BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	294856 =	152 (1.680)	4 (0.050)	4/238	NT	2.7%	intergenic (‑57/+283)	yagM/yagN	CP4‑6 prophage; uncharacterized protein/CP4‑6 prophage; uncharacterized protein
*	?	NC_000913	294883 =	142 (1.690)	4 (0.050)	4/238	NT	2.7%	intergenic (‑84/+256)	yagM/yagN	CP4‑6 prophage; uncharacterized protein/CP4‑6 prophage; uncharacterized protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 180 total aligned reads displayed.

TGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGTTTTGG  >  NC_000913/294708‑295004

tGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgt                                                                                                                                                       >  4:335671/1‑149 (MQ=255)

 caaattgcctgaggggctacctcgcccaaaacaaatcaatggccgccattactggttacgtaaagatgtcctcgattttatagatacattttctgtacgagaaagtctgtaataaattacagatttaattttattgatttatagcgaTg                                                                                                                                                      <  4:294283‑M1/2‑1 (MQ=255)

  tactacCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgtgt                                                                                                                                                     <  4:35130/149‑1 (MQ=255)

  tactacCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgtg                                                                                                                                                      <  3:136951/148‑1 (MQ=255)

  tactacCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAgtg                                                                                                                                                      <  7:401770/148‑1 (MQ=255)

    attgcctgaggggctacctcgcccaaaacaaatcaatggccgccattactggttacgtaaagatgtcctcgattttatagatacattttctgtacgagaaagtctgtaataaattacagatttaattttattgatttatagcgaTGTTg                                                                                                                                                   <  1:262676‑M1/5‑1 (MQ=255)

     tttcctgaggggctacctcgcccaaaacaaatcaatggccgccattactggttacgtaaagatgtcctcgattttatagatacattttctgtacgagaaagtctgtaataaattacagatttaattttattgatttatagcgaTGTTGc                                                                                                                                                  >  6:248338‑M1/144‑149 (MQ=255)

     ttgcctgaggggctacctcgcccaaaacaaatcaatggccgccattactggttacgtaaagatgtcctcgattttatagatacattttctgtacgagaaagtctgtaataaattacagatttaattttattgatttatagcgaTGTTGc                                                                                                                                                  <  3:335671‑M1/6‑1 (MQ=255)

       ccTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGcca                                                                                                                                                >  5:368038/1‑148 (MQ=255)

        cTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGccc                                                                                                                                                >  7:46108/1‑148 (MQ=255)

                 aTTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTtctc                                                                                                                                     >  1:198092/1‑149 (MQ=255)

                 aTTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTtctc                                                                                                                                     >  8:267776/1‑149 (MQ=255)

                  ttGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCg                                                                                                                                    >  2:238725/1‑149 (MQ=255)

                    tttttttCCTTGACATGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCgg                                                                                                                                   <  2:93927/147‑1 (MQ=255)

                     tttttGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCggg                                                                                                                                  <  1:238725/148‑1 (MQ=255)

                       tttGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGc                                                                                                                                >  1:114756/1‑148 (MQ=255)

                          gCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAAc                                                                                                                             <  7:381975/148‑1 (MQ=255)

                           ccTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACAt                                                                                                                           >  7:336498/1‑149 (MQ=255)

                                 cAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCtat                                                                                                                     <  7:399515/149‑1 (MQ=255)

                                 cAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCta                                                                                                                      >  6:189343/1‑148 (MQ=255)

                                 cAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTCTTCTCGGGGCAACATCGCta                                                                                                                      >  8:317149/1‑148 (MQ=255)

                                  aaGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCtat                                                                                                                     >  4:62054/1‑148 (MQ=255)

                                   aGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCtata                                                                                                                    >  2:205921/1‑148 (MQ=255)

                                   aGGTTTTTTTCCTGGTAGAACGCTGCTAATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCtata                                                                                                                    >  5:190966/1‑148 (MQ=255)

                                    tcaatggccgccattactggttacgtaaagatgtcctcgattttatagatacattttctgtacgagaaagtctgtaataaattacagatttaattttattgatttatagcgaTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATaaa                                                                                                                  >  6:406864‑M1/113‑149 (MQ=255)

                                    ggTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAATACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATaaa                                                                                                                  <  4:43827/149‑1 (MQ=255)

                                    ggTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCg                                                                                                                         <  2:196612/142‑1 (MQ=255)

                                     gTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATaaa                                                                                                                  >  6:386797/1‑148 (MQ=255)

                                              cTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATaaaa                                                                                                         <  5:386797/148‑1 (MQ=255)

                                              cTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAAt                                                                                                        >  6:121192/1‑149 (MQ=255)

                                               tGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTTCTATCTGAAATTTCTCAGTGTTGACCC‑ATTATTCTCGGGGCTACATGGCTATAAAGAAATAAAAt                                                                                                        >  6:215654/1‑148 (MQ=255)

                                                 gTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaa                                                                                                     <  2:296975/149‑1 (MQ=255)

                                                 gTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaa                                                                                                     <  1:158263/149‑1 (MQ=255)

                                                 gTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaa                                                                                                     <  5:79681/149‑1 (MQ=255)

                                                 gTAGAACGCTGCTAATCTCAATATTAGTAAGACTATTAGACATTTTTAATGAAACCTCTTTGTTATATCAATATAAAACTACTATCTGACATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaa                                                                                                     <  2:296980/149‑1 (MQ=255)

                                                  tAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaaa                                                                                                    >  6:321788/1‑149 (MQ=255)

                                                          tgctCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATc                                                                                                                          <  4:364907/119‑1 (MQ=255)

                                                          tgctCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATATGATATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGTGAACAACGCTATAAATCAATAAAATTAAATCTGTAAt                                                                                            >  6:260243/1‑149 (MQ=255)

                                                            ctCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATGTGTAAtt                                                                                           <  2:114756/148‑1 (MQ=255)

                                                               aTCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATttatt                                                                                       <  2:332859/149‑1 (MQ=255)

                                                               aTCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATttat                                                                                        >  4:101039/1‑148 (MQ=255)

                                                               aTCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATttat                                                                                        >  3:69384/1‑148 (MQ=255)

                                                                  tcAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATttatta                                                                                      >  5:186689/1‑147 (MQ=255)

                                                                   cAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATttatta                                                                                      >  5:403323/1‑146 (MQ=255)

                                                                    aaaaTTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACa                                                                                    <  5:121192/147‑1 (MQ=255)

                                                                    aaaaTTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGa                                                                                  >  7:920/1‑149 (MQ=255)

                                                                    aaaaTTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGa                                                                                  <  6:403323/149‑1 (MQ=255)

                                                                     aaaTTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATAAATTACAGat                                                                                 >  1:401963/1‑148 (MQ=255)

                                                                        ttAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCtat                                                                                                                     >  1:278965/1‑110 (MQ=255)

                                                                        ttAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCtat                                                                                                                     <  2:278965/110‑1 (MQ=255)

                                                                          gattttatagatacattttctgtacgagaaagtctgtaataaattacagatttaattttattgatttatagcgaTGTTGCCCC‑GAGAAAAATGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTtct                                                                            <  7:215463‑M1/75‑1 (MQ=255)

                                                                          aGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTtc                                                                             <  2:401752/148‑1 (MQ=255)

                                                                           gTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTtctc                                                                           >  1:118208/1‑149 (MQ=255)

                                                                                 tagatacattttctgtacgagaaagtctgtaataaattccagatttaattttattgatttatagcgaTGTTGCCCCGAGAAAACT‑GGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAg                                                                     >  2:266560‑M1/68‑149 (MQ=255)

                                                                                      aGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGaaaa                                                                 <  8:113131/148‑1 (MQ=255)

                                                                                       gACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCtat                                                                                                                     <  8:222260/95‑1 (MQ=255)

                                                                                       gACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATg                                                               >  8:304320/1‑149 (MQ=255)

                                                                                        aCATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGt                                                              <  3:62054/149‑1 (MQ=255)

                                                                                        aCATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTAAAAATCAATAAAATTAAATCTGTATATTATTACAGACTTTCTCGTACAGAAAATg                                                               >  1:190300/1‑148 (MQ=255)

                                                                                         cATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTa                                                             <  3:101039/149‑1 (MQ=255)

                                                                                         cATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTa                                                             <  3:366895/149‑1 (MQ=255)

                                                                                          aTTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑AGTTTTCTCGGGGCAACATCGCTATAAATCATTTAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAAGGTAt                                                            >  4:240950/1‑149 (MQ=255)

                                                                                           tttttAAGGAACCCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTAGAAATCAATAAAATTatt                                                                                                    >  8:347319/1‑106 (MQ=255)

                                                                                             tttAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCta                                                         >  7:209749/1‑149 (MQ=255)

                                                                                                 aGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTGTCGTACAGAAAATGTATCTATaa                                                      <  5:321788/148‑1 (MQ=255)

                                                                                                  ggAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATaaaa                                                    >  4:139868/1‑149 (MQ=255)

                                                                                                   gAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCta                                                                                                                      <  7:141854/82‑1 (MQ=255)

                                                                                                   gAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCg                                                                          >  3:331033/1‑126 (MQ=255)

                                                                                                   gAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCg                                                                          <  4:331033/126‑1 (MQ=255)

                                                                                                      aCCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGa                                                <  7:100375/149‑1 (MQ=255)

                                                                                                      aCCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGa                                                <  4:266212/149‑1 (MQ=255)

                                                                                                       ccTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAg                                               <  7:304320/149‑1 (MQ=255)

                                                                                                           tttGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGa                                             <  5:67195/147‑1 (MQ=255)

                                                                                                              gTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCt                                        >  6:275642/1‑149 (MQ=255)

                                                                                                               ttATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCtt                                       <  6:368038/149‑1 (MQ=255)

                                                                                                               ttATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCt                                        <  7:223241/148‑1 (MQ=255)

                                                                                                                      aaTATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTAc                                    <  1:8327/145‑1 (MQ=255)

                                                                                                                      aaTATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTaa                                >  8:157834/1‑149 (MQ=255)

                                                                                                                       atatAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAAc                               <  7:292822/149‑1 (MQ=255)

                                                                                                                        tataAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATc                                         <  7:174547/138‑1 (MQ=255)

                                                                                                                        tataAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATc                                         >  8:174547/1‑138 (MQ=255)

                                                                                                                         ataAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCa                             >  4:174437/1‑149 (MQ=255)

                                                                                                                          taAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCa                             <  8:211711/148‑1 (MQ=255)

                                                                                                                            aaaCTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTa                          <  7:347128/149‑1 (MQ=255)

                                                                                                                             aaCTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTaa                         <  1:300582/149‑1 (MQ=255)

                                                                                                                                  ctaTCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATggc                     <  7:185293/148‑1 (MQ=255)

                                                                                                                                    aTCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATg                       >  8:342461/1‑144 (MQ=255)

                                                                                                                                     tCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATggcggc                  >  2:262676/1‑148 (MQ=255)

                                                                                                                                        gAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAAt                                                                                                        <  4:283520/59‑1 (MQ=255)

                                                                                                                                        gAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGAGTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCAtt              >  6:81811/1‑149 (MQ=255)

                                                                                                                                        gAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCAtt              >  1:44641/1‑149 (MQ=255)

                                                                                                                                         aaaTTTCTCAGTGTTGCCCC‑ATTTTTCTCTGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTATCCAGTAATGGCCGCCagt              >  2:60394/1‑146 (MQ=255)

                                                                                                                                          aaTTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGa            >  5:180454/1‑149 (MQ=255)

                                                                                                                                            tttCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGAtt          <  3:174437/149‑1 (MQ=255)

                                                                                                                                                tcAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCCTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGtt      <  5:260243/149‑1 (MQ=255)

                                                                                                                                                  aGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGa            >  3:285805/1‑141 (MQ=255)

                                                                                                                                                  aGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGtttt    <  6:10246/149‑1 (MQ=255)

                                                                                                                                                  aGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGtttt    <  1:380438/149‑1 (MQ=255)

                                                                                                                                                  aGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGttt     <  8:61937/148‑1 (MQ=255)

                                                                                                                                                    TGTTGCCAC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGATAATGTATCTATAAAATGGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGTTTTgg  >  3:355944‑M1/1‑149 (MQ=255)

TGTACTACCTGTGACTCATTGTTTTTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCC‑ATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGTTTTGG  >  NC_000913/294708‑295004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.