New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 322984739 (1.130)6 (0.180) 6/236 3.1 14.6% coding (960/2352 nt) ygjK alpha‑glucosidase
?NC_000913 = 3229881 33 (1.000)coding (994/2352 nt) ygjK alpha‑glucosidase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTTCTCCTGGCAGATCCAGCCTGGCGATAGCG  >  NC_000913/3229743‑3230028
                                                                                                                                          |                                                                                                                                                   
gaagaaTACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCgg                                                                                                                                           <  2:137245/149‑1 (MQ=255)
gaagaaTACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCgg                                                                                                                                           >  7:83326/1‑149 (MQ=255)
    aaTACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGgcgc                                                                                                                                       <  8:83326/149‑1 (MQ=255)
         cTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAcc                                                                                                                                             >  1:82111/1‑138 (MQ=255)
         cTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAcc                                                                                                                                             <  2:82111/138‑1 (MQ=255)
         cTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGtt                                                                                                                                  >  1:23485/1‑149 (MQ=255)
           gaagaaAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTtct                                                                                                                                >  5:109871/1‑149 (MQ=255)
             agaaAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTcc                                                                                                                              <  6:109871/149‑1 (MQ=255)
              gaaAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCg                                                                                                                             <  1:15755/149‑1 (MQ=255)
              gaaAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCg                                                                                                                             >  6:105289/1‑149 (MQ=255)
                         ccAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGAcc                                                                                                                  <  2:23485/149‑1 (MQ=255)
                          cAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAcc                                                                                                                                             >  8:51951/1‑121 (MQ=255)
                          cAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAcc                                                                                                                                             <  7:51951/121‑1 (MQ=255)
                                                     gcgcgTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTg                                                                                                          <  8:80835/129‑1 (MQ=255)
                                                     gcgcgTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTg                                                                                                          >  7:80835/1‑129 (MQ=255)
                                                            gcgGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGAt                                                                               <  5:105289/149‑1 (MQ=255)
                                                                    aGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCt                                                                                                                 >  4:153611/1‑107 (MQ=255)
                                                                    aGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCt                                                                                                                 <  3:153611/107‑1 (MQ=255)
                                                                     gCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCAttt                                                                      >  5:160030/1‑149 (MQ=255)
                                                                       gATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGttt                                                                                    >  1:17358/1‑133 (MQ=255)
                                                                       gATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGttt                                                                                    <  2:17358/133‑1 (MQ=255)
                                                                        aTCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCaa                                                                   <  6:160030/149‑1 (MQ=255)
                                                                        aTCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCaa                                                                   >  3:34795/1‑149 (MQ=255)
                                                                                  tCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGGCATc                                                         >  5:124356/1‑149 (MQ=255)
                                                                                    aaCGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAc                                                                                                                                              >  6:144764/1‑62 (MQ=255)
                                                                                    aaCGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGAc                                                                                                                                              <  5:144764/62‑1 (MQ=255)
                                                                                     aCGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGc                                                       >  7:9820/1‑148 (MQ=255)
                                                                                                               gcggtgAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCGGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTtctc                            <  4:34795/149‑1 (MQ=255)
                                                                                                                cggtgAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTtctc                            <  6:124356/148‑1 (MQ=255)
                                                                                                                           aaCACCGTTACACCGTCGGTGTCCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTTCTcc                           <  7:113954/138‑1 (MQ=255)
                                                                                                                           aaCACCGTTACACCGTCGGTGGCCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTTCTcc                           >  8:113954/1‑138 (MQ=255)
                                                                                                                                 gTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTTCTCCTGGCAGATCCAGCCTgg          <  8:9820/149‑1 (MQ=255)
                                                                                                                                         gTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTTCTCCTGGCAGATCCAGCCTGGCGATAgcg  >  5:65649/1‑149 (MQ=255)
                                                                                                                                          |                                                                                                                                                   
GAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTTCTCCTGGCAGATCCAGCCTGGCGATAGCG  >  NC_000913/3229743‑3230028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.