)
                                            ggtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgtcaatttggtaaaacagttgaatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtttattcgtgaaggtaAGGTCAAAGATAACCGATTCTTTTTCGATTGTCTGGCGGTATGCGTCa                                                                                                                                                                                               >  1:618210‑M2/204‑251 (MQ=255)
                                             gtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaaaaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGa                                                                                                                                                                                                                                     >  1:51607‑M2/203‑212 (MQ=255)
                                             gtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgcaaatttggtaaaacagttgcatcgcaacaggagatagcaatgtcgttatcgagtggacacccgatgagcagattgaacaaaaaatttaccgccttaggcccgtatattcgtgaaggctAGTGCAAAGATAATCGTTTCTTTTTCGATATTCTGGCTGTATGCGTc                                                                                                                                                                                                >  2:441376‑M2/203‑249 (MQ=255)
                                             gtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaatgttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgaatattcgtgaaggtaAGTGCAAAGATAATTGATTCTTTTTCGATTGTCTGGCTGTATGCgtcca                                                                                                                                                                                              >  1:973746‑M2/203‑249 (MQ=255)
                                             gtgtatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgattgtgttaaaaatttgctaaattttgccaatttgggaaaaaagctgcatcacaataggagatagcaatgacgttaccgagaggacacccgaagagcagattgatcaaaaaattaaacgcactaggcccgtatattcgtgaaggtaAGGGCAAAGATAAACGATTCTGTTTCGAgtgtctggatgctggtgtgta                                                                                                                                                                                              >  1:755274‑M2/203‑241 (MQ=255)
                                             gtgtatcggaattttgacaaaggtcttcaggaaatcacccactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcaaaacaggagatagcaatgaagttaccgagtggacacccgaagagcagatagatcaaacaatttaccgcactaggctcgtatattcgtgaaggtaAGTGCAAGGATAAGCGATTCTTTTTAGATTGTCTGGCTGTAGGCGTCaa                                                                                                                                                                                              >  2:1025046‑M2/203‑251 (MQ=255)
                                             gtgtatcggaattttgacaaaggtctccaggaaatcaccgactggatcgaaaaacgcctgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcacgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAGTGTCTGGCTGTATGCGTaaa                                                                                                                                                                                              >  1:514012‑M2/203‑251 (MQ=255)
                                                tatcggaattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGt                                                                                                                                                                                           >  1:565453‑M2/200‑251 (MQ=255)
                                                    ggaattttgacaaaggtcttcaggaaatcaccaactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGaaa                                                                                                                                                                                       <  2:576663‑M2/56‑1 (MQ=255)
                                                      aattttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgataaaaaaatttaccgcactaggcccgtataatcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAAcc                                                                                                                                                                                     >  2:444925‑M2/194‑251 (MQ=255)
                                                          ttgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTGTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCa                                                                                                                                                                                 >  1:576547‑M2/190‑251 (MQ=255)
                                                           tgacaaaggtcttcaggaaatcaccgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCAc                                                                                                                                                                                >  2:573400‑M2/189‑251 (MQ=255)
                                                                    tcttcaggaagtcacctactggatcgaaaaacgcttgtgtgaaaaagtggcgaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAATATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGc                                                                                                                                                                       <  1:870176‑M2/72‑1 (MQ=255)
                                                                       tcaggaaatcaccgactggatcgaaaaatgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcataacaacaggagatagcaatgtcgttaacgagtggacactctacgagcagactgatcaaaaaatctaccgcactaggcccgtaacttcgagaaggtaAGTGCAAAGATAATCGATTCTTTTCTGATTGTATGGCTGTATGGGCCAAAGTGCAACCGgcacccgaatggagtg                                                                                                                                                                    >  1:118727‑M2/177‑244 (MQ=255)
                                                                                   cgactggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCt                                                                                                                                                        >  1:97525‑M2/165‑251 (MQ=255)
                                                                                        ggatcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGc                                                                                                                                                                                                                                          <  1:569896‑M2/5‑1 (MQ=255)
                                                                                          atcgaaaaacgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACTTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggat                                                                                                                                                 >  1:657615‑M2/158‑251 (MQ=255)
                                                                                            cgaaaaactcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacgacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttt                                                                                                                                                                                                                        <  1:672523‑M2/23‑1 (MQ=255)
                                                                                                  acgcttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGTCTGGTGGATGGAGCggg                                                                                                                                         >  2:1103575‑M2/150‑251 (MQ=255)
                                                                                                      ttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCGGGAAgc                                                                                                                                     >  2:595414‑M2/146‑251 (MQ=255)
                                                                                                                aatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAt                                                                                                                                                                                                                  >  2:570012‑M2/136‑164 (MQ=255)
                                                                                                                    tgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgataaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATCATCGATTCTTTTTCGATTGTCCGGTTGTTTGCGTc                                                                                                                                                                                                >  2:672641‑M2/132‑178 (MQ=255)
                                                                                                                      ctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGAGGGAGCTGGAAGCGCATGAAtcccgactt                                                                                                                     >  1:527124‑M2/130‑247 (MQ=255)
                                                                                                                      ctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatagtcgtgaaggtaAGTGCAAAGATAATCGATACTTTTTCGATTGTCTGGCTGCATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGTTGGTGGATGGTGTTGGAAGTGGtggaatccttttgt                                                                                                                     >  1:673030‑M2/130‑245 (MQ=255)
                                                                                                                                                gtttcgtagacacgggtgcaagcaataacattaccgagtggacacccgaagagtagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTCTCTGGCTGTGTGCTTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGGTGGTCGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGtt                                                                                           <  2:817754‑M2/148‑1 (MQ=255)
                                                                                                                                                gttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGtt                                                                                           <  1:1103408‑M2/148‑1 (MQ=255)
                                                                                                                                                agtgcatcacaacaggggatagcaatgacgttacagagtagacacccgaagagcaagttgatcgaaaaatttaccgcactcgggccgtatattcgtgtaggtaAGTGCAAAGCTATTCTATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGtt                                                                                           <  2:527237‑M2/148‑1 (MQ=255)
                                                                                                                                                        acaacaggaaatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAg                                                                                   <  2:565569‑M2/156‑1 (MQ=255)
                                                                                                                                                         caacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc                                                                                                                                                                                                                                <  2:325944‑M2/15‑1 (MQ=255)
                                                                                                                                                              ggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcacttggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATc                                                                                                                            <  1:649565‑M2/115‑1 (MQ=255)
                                                                                                                                                                   tagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTgg                                                                        >  1:14523‑M2/85‑251 (MQ=255)
                                                                                                                                                                      caatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGGTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAag                                                                     >  2:909790‑M2/82‑251 (MQ=255)
                                                                                                                                                                       aatgacgttaccgagtggacacccgaagagcagattgatcaaaaaagttaccgcactaggcccgtatagtcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAaga                                                                    <  1:444823‑M2/171‑1 (MQ=255)
                                                                                                                                                                        atgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAagag                                                                   <  2:682596‑M2/172‑1 (MQ=255)
                                                                                                                                                                            cgttaccgagtggacacccgaggagcagattgatcaaaaaatttaccgctctaggcccgtatattcgtggaggtaAGTGCAAAAATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCt                                                                                                                                                              <  2:419617‑M2/81‑1 (MQ=255)
                                                                                                                                                                            aatggccggggggtcacccgaaggccagattgatcaaaaaatttcccgagctaggcccgtatattcgggaaggtaAGTGCAAAGATAAGCGATGCTTTTTCGATGGTCTGGCTGTATGCGTCAACGTGAAACCGGAACCGGAAGGGCGTGGATTCGGGGGGTGGTGGATGAAGCTGGGAGGGCAGGAATCCCGTTTTAGCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGtt                                                               <  1:1064199‑M2/176‑1 (MQ=255)
                                                                                                                                                                                accgcgtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAg                                                                                                             <  2:787900‑M2/130‑1 (MQ=255)
                                                                                                                                                                                 ccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTg                                                                                                                                                                                                        >  1:325876‑M2/71‑109 (MQ=255)
                                                                                                                                                                                 ccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCTCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGGGTTCCGGt                                                          >  2:429795‑M2/71‑251 (MQ=255)
                                                                                                                                                                                 ccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCTACTGGAAGCGTGTTCcggc                                                          >  1:377371‑M2/71‑250 (MQ=255)
                                                                                                                                                                                 ccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGt                                                          >  2:370768‑M2/71‑251 (MQ=255)
                                                                                                                                                                                     gtggacacccgaaggtcagattaatcaaaaaatttaccgaccaaggcccgtatattcggaaaggtaAGTGAAAAGATAATCGTTTCTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAg                                                     <  1:136091‑M2/185‑1 (MQ=255)
                                                                                                                                                                                      tggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTGTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGtt                                                                                                    >  2:649686‑M2/66‑204 (MQ=255)
                                                                                                                                                                                          caccctaagtgcagattgatcaaaaaatttaccccaccttgcccgtatattcgtgaaggtaAGTGCAAAGATAATCGCTTCTTTTTCTATTGTCTGGCTGTTTGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGtt                                                                                                           <  1:481138‑M2/132‑1 (MQ=255)
                                                                                                                                                                                           accctaagggcagattgatcaaaaaattttccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCCATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCGCCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACt                                                <  2:97566‑M2/191‑1 (MQ=255)
                                                                                                                                                                                           acccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACt                                                <  1:370692‑M2/191‑1 (MQ=255)
                                                                                                                                                                                             ccgaagagcaaattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGa                                              <  1:595295‑M2/193‑1 (MQ=255)
                                                                                                                                                                                             ccgaagagaagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGa                                              <  2:74851‑M2/193‑1 (MQ=255)
                                                                                                                                                                                               gaagggcagattgatcaaaaaatttaccgccctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAg                                            <  1:573284‑M2/195‑1 (MQ=255)
                                                                                                                                                                                               gaagagctgattgatagacaaatttaccgaactaatcccgtatattcgtgaatgtaAGTGTAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGGATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGACTGGTGGATGGAGCTGGAGACGCAGGAATCCCTTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATATAGCATGCGACTGGAAGAGTGTTCCGGTAAAAGACACTTAAg                                            <  1:781181‑M2/195‑1 (MQ=255)
                                                                                                                                                                                               gaaaagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGGTAAGCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAg                                            <  2:14553‑M2/195‑1 (MQ=255)
                                                                                                                                                                                                 agagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGCATGGCAGAGTGTTCCGGTAAAAGACACTGACGTg                                          >  2:184024‑M2/55‑251 (MQ=255)
                                                                                                                                                                                                    gacaatttatcacaaaatttcccgccctttgcccgtatattcttgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGCAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTTGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGtt                                       <  2:64201‑M2/200‑1 (MQ=255)
                                                                                                                                                                                                        attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATaa                                                                                     >  1:787757‑M2/48‑201 (MQ=255)
                                                                                                                                                                                                          tgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGa                                 >  1:782842‑M2/46‑251 (MQ=255)
                                                                                                                                                                                                                   aatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGACTGGAGcac                        <  1:429704‑M2/215‑1 (MQ=255)
                                                                                                                                                                                                                         ccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGAAACTGAAGTGGTTGAACGACTGGAGGACACCCTg                  >  1:64160‑M2/31‑251 (MQ=255)
                                                                                                                                                                                                                            cactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAAATCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGa                                              <  1:398915‑M2/193‑1 (MQ=255)
                                                                                                                                                                                                                                       tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGACTGGAGCACACCCTGCGTGAGTTTCACga    <  1:341087‑M2/235‑1 (MQ=255)
                                                                                                                                                                                                                                        atattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGACTGGAGAACACCCTGCGTGAGTTTCCCgag   >  2:941339‑M2/16‑251 (MQ=255)
                                                                                                                                                                                                                                         tattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTTTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGACTGGAGCACACCCTGCGTGAGTTTCACgaga  <  1:691397‑M2/237‑1 (MQ=255)
                                                                                                                                                                                                                                                    gtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGACTGGAGCacac                      >  2:398996‑M2/4‑220 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                            
TCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGACTGGAGCACACCCTGCGTGAGTTTCACGAGA  >  NC_000913/258437‑258920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.