New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3342725 =	106 (1.340)	4 (0.050)	4/250	NT	3.8%	coding (453/567 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
	?	NC_000913	3342747 =	101 (1.330)					coding (475/567 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
Rejected: Frequency below/above cutoff threshold.

CAGTGATAGCACAATGATAACCCAACGTCTGGCTTTACTCATATCGATTGCCCTTTGGCTTCATCCAGTTTGCCCTGCGCCAGGAGTAATAAGTCGCAAACTTCGCGCACTGCGCCACGACCGCCAGCAATGCGCGTCACGTAATCGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3342877‑3342725 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGTGAT  >  NC_000913/3342747‑3342891                                                                                                                                                                                                                                                                                                            CAGTGATAGCACAATGATAACCCAACGTCTGGCTTTACTCATATCGATTGCCCTTTGGCTTCATCCAGTTTGCCCTGCGCCAGGAGTAATAAGTCGCAAACTTCGCGCACTGCGCCACGACCGCCAGCAATGCGCGTCACGTAATCGGC                                                                                                                                                       >  5:14617/1‑149                                                                                                                                 AATGCGCGTCACGTAATCGGCGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAA                                                                           >  5:149922/1‑97                                                                                                                                 AATGCGCGTCACGTAATCGGCGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAA                                                                           <  6:149922/97‑1                                                                                                                                    GCGCGTCACGTAATCGGCGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTAT                                                                                                        <  3:343114/65‑1                                                                                                                                    GCGCGTCACGTAATCGGCGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTAT                                                                                                        >  4:343114/1‑65                                                                                                                                                      GCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGTGAT  <  4:5423/149‑1                                                                                                                                                                                                                                                                                                            CAGTGATAGCACAATGATAACCCAACGTCTGGCTTTACTCATATCGATTGCCCTTTGGCTTCATCCAGTTTGCCCTGCGCCAGGAGTAATAAGTCGCAAACTTCGCGCACTGCGCCACGACCGCCAGCAATGCGCGTCACGTAATCGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3342877‑3342725 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGTGAT  >  NC_000913/3342747‑3342891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.