New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1941819 =	30 (1.000)	8 (0.290)	8/206	1.9	23.2%	coding (765/933 nt)	znuA	zinc ABC transporter periplasmic binding protein
	?	NC_000913	1941845 =	25 (0.900)					coding (739/933 nt)	znuA	zinc ABC transporter periplasmic binding protein

TGTTTTACCCAGTTTGATATTCGTCCCCAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATAG  >  NC_000913/1941714‑1941951                                                                                                                                     |                                                                                                           tatttcgaaaaacagtttggactgacaccgcttggtcattttaccgttaaccctgagattcaacctggcgcgcatcgtttacatgaaataagaacacagttggttgagcaaaaacgcaggttgctttttgctCAACCAACTgtgt                                                                                                >  1:111646‑M2/133‑145 (MQ=255) tatttcgaaaaacagtttggactgacaccgcttggtcattttaccgttaaccctgagattcaacctggcgcgcagcgtttacatgaaataagaacacagttggttgagcaaaaacgcaggttgctttttgctCAACCAACTgtgt                                                                                                <  2:111646‑M2/13‑1 (MQ=255)                gATATTCGTCCCCAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCt                                                                            >  2:147247/1‑149 (MQ=255)                 atatTCGTCCCCAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTg                                                                           <  1:147247/149‑1 (MQ=255)                                   tCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCGCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAAtctc                                                         <  3:131376/149‑1 (MQ=255)                                                        gATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCa                                                        >  7:38966/1‑129 (MQ=255)                                                        gATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCa                                                        <  8:38966/129‑1 (MQ=255)                                                            tCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCAt                                                                                     <  8:27331/96‑1 (MQ=255)                                                            tCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCAt                                                                                     >  7:27331/1‑96 (MQ=255)                                                              ccTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAACCGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGc                                <  3:99192/147‑1 (MQ=255)                                                              ccTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCa                                                                                      <  3:24061/93‑1 (MQ=255)                                                              ccTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCa                                                                                      >  4:24061/1‑93 (MQ=255)                                                              ccTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGc                                >  4:99192/1‑147 (MQ=255)                                                               cctggcgcgcagcgtttacatgaaataagaacacagttggttgAGCAAAAACGCAGGTTGC‑TTTTTGCTcaa                                                                                                          >  5:141143‑M1/44‑72 (MQ=255)                                                               cctggcgcgcagcgtttacatgaaataagaacacagttggttgAGCAAAAACGCAGGTTGC‑TTTTTGCTcaa                                                                                                          <  6:141143‑M1/29‑1 (MQ=255)                                                                tCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATg                                                                                    >  6:64397/1‑93 (MQ=255)                                                                tCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATg                                                                                    <  5:64397/93‑1 (MQ=255)                                                                      gACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTCGCTCAACCAACTGTGTTCTTATTTCATGTaa                                                                                 <  8:106219/90‑1 (MQ=255)                                                                      gACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTCGCTCAACCAACTGTGTTCTTATTTCATGTaa                                                                                 >  7:106219/1‑90 (MQ=255)                                                                           tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCa                                                        >  5:169518/1‑110 (MQ=255)                                                                           tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCa                                                        <  6:169518/110‑1 (MQ=255)                                                                           tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAAt                                        >  3:37480/1‑126 (MQ=255)                                                                           tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAAt                                        <  4:37480/126‑1 (MQ=255)                                                                           tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGAcc                                    <  8:50636/130‑1 (MQ=255)                                                                           tctcAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGAcc                                    >  7:50636/1‑130 (MQ=255)                                                                                        tGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCaa                                  <  4:94211/119‑1 (MQ=255)                                                                                        tGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCaa                                  >  3:94211/1‑119 (MQ=255)                                                                                             acacagttggttgAGCAAAAA‑GCAACCTGCGTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATa   <  2:111646‑M1/132‑1 (MQ=255)                                                                                             acacagttggttgAGCAAAAA‑GCAACCTGCGTTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGATGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATa   >  1:111646‑M1/14‑145 (MQ=255)                                                                                                        ttgagcaaaaagcaacctgcgtttttgctCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAgg                                                                  <  6:141143‑M2/43‑1 (MQ=255)                                                                                                        ttgagcaaaaagcaacctgcgtttttgctCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAgg                                                                  >  5:141143‑M2/30‑72 (MQ=255)                                                                                                            gcaaaaagcaacctgcgtttttgctCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTaa                                                 <  3:3991‑M2/60‑1 (MQ=255)                                                                                                            gcaaaaagcaacctgcgtttttgctCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTaa                                                 >  4:3991‑M2/26‑85 (MQ=255)                                                                                                                aaagcaacctgcgtttttgctCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAgg                                                      <  7:85574‑M2/55‑1 (MQ=255)                                                                                                                aaagcaacctgcgtttttgctCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAgg                                                      >  8:85574‑M2/22‑76 (MQ=255)                                                                                                                       gTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATAg  <  7:43104/120‑1 (MQ=255)                                                                                                                       gTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATAg  >  8:43104/1‑120 (MQ=255)                                                                                                                             tttttgctCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTc         <  8:25069‑M2/100‑1 (MQ=255)                                                                                                                             tttttgctCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTc         >  7:25069‑M2/9‑108 (MQ=255)                                                                                                                                     |                                                                                                           TGTTTTACCCAGTTTGATATTCGTCCCCAGGGGATCCAACGTTCCCATACGAACGGATGTCCCTCGTGCGACGCTCTCAACGACCGCTGGCCTGAACTGTGGCTCAGCAAAAACGCAGGTTGC‑TTTTTGCTCAACCAACTGTGTTCTTATTTCATGTAAACGCTGCGCGCCAGGTTGAATCTCAGGGTTAACGGTAAAATGACCAAGCGGTGTCAGTCCAAACTGTTTTTCGAAATAG  >  NC_000913/1941714‑1941951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.