New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1259918	46 (1.270)	6 (0.170)	6/246	3.7	12.6%	coding (886/1680 nt)	dauA	C4‑dicarboxylic acid transporter
	?	NC_000913	= 1259933	40 (1.170)					coding (871/1680 nt)	dauA	C4‑dicarboxylic acid transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCAGAACGCGCGATGGCAGCTGTAGCGGTAATACCACCAAAGAACGGAGCGATAATATTCCCCAGTCCCTGTCCAACCAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGCGGAATACCGTTACCCTGAGAA  >  NC_000913/1259785‑1260072                                                                                                                                                     |                                                                                                                                            gCAGAACGCGCGATGGCAGCTGTAGCGGTAATGCCACCAAAGAACGGAGCGATAATATTCCCCAGTCCCTGTCCACCCTGTTAGCTGTTCGCCTGGTGTTTCGTCCCGGTCATACCATACAGCGCCACGGCGCAGAGTAGAGATTCGAt                                                                                                                                             >  1:173019/1‑149 (MQ=255)         cgcgATGGCAGCTGTAGCGGTAATACCACCAAAGAACGGAGCGATAATATTCCCCAGTCCCTGTCCAACCAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGTAGAGATTCGATTGCGcc                                                                                                                                       <  4:46650/147‑1 (MQ=255)         cgcgATGGCAGCTGTAGCGGTAATACCACCAAAGAACGGAGCGATAATATTCCCCAGTCCCTGTCCAACCAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGTAGAGATTCGATTGCGcc                                                                                                                                       >  3:46650/1‑147 (MQ=255)                           ggTAATACCACCAATGAACGGAGCGATATTATTCCCCAGTCCCTGTCCAACGAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCTTCCAGCACAACGGCGCAGAGTAGAGATTCGATTGGGCCGAGCATTGCCATTGAGAATg                                                                                                                   <  2:173019/149‑1 (MQ=255)                                   caccaAAGAACGGAGCGATAATATTCCCCAGTCCCTGTCCAACCAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCAtt                                                                                                                          <  7:131991/134‑1 (MQ=255)                                   caccaAAGAACGGAGCGATAATATTCCCCAGTCCCTGTCCAACCAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCAtt                                                                                                                          >  8:131991/1‑134 (MQ=255)                                        aaGAACGGAGCGATAATATTCCCCAGTCCCTGTCCAACCAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGcagcag                                                                                                      >  4:2064/1‑149 (MQ=255)                                                  cGATAATATTCCCCAGTCCCTGTCCAACCAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATa                                                                                            <  2:52385/149‑1 (MQ=255)                                                    ataataTTCCCCAGTCCCTGTCCAACCAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCTTCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAg                                                                                           >  5:103448/1‑148 (MQ=255)                                                             cccAGTCCCTGTCCAACCAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCTTCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAgg                                                                                  <  6:103448/148‑1 (MQ=255)                                                                             ccAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCgca                                                                                                              >  6:28321/1‑104 (MQ=255)                                                                             ccAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCgca                                                                                                              <  5:28321/104‑1 (MQ=255)                                                                             ccAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGgcagca                                                                                                       <  8:137038/111‑1 (MQ=255)                                                                             ccAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGgcagca                                                                                                       >  7:137038/1‑111 (MQ=255)                                                                                 ttCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAg                                                             >  1:91334/1‑149 (MQ=255)                                                                                            ccTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGc                                                                             <  8:123152/122‑1 (MQ=255)                                                                                            ccTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCAc                                                  >  4:72489/1‑149 (MQ=255)                                                                                            ccTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGGTAGc                                                                             >  7:123152/1‑122 (MQ=255)                                                                                                  gtTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCgcaggc                                                                                                           <  8:33555/86‑1 (MQ=255)                                                                                                   tttCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGgcagca                                           >  7:40483/1‑149 (MQ=255)                                                                                                            ggTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCg                                  >  8:18616/1‑149 (MQ=255)                                                                                                              tCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCgcagg                                                                                                            <  2:73221/73‑1 (MQ=255)                                                                                                              tCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCgcagg                                                                                                            >  1:73221/1‑73 (MQ=255)                                                                                                                aTACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGgca                               <  2:91334/148‑1 (MQ=255)                                                                                                                   ccATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGgcagca                            <  8:40483/148‑1 (MQ=255)                                                                                                                    cATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCgca                                                                                                              <  6:46051/65‑1 (MQ=255)                                                                                                                      tCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGACATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTg                        >  8:125272/1‑149 (MQ=255)                                                                                                                       ccAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGc                       >  4:86700/1‑149 (MQ=255)                                                                                                                        cAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCAGTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGc                       <  3:2064/148‑1 (MQ=255)                                                                                                                          gCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGACTCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGCgg                     >  7:109180/1‑148 (MQ=255)                                                                                                                          gCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGt                                      <  4:119430/131‑1 (MQ=255)                                                                                                                          gCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGt                                      >  3:119430/1‑131 (MQ=255)                                                                                                                              cacGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGgcagc                             >  8:73807/1‑136 (MQ=255)                                                                                                                              cacGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGgcagc                             <  7:73807/136‑1 (MQ=255)                                                                                                                               acGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGCGGAATAcc               <  3:86700/149‑1 (MQ=255)                                                                                                                               acGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGCGGAATAcc               >  2:1876/1‑149 (MQ=255)                                                                                                                                       gagcagagATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGCGGAATACCGTTACCCt       <  8:109180/149‑1 (MQ=255)                                                                                                                                        agcagagATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGCGGAATACCGTTACCCt       >  2:105084/1‑148 (MQ=255)                                                                                                                                          cagagATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCAc                                          <  2:139006/111‑1 (MQ=255)                                                                                                                                          cagagATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCAc                                          >  1:139006/1‑111 (MQ=255)                                                                                                                                          cagagATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGCGGAATACCGTTACCCTgag    <  7:18616/149‑1 (MQ=255)                                                                                                                                           agcgaTTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGCGGAATACCGTTACCCTgag    >  7:28280/4‑148 (MQ=255)                                                                                                                                            gagaTTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGCGGAATACCGTTACCCTGAGaa  <  1:105084/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                            GCAGAACGCGCGATGGCAGCTGTAGCGGTAATACCACCAAAGAACGGAGCGATAATATTCCCCAGTCCCTGTCCAACCAGTTCGCTGTTCGCCTTGTGTTTCGTCCCGGTCATACCATCCAGCACCACGGCGCAGAGCAGAGATTCGATTGCGCCGAGCATTGCCATTGAGAATGCCGCAGGCAGCAGTGTGCGAATAGAATCCCAGGTTAGCGTGAATTCTGAATTAGGCAGATCCCACGGCAGCACCAGTTGCGGCAGCAGTTGCGGAATACCGTTACCCTGAGAA  >  NC_000913/1259785‑1260072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.