| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3518167 = | 32 (0.880) | 5 (0.150) | 5/246 | 4.1 | 14.0% | coding (320/1089 nt) | aroB | 3‑dehydroquinate synthase |
| ? | NC_000913 | 3518199 = | 31 (0.900) | coding (288/1089 nt) | aroB | 3‑dehydroquinate synthase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCCAATCATGTTTTTACCGAGGGGATGGTTGACCGCAGTTTTGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGATAACGCTATCGACGTTAACACCCGCCTGTTC > NC_000913/3518022‑3518315 | gcCAATCATGTTTTTACCGAGGGGATGGTTGACCGCAGTTTTGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTa > 6:133995/1‑149 (MQ=255) cAATCATGTTTTTACCGAGGGGATGGTTGACCGCAGTTTTGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTAcg > 3:136736/1‑149 (MQ=255) cAATCATGTTTTTACCGAGGGGATGGTTGACCGCAGTTTTGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTAcg > 3:138931/1‑149 (MQ=255) aCCGAGGGGATGGTTGACCGCAGTTTTGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAgc < 1:19549/148‑1 (MQ=255) gAGGGGATGGTTGACCGCAGTTTTGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGcca < 5:58990/149‑1 (MQ=255) aGGGGATGGTTGACCGCAGTTTTGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGccac > 5:137346/1‑149 (MQ=255) cAGTTTTGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTAcgcc > 7:135079/1‑118 (MQ=255) cAGTTTTGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTAcgcc < 8:135079/118‑1 (MQ=255) aGTTTTGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGAc < 6:137346/149‑1 (MQ=255) ttGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCAt < 4:55203/148‑1 (MQ=255) aaCGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGttttt < 4:136736/149‑1 (MQ=255) aaCGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGttttt < 4:138931/149‑1 (MQ=255) aTCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACg < 5:133995/149‑1 (MQ=255) aGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACgg > 8:123937/1‑148 (MQ=255) gtcgGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTa > 7:69571/1‑148 (MQ=255) ttGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGc > 4:9689/1‑149 (MQ=255) aaCGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATAc > 3:144676/1‑149 (MQ=255) acCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGc > 2:168748/1‑149 (MQ=255) gcgcTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTtata < 7:35815/138‑1 (MQ=255) gcgcTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTtata > 8:35815/1‑138 (MQ=255) gcgcTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGt > 4:77548/1‑149 (MQ=255) tCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGAt > 6:70655/1‑148 (MQ=255) gAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGa > 4:128239/1‑98 (MQ=255) gAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGa < 3:128239/98‑1 (MQ=255) ccGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGATAACGCTATCGACGtt < 3:9689/149‑1 (MQ=255) aGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCCCCGTCAGGGAGGATAACGCTATCGACGATAACAcc > 7:145867/1‑149 (MQ=255) gATCGCCCACTACGCCGCCGCCAAGAGAGACAAGCGTAGTATCGCGACCATGAGGTTTTTGTAACAACGCAGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGATAACGCTATCGACGTTAACAccc < 8:145867/149‑1 (MQ=255) tCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGATAACGCTATCGACGTTAACAccc > 4:79289/1‑147 (MQ=255) tCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGATAACGCTATCGACGTTAACAccc < 3:79289/147‑1 (MQ=255) cGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGATAACGCTATCg > 7:105658/1‑134 (MQ=255) cGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGATAACGCTATCg < 8:105658/134‑1 (MQ=255) cACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGATAACGCTATCGACGTTAACACCCGCCTGtt < 5:70655/149‑1 (MQ=255) aCTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGATAACGCTATCGACGTTAACACCCGCCTGTTc < 3:77548/149‑1 (MQ=255) aCTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGATAACGCTATCGACGTTAACACCCGCCTGTTc < 8:69571/149‑1 (MQ=255) | GCCAATCATGTTTTTACCGAGGGGATGGTTGACCGCAGTTTTGCCGCCAACGGAGGAATCGACCTGCGACAGTAACGTCGTCGGGACTTGAATGAAACGGACACCGCGCTGATAACTCGCCGCCGCGAAGCCGGTCAGATCGCCCACTACGCCGCCGCCAAGCGCCACCAGCGTAGTATCGCGACCATGCGGTTTTTGTAACAACGCCGTAAAGACGGTATCGAGTACAGCCAGGCTTTTATACTGCTCGCCGTCAGGGAGGATAACGCTATCGACGTTAACACCCGCCTGTTC > NC_000913/3518022‑3518315 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |