Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,806,309 IS5 (+) +4 bp intergenic (‑226/‑58) ydiY ← / → pfkB acid‑inducible putative outer membrane protein/6‑phosphofructokinase II

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1397238NA (NA)98 (0.970) 67/280 0.5 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 1806309 = 0 (0.000)intergenic (‑226/‑61) ydiY/pfkB acid‑inducible putative outer membrane protein/6‑phosphofructokinase II
* ? NC_000913 = 18063120 (0.000)94 (0.930) 74/280 0.3 100% intergenic (‑229/‑58) ydiY/pfkB acid‑inducible putative outer membrane protein/6‑phosphofructokinase II
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region

Only 100 of 189 total aligned reads displayed.

AAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAATTTCTTCACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTG  >  NC_000913/1806165‑1806458
                                                                                                                                                   |                                                                                                                                                  
actggggataacgcgttaaatggcgaagaaacggtataaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgatatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAt                                                                                                                                                   <  3:138369‑M2/5‑1 (MQ=255)
     ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATttctt                                                                                                                                              <  8:254778‑M2/10‑1 (MQ=255)
       ataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAatttcttta                                                                                                                                            >  3:165303‑M2/138‑147 (MQ=255)
       aCGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggt                                                                                                                                             <  1:436055‑M1/148‑8 (MQ=255)
        taacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAtttcttt                                                                                                                                             <  6:292501‑M2/11‑2 (MQ=255)
        taacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacattccTTAAtttcttt                                                                                                                                             >  5:292501‑M2/137‑146 (MQ=255)
           cgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACttt                                                                                                                                        >  4:195111‑M2/134‑149 (MQ=255)
           aTTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaa                                                                                                                                        >  6:242507‑M1/1‑137 (MQ=255)
                 aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccatccTTAATTTCTTTACTTTCCGc                                                                                                                                    <  8:223219‑M2/20‑1 (MQ=255)
                 aaaaGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagt                                                                                                                                   <  2:327027‑M1/148‑18 (MQ=255)
                  aaaGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtcc                                                                                                                                 <  3:322070‑M1/149‑20 (MQ=255)
                   atggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGAt                                                                                                                                >  6:409466‑M2/126‑149 (MQ=255)
                   aaGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTAATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccc                                                                                                                                <  3:65230‑M1/149‑21 (MQ=255)
                    tggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaggcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGAtt                                                                                                                               <  3:340361‑M2/25‑1 (MQ=255)
                      gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCg                                                                                                                             <  5:252914‑M2/27‑1 (MQ=255)
                        gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGt                                                                                                                           >  8:77442‑M2/121‑149 (MQ=255)
                          gAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatat                                                                                                                          >  7:295011‑M1/1‑122 (MQ=255)
                           gaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGcc                                                                                                                        <  8:246815‑M2/32‑1 (MQ=255)
                              aaCCTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgat                                                                                                                            <  1:217593‑M1/142‑25 (MQ=255)
                              aaCCTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgat                                                                                                                            >  2:217593‑M1/1‑118 (MQ=255)
                                 gtctaaataggctgattcaaggcatttactggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTg                                                                                                                  <  2:18727‑M2/38‑1 (MQ=255)
                                    gCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                                <  2:357884‑M1/148‑37 (MQ=255)
                                     cAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                              >  4:72300‑M1/1‑111 (MQ=255)
                                      aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTc                                                                                                                                       <  3:207857‑M2/17‑1 (MQ=255)
                                       ataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCa                                                                                                            <  3:195111‑M2/44‑1 (MQ=255)
                                        tGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                            >  4:240974‑M1/1‑108 (MQ=255)
                                        tGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                            >  6:130423‑M1/1‑108 (MQ=255)
                                          ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGcc                                                                                                         <  1:68242‑M2/47‑1 (MQ=255)
                                           aTTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                                                                        >  1:122447‑M1/1‑105 (MQ=255)
                                              cTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                                                                      <  5:41311‑M1/148‑47 (MQ=255)
                                              cTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaa                                                                                                                                        >  8:47093‑M1/1‑102 (MQ=255)
                                              cTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaa                                                                                                                                        <  7:47093‑M1/114‑13 (MQ=255)
                                               ttATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                                                                      >  8:334620‑M1/1‑101 (MQ=255)
                                               ttATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                                                                      >  2:313208‑M1/1‑101 (MQ=255)
                                                 aTTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc                                                                                                  >  8:28686‑M1/1‑99 (MQ=255)
                                                 aTTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                                                                   <  5:242507‑M1/148‑50 (MQ=255)
                                                 aTTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                                                                    <  2:420106‑M1/147‑49 (MQ=255)
                                                  tttCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaa                                                                                                                                     >  8:17006‑M1/1‑98 (MQ=255)
                                                  caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATagga                                                                                                  <  4:165303‑M2/54‑1 (MQ=255)
                                                   ttCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTaa                                                                                                                                                    <  6:312915/97‑1 (MQ=255)
                                                   ttCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTaa                                                                                                                                                    >  5:312915/1‑97 (MQ=255)
                                                   aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGaa                                                                                                                >  8:158676‑M2/94‑133 (MQ=255)
                                                   aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCtat                                                                                                      >  1:310203‑M2/94‑143 (MQ=255)
                                                   aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCtat                                                                                                      <  2:310203‑M2/50‑1 (MQ=255)
                                                    tCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                                >  3:353233‑M1/1‑96 (MQ=255)
                                                     cATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                                >  2:168641‑M1/1‑95 (MQ=255)
                                                       ttttttGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                              <  4:229068‑M1/131‑39 (MQ=255)
                                                       ttttttGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                              >  3:229068‑M1/1‑93 (MQ=255)
                                                        atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAatg                                                                                           >  2:251003‑M2/89‑149 (MQ=255)
                                                           ttGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                         <  5:100575‑M1/148‑60 (MQ=255)
                                                            tgtataaGCAAGGGGCGAAAACATATTTTTATTTATATAAAATTATCAGCAAAATTTTAAAAAAACGGCCAATAAATCATTTTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag                                                                                        <  5:152328‑M1/145‑61 (MQ=255)
                                                            tGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag                                                                                        <  2:122447‑M1/148‑61 (MQ=255)
                                                            acggtagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattagcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAatgatg                                                                                        <  1:118513‑M2/64‑1 (MQ=255)
                                                            acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAatgatg                                                                                        <  6:176005‑M2/64‑1 (MQ=255)
                                                              gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTa                                                                                     >  4:249742‑M2/83‑149 (MQ=255)
                                                              aaTAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggt                                                                                                                                             <  1:419152‑M1/93‑8 (MQ=255)
                                                               ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAatgatg                                                                                        >  2:398968‑M2/82‑145 (MQ=255)
                                                               ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAatgatg                                                                                        <  1:398968‑M2/64‑1 (MQ=255)
                                                                tAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                                    >  5:330554‑M1/1‑84 (MQ=255)
                                                                gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAtttcttt                                                                                                                                             >  3:200527‑M2/81‑90 (MQ=255)
                                                                       aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCtat                                                                            <  6:72955‑M2/76‑1 (MQ=255)
                                                                             aaaaCAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                       >  7:153229‑M1/1‑71 (MQ=255)
                                                                              tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGa                                                                     >  5:379705‑M2/67‑149 (MQ=255)
                                                                              tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGa                                                                     >  4:302294‑M2/67‑149 (MQ=255)
                                                                              aaaCAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                                                                      >  6:87420‑M1/1‑70 (MQ=255)
                                                                                  aGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact                                                                  >  4:32135‑M1/1‑66 (MQ=255)
                                                                                    aTTTTTATTTATATATATTTATCTGCTAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggcgccatagaacagg                                                                                       <  8:299970‑M1/125‑62 (MQ=255)
                                                                                    aTTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAACTCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac                                                               <  1:350130‑M1/149‑86 (MQ=255)
                                                                                         gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGc                                                                                                                                    <  8:188614‑M2/20‑1 (MQ=255)
                                                                                              atatatatTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                                      >  5:227118‑M1/1‑54 (MQ=255)
                                                                                                 tatatTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgtacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag                                                   <  7:51338‑M1/148‑98 (MQ=255)
                                                                                                 tatatTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                  <  3:240974‑M1/149‑99 (MQ=255)
                                                                                                  atatTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgatcaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                  >  8:209459‑M1/1‑50 (MQ=255)
                                                                                                  atatTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                  >  7:167795‑M1/1‑50 (MQ=255)
                                                                                                   tatTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtacctgatatgagatcatgtttgtcatctggagccatagaacagggttgatcatgagtcataaacttaccttcgccgacagtg                                                 >  6:183611‑M1/1‑49 (MQ=255)
                                                                                                    atTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                               >  2:48650‑M1/1‑48 (MQ=255)
                                                                                                    actgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATa                                                <  7:222705‑M2/104‑1 (MQ=255)
                                                                                                           tGCAAAATTTTAAATAAAGCTCCAATAATTCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                         <  6:37342‑M1/100‑60 (MQ=255)
                                                                                                             cAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag                                       >  6:191119‑M1/1‑39 (MQ=255)
                                                                                                             cAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                        <  7:6926‑M1/147‑109 (MQ=255)
                                                                                                             cAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag                                          <  8:167795‑M1/145‑107 (MQ=255)
                                                                                                              aaaaTTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt                                      >  3:105666‑M1/1‑38 (MQ=255)
                                                                                                               aaaTTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                                    <  3:72300‑M1/149‑113 (MQ=255)
                                                                                                                   tttAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc                                >  7:281105‑M1/1‑33 (MQ=255)
                                                                                                                     gaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGc                              <  8:111032‑M2/122‑1 (MQ=255)
                                                                                                                       aataaaGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                             <  7:334620‑M1/148‑120 (MQ=255)
                                                                                                                       aataaaGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa                                                                                           >  8:58076‑M1/1‑29 (MQ=255)
                                                                                                                               gcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATcc                    <  3:302294‑M2/132‑1 (MQ=255)
                                                                                                                                 cAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa                  <  4:202053‑M1/149‑131 (MQ=255)
                                                                                                                                 cAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa                   >  5:186150‑M1/1‑19 (MQ=255)
                                                                                                                                    tAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga               <  6:330554‑M1/149‑134 (MQ=255)
                                                                                                                                       gcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATagg                                                                                                   >  7:180930‑M2/10‑62 (MQ=255)
                                                                                                                                       gcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGaa                >  6:171460‑M2/10‑145 (MQ=255)
                                                                                                                                       gcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGaa                <  5:171460‑M2/136‑1 (MQ=255)
                                                                                                                                         accttccCTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAatgat                                                                                         >  4:10673‑M2/8‑70 (MQ=255)
                                                                                                                                          atatTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt         >  1:320379‑M1/1‑10 (MQ=255)
                                                                                                                                              ccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTgcg     >  8:63275‑M2/3‑149 (MQ=255)
                                                                                                                                               cTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTAGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTgcg     <  4:367197‑M2/147‑1 (MQ=255)
                                                                                                                                                ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt    <  1:156750‑M1/148‑145 (MQ=255)
                                                                                                                                                  aaTTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTg  <  1:181159/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
AAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAATTTCTTCACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTG  >  NC_000913/1806165‑1806458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.