New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3229847	39 (1.130)	6 (0.180)	6/236	3.1	14.6%	coding (960/2352 nt)	ygjK	alpha‑glucosidase
	?	NC_000913	= 3229881	33 (1.000)					coding (994/2352 nt)	ygjK	alpha‑glucosidase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCGTTTTATCTCACCGCCTCGCAGCAACGCTGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGC  >  NC_000913/3229710‑3229975                                                                                                                                          |                                                                                                                                 gCGTTTTATCTCACCGCCTCGCAGCAACGCTGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGgc                                                                                                                               >  1:162493/1‑141 (MQ=255) gCGTTTTATCTCACCGCCTCGCAGCAACGCTGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGgc                                                                                                                               <  2:162493/141‑1 (MQ=255)                  cTCGCAGCAACGCTGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTa                                                                                                      <  1:130750/149‑1 (MQ=255)                               tGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGaaa                                                                                                                   <  8:115529/123‑1 (MQ=255)                               tGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGaaa                                                                                                                   >  7:115529/1‑123 (MQ=255)                               tGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGt                                                                                                        <  1:52489/134‑1 (MQ=255)                               tGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGt                                                                                                        >  2:52489/1‑134 (MQ=255)                               tGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTa                                                                                                      <  2:60675/136‑1 (MQ=255)                                  gaagaaTACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCgg                                                                                      <  2:137245/149‑1 (MQ=255)                                  gaagaaTACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCgg                                                                                      >  7:83326/1‑149 (MQ=255)                                     gaaTACCTGAAGAAAGGGTTAACCAATCCTGATGCTACGCCGGAACAGACGCGCGTCGAGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGt                                                                                                        >  1:99112/1‑128 (MQ=255)                                     gaaTACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCATGAACAGACGCGCGTCGCGGTTAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGt                                                                                                        <  2:99112/128‑1 (MQ=255)                                      aaTACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGgcgc                                                                                  <  8:83326/149‑1 (MQ=255)                                           cTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAcc                                                                                        >  1:82111/1‑138 (MQ=255)                                           cTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAcc                                                                                        <  2:82111/138‑1 (MQ=255)                                           cTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGtt                                                                             >  1:23485/1‑149 (MQ=255)                                             gaagaaAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTtct                                                                           >  5:109871/1‑149 (MQ=255)                                               agaaAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTcc                                                                         <  6:109871/149‑1 (MQ=255)                                                gaaAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCg                                                                        <  1:15755/149‑1 (MQ=255)                                                gaaAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCg                                                                        >  6:105289/1‑149 (MQ=255)                                                 aaaGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTaa                                                                                                              <  2:76787/110‑1 (MQ=255)                                                           ccAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGaaa                                                                                                                   >  2:191761/1‑95 (MQ=255)                                                           ccAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGAcc                                                             <  2:23485/149‑1 (MQ=255)                                                            cAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAcc                                                                                        >  8:51951/1‑121 (MQ=255)                                                            cAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAcc                                                                                        <  7:51951/121‑1 (MQ=255)                                                                                       gcgcgTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTg                                                     <  8:80835/129‑1 (MQ=255)                                                                                       gcgcgTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTg                                                     >  7:80835/1‑129 (MQ=255)                                                                                              gcgGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGAt                          <  5:105289/149‑1 (MQ=255)                                                                                                      aGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCt                                                            >  4:153611/1‑107 (MQ=255)                                                                                                      aGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCt                                                            <  3:153611/107‑1 (MQ=255)                                                                                                       gCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCAttt                 >  5:160030/1‑149 (MQ=255)                                                                                                         gATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGttt                               >  1:17358/1‑133 (MQ=255)                                                                                                         gATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGttt                               <  2:17358/133‑1 (MQ=255)                                                                                                          aTCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCaa              <  6:160030/149‑1 (MQ=255)                                                                                                          aTCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCaa              >  3:34795/1‑149 (MQ=255)                                                                                                                    tCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGGCATc    >  5:124356/1‑149 (MQ=255)                                                                                                                      aaCGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAc                                                                                         >  6:144764/1‑62 (MQ=255)                                                                                                                      aaCGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAc                                                                                         <  5:144764/62‑1 (MQ=255)                                                                                                                       aCGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGc  >  7:9820/1‑148 (MQ=255)                                                                                                                                          |                                                                                                                                 GCGTTTTATCTCACCGCCTCGCAGCAACGCTGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGC  >  NC_000913/3229710‑3229975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.