Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 75,953 IS2 (–) +5 bp coding (1343‑1347/1656 nt) sgrR ← transcriptional DNA‑binding transcriptional activator of sgrS sRNA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 75953 =2 (0.060)48 (1.320) 44/250 0.0 95.8% coding (1347/1656 nt) sgrR transcriptional DNA‑binding transcriptional activator of sgrS sRNA
?NC_000913 381260 = NA (NA)noncoding (1/1331 nt) IS2 repeat region
* ? NC_000913 = 759572 (0.060)45 (1.250) 39/248 0.1 95.6% coding (1343/1656 nt) sgrR transcriptional DNA‑binding transcriptional activator of sgrS sRNA
?NC_000913 = 382590 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

TCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCACCCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGC  >  NC_000913/75811‑76101
                                                                                                                                              |                                                                                                                                                    
ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTc                                                                                                                                                    >  5:95575‑M1/143‑145 (MQ=255)
ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTc                                                                                                                                                    >  5:153155‑M1/143‑145 (MQ=255)
ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTc                                                                                                                                                    >  8:5115‑M1/143‑145 (MQ=255)
tctcGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtg                                                                                                                                                >  7:94304‑M1/1‑147 (MQ=255)
      tgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCt                                                                                                                                          >  1:54211‑M1/137‑149 (MQ=255)
         tGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgccc                                                                                                                                       >  4:133045‑M1/1‑138 (MQ=255)
            gcCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgccccta                                                                                                                                    <  8:94304‑M1/149‑15 (MQ=255)
             cgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGc                                                                                                                                    >  1:132750‑M1/130‑148 (MQ=255)
                    gcagcGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttcca                                                                                                                            <  3:133045‑M1/149‑23 (MQ=255)
                    gcagcGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAt                                                                                                                                                 >  1:81896‑M1/1‑127 (MQ=255)
                    gcagcGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAt                                                                                                                                                 <  2:81896‑M1/128‑2 (MQ=255)
                        tttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGAtctctc                                                                                                                                            >  3:131500‑M1/119‑129 (MQ=255)
                        tttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGAtctctc                                                                                                                                            <  4:131500‑M1/11‑1 (MQ=255)
                                 ccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATctct                                                                                                               >  2:201957‑M1/110‑149 (MQ=255)
                                  ccAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatca                                                                                                              >  5:168931‑M1/1‑113 (MQ=255)
                                   ctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTTTATGCCACTGATCGTAGTCGATCTCttt                                                                                                             >  6:3701‑M1/108‑149 (MQ=255)
                                   ctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCg                                                                                                                           <  4:118573‑M1/28‑1 (MQ=255)
                                   ctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCg                                                                                                                           >  3:118573‑M1/108‑135 (MQ=255)
                                   cAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcac                                                                                                             >  5:9193‑M1/1‑112 (MQ=255)
                                    taatccatcaatcatctgtttaccaatgaatagtctaaaaactattattaagtctatcacttatttaagtgatattggttgtctggatcttcatggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGAt                                                                                                                   >  6:116323‑M1/107‑142 (MQ=255)
                                    taagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccattataTACGATATATCATTTATGCAAATGATCTTAGTCGAt                                                                                                                   <  5:116323‑M1/36‑1 (MQ=255)
                                          atcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGAtttt                                                                                                       <  1:191081‑M1/48‑1 (MQ=255)
                                             aatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCtt                                                                                                              <  8:10864‑M1/41‑1 (MQ=255)
                                             aatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCtt                                                                                                              >  7:10864‑M1/98‑138 (MQ=255)
                                              aaTGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccat                                                                                                    >  2:129261‑M1/1‑101 (MQ=255)
                                              aaTGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccat                                                                                                    <  1:129261‑M1/147‑47 (MQ=255)
                                                 atctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGa                                                                                                                                                  >  7:160448‑M1/94‑98 (MQ=255)
                                                 atctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGa                                                                                                                                                  <  8:160448‑M1/5‑1 (MQ=255)
                                                        ctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGt                                                                                         >  2:191081‑M1/87‑148 (MQ=255)
                                                         tccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGa                                                                                       <  3:114663‑M1/64‑1 (MQ=255)
                                                         gtAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct                                                                                        >  6:117863‑M1/1‑90 (MQ=255)
                                                         gtAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct                                                                                        <  5:117863‑M1/148‑59 (MQ=255)
                                                          tAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgc                                                                                      <  6:168931‑M1/149‑61 (MQ=255)
                                                            gCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttcca                                                                                                                            <  7:51825‑M1/109‑23 (MQ=255)
                                                            gCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttcca                                                                                                                            >  8:51825‑M1/1‑87 (MQ=255)
                                                                tGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagac                                                                                                                         >  3:8291‑M1/1‑83 (MQ=255)
                                                                tGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagac                                                                                                                         <  4:8291‑M1/108‑26 (MQ=255)
                                                                 ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGc                                                                                  <  1:95092‑M1/69‑1 (MQ=255)
                                                                  tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAg                                                                               <  6:13167‑M1/72‑1 (MQ=255)
                                                                  gCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagata                                                                              <  6:9193‑M1/149‑69 (MQ=255)
                                                                    aCTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaaccca                                                                                                     <  6:23483‑M1/124‑46 (MQ=255)
                                                                    aCTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaaccca                                                                                                     >  5:23483‑M1/1‑79 (MQ=255)
                                                                     cTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccct                                                                                                                                     <  7:106479‑M1/91‑14 (MQ=255)
                                                                     cTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccct                                                                                                                                     >  8:106479‑M1/1‑78 (MQ=255)
                                                                        cGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGTGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcactt                                                                                                           <  5:91611‑M1/114‑40 (MQ=255)
                                                                        cGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGAGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcactt                                                                                                           >  6:91611‑M1/1‑75 (MQ=255)
                                                                        aaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATctgc                                                                        <  8:25887‑M1/79‑1 (MQ=255)
                                                                          aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATctgctg                                                                      >  4:114663‑M1/69‑149 (MQ=255)
                                                                                 tattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTACTGAATGCCACTGATCGTAGTCGATCTCTTTGATTTACAGCGTGCCCTGGTGACTTGCCAGAATCTGCTGAAAGATc                                                               <  5:45178‑M1/88‑1 (MQ=255)
                                                                                  tgCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccatt                                                                                                   <  5:94004‑M1/112‑48 (MQ=255)
                                                                                  tgCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccatt                                                                                                   >  6:94004‑M1/1‑65 (MQ=255)
                                                                                   ttaagactttcacttatttaagtgattttggttgtctggagtttcagtgggccagtctaTTCGTTCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGTTTTTGAGCGTGACCTGGTGACTTGCCAGAATctgc                                                                        >  6:37974‑M1/60‑138 (MQ=255)
                                                                                   ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtataTTCGATCTCTCCTGTATGCCACTGAACCTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATctgc                                                                        <  5:37974‑M1/79‑1 (MQ=255)
                                                                                    cGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttcc                                                                                                                             >  7:123848‑M1/1‑63 (MQ=255)
                                                                                    cGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttcc                                                                                                                             <  8:123848‑M1/84‑22 (MQ=255)
                                                                                     gAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgca                                                                                  <  5:31244‑M1/126‑65 (MQ=255)
                                                                                     gAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgca                                                                                  >  6:31244‑M1/1‑62 (MQ=255)
                                                                                      agactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCgg                                                           >  2:95092‑M1/57‑148 (MQ=255)
                                                                                       gactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCgg                                                           <  2:180084‑M1/92‑1 (MQ=255)
                                                                                       gactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCgg                                                           >  1:180084‑M1/56‑147 (MQ=255)
                                                                                            tcacttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCa                                                     >  5:13167‑M1/51‑148 (MQ=255)
                                                                                               cttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCAccc                                                  <  2:124516‑M1/101‑1 (MQ=255)
                                                                                                ttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTATTCGATCTCTTAGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCaa                                                        <  8:84457‑M1/95‑1 (MQ=255)
                                                                                                ttatttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCaa                                                        >  7:84457‑M1/47‑141 (MQ=255)
                                                                                                   tttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATcc                                                              >  6:35460‑M1/44‑132 (MQ=255)
                                                                                                   tttaagtgatattggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATcc                                                              <  5:35460‑M1/89‑1 (MQ=255)
                                                                                                       agtgatattgggtgtctggagattgagggggccagtctaTTCGATCTCTCCTGTTTGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGGTGCATGATCCCGGCAATCACCCGATGCTCa                                          >  6:45178‑M1/40‑148 (MQ=255)
                                                                                                         tgatattggtagtctggagattcagggggccagtctaTTCTATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGAACTGGTGACTTGCCAGAATCTGCTGCATGAACACGGCAATCACACGATGCTCACtg                                       <  8:150798‑M1/112‑1 (MQ=255)
                                                                                                             attggttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCACCCGATGCTCACTGTGAt                                   <  5:179931‑M1/116‑1 (MQ=255)
                                                                                                                 gttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATctgct                                                                       <  1:201188‑M1/80‑1 (MQ=255)
                                                                                                                 gttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATctgct                                                                       >  2:201188‑M1/30‑109 (MQ=255)
                                                                                                                 gttgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCACCCGATGCTCACTGTGATCCt                                >  1:124516‑M1/30‑148 (MQ=255)
                                                                                                                   tgtctggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGGCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAAGCACCCGATGCTCACTGTGATCCTGAt                             >  7:150798‑M1/28‑149 (MQ=255)
                                                                                                                   gTTGGCGCTGTTTAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta                             >  6:21328‑M1/1‑32 (MQ=255)
                                                                                                                       tggagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCACCCGATGCTCACTGTGATCCTGATaaaa                         >  7:25887‑M1/24‑149 (MQ=255)
                                                                                                                         gagattcagggggccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCACCCGATGCTCACTGTGATCCTGATaaaa                         >  6:179931‑M1/22‑147 (MQ=255)
                                                                                                                             tttAGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc                     <  5:21328‑M1/147‑126 (MQ=255)
                                                                                                                                aGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta                             <  5:141704‑M1/136‑118 (MQ=255)
                                                                                                                                aGCCAGATATCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta                             >  6:141704‑M1/1‑19 (MQ=255)
                                                                                                                                    aGATATCACTTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGa                                                                                       >  4:90966/1‑74 (MQ=255)
                                                                                                                                    aGATATCACTTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGa                                                                                       <  3:90966/74‑1 (MQ=255)
                                                                                                                                     gccagtctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCACCCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGc           <  6:154236‑M1/140‑1 (MQ=255)
                                                                                                                                        atCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc                     >  2:107635‑M1/1‑11 (MQ=255)
                                                                                                                                        atCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc                     <  5:130709‑M1/136‑126 (MQ=255)
                                                                                                                                        atCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc                     >  6:130709‑M1/1‑11 (MQ=255)
                                                                                                                                        atCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc                     <  1:107635‑M1/136‑126 (MQ=255)
                                                                                                                                         tCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac                                                          >  5:179107‑M1/1‑10 (MQ=255)
                                                                                                                                         tCACTTTCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac                                                          <  6:179107‑M1/98‑89 (MQ=255)
                                                                                                                                          tctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCACCCGATGCTCACTGTGATCCTGa                              <  7:59290‑M1/121‑1 (MQ=255)
                                                                                                                                          tctaTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCACCCGATGCTCACTGTGATCCTGa                              >  8:59290‑M1/5‑125 (MQ=255)
                                                                                                                                             tttCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgca        <  5:50605‑M1/144‑139 (MQ=255)
                                                                                                                                             tttCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgca        >  6:50605‑M1/1‑6 (MQ=255)
                                                                                                                                             tttCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcg                                                               >  2:186349‑M1/1‑6 (MQ=255)
                                                                                                                                             tttCGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcg                                                               <  1:186349‑M1/89‑84 (MQ=255)
                                                                                                                                              ttCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCACCCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGc  >  5:96083/1‑149 (MQ=255)
                                                                                                                                              |                                                                                                                                                    
TCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACAGAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATTTTCAGCGTGACCTGGTGACTTGCCAGAATCTGCTGCATGATCCCGGCAATCACCCGATGCTCACTGTGATCCTGATAAAAGGTTAGGGTGAGGCTTTCCAGGC  >  NC_000913/75811‑76101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.