New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3342725 =106 (1.340)4 (0.050) 4/250 NT 3.8% coding (453/567 nt) kdsC 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
?NC_000913 3342747 = 101 (1.330)coding (475/567 nt) kdsC 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 116 total aligned reads displayed.

GGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGTGAT  >  NC_000913/3342602‑3342891
                                                                                                                                                 |                                                                                                                                                
ggAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTg                                                                                                                                               >  2:227586/1‑149 (MQ=255)
   aataCTGGCGAGTGCCCCGGAAAATGTGGCTTATGTCGGCGAGGAGCTCATCGACGGGCCGGTAATGGAAAAAGTGGGTTTCAGCGTCGCCGGGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTCCGTGACGCGCATTGCTg                                                                                                                                            <  5:74997/146‑1 (MQ=255)
    aaaCTGGCGATTGCCCCCGTAAATGTGGGCTATGTCCGCGATGATCGCATCGTCTGGCCGGGAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTgg                                                                                                                                           <  8:311565/149‑1 (MQ=255)
     aaCTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCCACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCCTGTCCGAAGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGc                                                                                                                                          >  6:282131/1‑149 (MQ=255)
      aCTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCg                                                                                                                                         <  4:186274/149‑1 (MQ=255)
            gATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCggg                                                                                                                                   <  2:95903/149‑3 (MQ=255)
            gATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTg                                                                                                                                   <  5:292452/149‑1 (MQ=255)
             aTTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTgg                                                                                                                                  >  2:281739/1‑149 (MQ=255)
                 ccccGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCa                                                                                                                              <  6:18653/149‑1 (MQ=255)
                  cccGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTTACGCGCCTTGATGGCGGTCGTGGAGCAg                                                                                                                             >  8:254724/1‑149 (MQ=255)
                  cccGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAg                                                                                                                             >  1:89292/1‑149 (MQ=255)
                   ccGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGt                                                                                                                            >  7:366215/1‑149 (MQ=255)
                   ccGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGt                                                                                                                            >  3:179140/1‑149 (MQ=255)
                   ccGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGt                                                                                                                            <  4:164714/149‑1 (MQ=255)
                   ccGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGt                                                                                                                            >  8:191492/1‑149 (MQ=255)
                      gAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTgcg                                                                                                                         >  3:148891/1‑149 (MQ=255)
                             tgGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGGGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGt                                                                                                                   <  3:257817/148‑1 (MQ=255)
                               gCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGGCGTGGCGCAGTGCGCGAAGTTTg                                                                                                                <  2:296067/149‑1 (MQ=255)
                                cTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGc                                                                                                               <  3:34200/149‑1 (MQ=255)
                                cTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGc                                                                                                               <  2:343658/149‑1 (MQ=255)
                                 ttATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGc                                                                                                               >  1:368749/1‑148 (MQ=255)
                                 ttATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCg                                                                                                              >  2:170521/1‑149 (MQ=255)
                                 ttATGTCGGAGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTCATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGc                                                                                                               >  8:276822/1‑148 (MQ=255)
                                  tATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGa                                                                                                             <  1:221982/149‑1 (MQ=255)
                                   aTGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCg                                                                                                              <  4:157962/147‑1 (MQ=255)
                                    tGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGCTGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACt                                                                                                           >  5:16832/1‑149 (MQ=255)
                                      tCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCg                                                                                                              <  4:74000/144‑1 (MQ=255)
                                      tCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCg                                                                                                              >  3:74000/1‑144 (MQ=255)
                                       cGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttat                                                                                                        <  2:89292/149‑1 (MQ=255)
                                         gCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttatta                                                                                                      <  4:149789/149‑1 (MQ=255)
                                         gCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttatta                                                                                                      <  1:281739/149‑1 (MQ=255)
                                           gatgatCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttatta                                                                                                      >  2:3860/1‑147 (MQ=255)
                                           gatgatCTCATCGACTGGCAGGTAATGGAAAAAGTTGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACt                                                                                                    <  2:367163/149‑1 (MQ=255)
                                                tctcATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTgg                                                                                               >  7:213217/1‑149 (MQ=255)
                                                  tcATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGgcg                                                                                             >  6:332204/1‑149 (MQ=255)
                                                   ttcatccagtttgccctgcgccaggagtaataagtcgcaaacttcgcgcactgcgccacgaccgccagcaatGCGCGCCGATTACGTGACGCGCAtt                                                                                                                                                >  5:149922‑M1/73‑97 (MQ=255)
                                                   ttcatccagtttgccctgcgccaggagtaataagtcgcaaacttcgcgcactgcgccacgaccgccagcaatGCGCGCCGATTACGTGACGCGCAtt                                                                                                                                                <  6:149922‑M1/25‑1 (MQ=255)
                                                    aTCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTc                                                                                                   <  3:304119/141‑1 (MQ=255)
                                                    aTCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTc                                                                                                   >  4:304119/1‑141 (MQ=255)
                                                    aTCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCCGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTgg                                                                                               <  1:227586/145‑1 (MQ=255)
                                                       gACTGGCCTGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAgg                                                                                         <  8:296736/148‑1 (MQ=255)
                                                       gACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAgg                                                                                         <  8:133729/148‑1 (MQ=255)
                                                       gACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGGCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAgg                                                                                         <  6:338072/148‑1 (MQ=255)
                                                       gACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGGCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAgg                                                                                         <  4:97455/148‑1 (MQ=255)
                                                         cTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGGGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCa                                                                                      <  5:332204/149‑1 (MQ=255)
                                                            gCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGTCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAAc                                                                                   >  6:324168/1‑149 (MQ=255)
                                                            gCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAAc                                                                                   >  7:171607/1‑149 (MQ=255)
                                                               ggTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTgg                                                                                <  6:314084/149‑1 (MQ=255)
                                                                gTAATGGAAAAAGTGGGTTTAAGCGTCGTCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGa                                                                               <  5:324168/149‑1 (MQ=255)
                                                                gTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGa                                                                               >  5:90020/1‑149 (MQ=255)
                                                                 tAATGGAAAAAGTGTGTTTTAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGGCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGAt                                                                              <  6:231123/149‑1 (MQ=255)
                                                                 tAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGAt                                                                              >  6:349085/1‑149 (MQ=255)
                                                                    tGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGCTCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATg                                                                             >  5:325537/1‑147 (MQ=255)
                                                                     ggAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAg                                                                          >  6:14617/1‑149 (MQ=255)
                                                                      gAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAg                                                                          <  1:170521/148‑1 (MQ=255)
                                                                      gAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGc                                                                         <  6:306851/149‑1 (MQ=255)
                                                                           aGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAg                                                                    <  5:23894/149‑1 (MQ=255)
                                                                                 tttAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAAt                                                              <  2:88569/149‑1 (MQ=255)
                                                                                   tAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATc                                                             <  1:239825/148‑1 (MQ=255)
                                                                                     aGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGat                                                          <  5:122477/149‑1 (MQ=255)
                                                                                       cGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGatat                                                        <  3:342075/149‑1 (MQ=255)
                                                                                        gTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGatat                                                        >  4:289841/1‑148 (MQ=255)
                                                                                         tCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGa                                                      <  3:184373/149‑1 (MQ=255)
                                                                                            ccGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGt                                                    >  2:294664/1‑148 (MQ=255)
                                                                                            ccGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTa                                                   <  3:289841/149‑1 (MQ=255)
                                                                                                 gCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGcc                                              <  8:171607/149‑1 (MQ=255)
                                                                                                 gCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATAACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGcc                                              <  1:362309/149‑1 (MQ=255)
                                                                                                   cGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGa                                                      >  6:296323/1‑139 (MQ=255)
                                                                                                         gcATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTg                                      >  1:278417/1‑149 (MQ=255)
                                                                                                         gcATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTg                                      <  8:274523/149‑1 (MQ=255)
                                                                                                            tCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttatta                                                                                                      <  5:264581/82‑1 (MQ=255)
                                                                                                            tCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttatta                                                                                                      >  6:264581/1‑82 (MQ=255)
                                                                                                            tCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCt                                                                                                 >  1:127059/1‑87 (MQ=255)
                                                                                                            tCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCt                                                                                                 <  2:127059/87‑1 (MQ=255)
                                                                                                             ccACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTgg                                                                                <  1:315723/103‑1 (MQ=255)
                                                                                                             ccACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTgg                                                                                >  2:315723/1‑103 (MQ=255)
                                                                                                              cACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTa                                 <  7:191492/149‑1 (MQ=255)
                                                                                                              cACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTa                                 >  5:288173/1‑149 (MQ=255)
                                                                                                               aCTGTTGATCCCGCGCTCAGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGAGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGAGATGAGTAAAGCCAGACGTTGGGTTa                                 >  2:212051/1‑148 (MQ=255)
                                                                                                               aCTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTAt                                >  3:331982/1‑149 (MQ=255)
                                                                                                                 tGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCa                              >  5:158700/1‑149 (MQ=255)
                                                                                                                       tCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTgg                                     >  1:331694/1‑136 (MQ=255)
                                                                                                                       tCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTgg                                     <  2:331694/136‑1 (MQ=255)
                                                                                                                        aatgcgcgtcacgtaatcggcgcgcATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGaa                                                                           <  6:149922‑M2/72‑1 (MQ=255)
                                                                                                                         ccGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCt                       <  6:16832/148‑1 (MQ=255)
                                                                                                                         ccGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTa                      >  8:180927/1‑149 (MQ=255)
                                                                                                                           gcgcgtcacgtaatcggcgcgcATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttat                                                                                                        <  3:343114‑M2/43‑1 (MQ=255)
                                                                                                                           gcgcgtcacgtaatcggcgcgcATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttat                                                                                                        >  4:343114‑M2/23‑65 (MQ=255)
                                                                                                                               GCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTg                >  5:14617‑M1/1‑149 (MQ=255)
                                                                                                                                ccGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTgg               <  3:76274/149‑1 (MQ=255)
                                                                                                                                ccGATTACGTGACGCGCATTGCTGGCGGTCGTGACGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTgg               <  8:22013/149‑1 (MQ=255)
                                                                                                                                 cGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGc              >  3:141281/1‑149 (MQ=255)
                                                                                                                                 cGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGc              >  1:303693/1‑149 (MQ=255)
                                                                                                                                 cGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGc              >  1:305070/1‑149 (MQ=255)
                                                                                                                                        gTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCg             >  6:320683/1‑143 (MQ=255)
                                                                                                                                        gTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCg             <  5:320683/143‑1 (MQ=255)
                                                                                                                                        gTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTg       >  3:5423/1‑149 (MQ=255)
                                                                                                                                          gACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTTCTCCTGGCGCATGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTggg     <  7:254724/149‑2 (MQ=255)
                                                                                                                                           aCGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGt     <  2:278417/148‑1 (MQ=255)
                                                                                                                                             gcgcATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGtgat  <  4:5423‑M2/145‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
GGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGTGAT  >  NC_000913/3342602‑3342891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.