Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,806,309 IS5 (+) +4 bp intergenic (‑226/‑58) ydiY ← / → pfkB acid‑inducible putative outer membrane protein/6‑phosphofructokinase II

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1397238NA (NA)98 (0.970) 67/280 0.5 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 1806309 = 0 (0.000)intergenic (‑226/‑61) ydiY/pfkB acid‑inducible putative outer membrane protein/6‑phosphofructokinase II
* ? NC_000913 = 18063120 (0.000)94 (0.930) 74/280 0.3 100% intergenic (‑229/‑58) ydiY/pfkB acid‑inducible putative outer membrane protein/6‑phosphofructokinase II
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region

Only 100 of 200 total aligned reads displayed.

CTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAATTTCTTCACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCT  >  NC_000913/1806161‑1806457
                                                                                                                                                    |                                                                                                                                                    
 aaaactggggataacgccttaaatggcgaagaaccggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct                                                                                                                                                      <  5:312363‑M2/1‑1 (MQ=255)
 aaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcctt                                                                                                                                                     <  4:50887‑M2/2‑1 (MQ=255)
   gAAAGGTAACGAATTATAAATAGGCGCGAATAACTTATCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGtt                                                                                                                                                     <  8:251266/147‑1 (MQ=255)
   aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTaa                                                                                                                                                   <  1:144533‑M2/4‑1 (MQ=255)
        gTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaag                                                                                                                                              <  6:275408‑M1/149‑6 (MQ=255)
         ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATttctt                                                                                                                                             <  8:254778‑M2/10‑1 (MQ=255)
         ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATttctt                                                                                                                                             <  5:165182‑M2/10‑1 (MQ=255)
           ataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAatttcttta                                                                                                                                           <  2:151666‑M2/12‑3 (MQ=255)
           aCGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggt                                                                                                                                            <  1:436055‑M1/148‑8 (MQ=255)
            taacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTAc                                                                                                                                          <  4:384761‑M2/13‑1 (MQ=255)
            taacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacattccTTAAtttcttt                                                                                                                                            >  5:292501‑M2/137‑146 (MQ=255)
               cgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACttt                                                                                                                                       <  3:141612‑M2/16‑1 (MQ=255)
               cgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACttt                                                                                                                                       >  4:195111‑M2/134‑149 (MQ=255)
                gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTc                                                                                                                                      >  5:176005‑M2/133‑149 (MQ=255)
                     aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccatccTTAATTTCTTTACTTTCCGc                                                                                                                                   <  8:223219‑M2/20‑1 (MQ=255)
                     aaaaGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagt                                                                                                                                  <  2:327027‑M1/148‑18 (MQ=255)
                      aaaGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtcc                                                                                                                                <  3:322070‑M1/149‑20 (MQ=255)
                       atggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGAt                                                                                                                               >  6:409466‑M2/126‑149 (MQ=255)
                        tggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaggcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGAtt                                                                                                                              <  3:340361‑M2/25‑1 (MQ=255)
                          gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCg                                                                                                                            <  5:252914‑M2/27‑1 (MQ=255)
                           cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct                                                                                                                                                      <  3:398338‑M2/1‑1 (MQ=255)
                            gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGt                                                                                                                          >  8:77442‑M2/121‑149 (MQ=255)
                                  aaCCTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgat                                                                                                                           <  1:217593‑M1/142‑25 (MQ=255)
                                        gCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                               <  2:357884‑M1/148‑37 (MQ=255)
                                         cAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaaaaagtccctgatatgagatcatgttt                                                                                                             >  4:98808‑M1/1‑111 (MQ=255)
                                            tGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                           >  6:130423‑M1/1‑108 (MQ=255)
                                            tGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                           >  4:240974‑M1/1‑108 (MQ=255)
                                              ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGcc                                                                                                        <  1:68242‑M2/47‑1 (MQ=255)
                                                ttCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                                                                      >  3:202053‑M1/1‑104 (MQ=255)
                                                ttCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                                                                       <  2:72001‑M1/148‑45 (MQ=255)
                                                  cTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                                                                     <  5:41311‑M1/148‑47 (MQ=255)
                                                  cTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaa                                                                                                                                       >  8:47093‑M1/1‑102 (MQ=255)
                                                   ttATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                                                                   <  5:130423‑M1/149‑49 (MQ=255)
                                                   ttATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                                                                     >  8:334620‑M1/1‑101 (MQ=255)
                                                     aTTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc                                                                                                 >  8:28686‑M1/1‑99 (MQ=255)
                                                     aTTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                                                                   <  2:420106‑M1/147‑49 (MQ=255)
                                                      tttCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaa                                                                                                                                    <  7:17006‑M1/113‑16 (MQ=255)
                                                      tttCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaa                                                                                                                                    >  8:17006‑M1/1‑98 (MQ=255)
                                                      caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATagga                                                                                                 <  4:165303‑M2/54‑1 (MQ=255)
                                                       ttCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTaa                                                                                                                                                   <  6:312915/97‑1 (MQ=255)
                                                       aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGaa                                                                                                               <  7:158676‑M2/40‑1 (MQ=255)
                                                       aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGaa                                                                                                               >  8:158676‑M2/94‑133 (MQ=255)
                                                       aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCtat                                                                                                     >  1:310203‑M2/94‑143 (MQ=255)
                                                       aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTGAATTTCTTTACTTTCCGCGGATGAGGTGCCAGACTGAAATCAGCCTATaggag                                                                                                >  2:118513‑M2/94‑148 (MQ=255)
                                                        tCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                               >  3:353233‑M1/1‑96 (MQ=255)
                                                        aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGc                                                                                                                                   <  1:376284‑M2/20‑1 (MQ=255)
                                                          gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGaaa                                                                                            >  7:111032‑M2/91‑149 (MQ=255)
                                                           ttttttGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                             <  4:229068‑M1/131‑39 (MQ=255)
                                                           ttttttGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                             >  3:229068‑M1/1‑93 (MQ=255)
                                                            atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAat                                                                                           >  1:339760‑M2/89‑148 (MQ=255)
                                                                acggtagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattagcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAatgatg                                                                                       <  1:118513‑M2/64‑1 (MQ=255)
                                                                acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAatgatg                                                                                       <  6:176005‑M2/64‑1 (MQ=255)
                                                                  gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTa                                                                                    >  4:249742‑M2/83‑149 (MQ=255)
                                                                   ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAatgatg                                                                                       >  2:398968‑M2/82‑145 (MQ=255)
                                                                    tAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                                   >  5:330554‑M1/1‑84 (MQ=255)
                                                                    gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAtttcttt                                                                                                                                            >  3:200527‑M2/81‑90 (MQ=255)
                                                                       gCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                               <  5:230476‑M1/149‑69 (MQ=255)
                                                                         aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaacaatttccccgcttattcgcaccttccTTAATTTCTTAACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCt                                                                             <  6:294806‑M2/74‑1 (MQ=255)
                                                                          aaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTAc                                                                                   >  7:253536‑M2/75‑142 (MQ=255)
                                                                           aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCtat                                                                           <  6:72955‑M2/76‑1 (MQ=255)
                                                                                  tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGa                                                                    >  5:379705‑M2/67‑149 (MQ=255)
                                                                                  tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGa                                                                    >  4:302294‑M2/67‑149 (MQ=255)
                                                                                    aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGa                                                                    <  3:190444‑M2/83‑1 (MQ=255)
                                                                                     aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGacac                                                                 >  2:257988‑M2/64‑149 (MQ=255)
                                                                                        aTTTTTATTTATATATATTTATCTGCTAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggcgccatagaacagg                                                                                      <  8:299970‑M1/125‑62 (MQ=255)
                                                                                             gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGc                                                                                                                                   <  8:188614‑M2/20‑1 (MQ=255)
                                                                                             gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGc                                                                                                                                   >  7:188614‑M2/56‑75 (MQ=255)
                                                                                              aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCct                                                        >  2:181159‑M2/55‑149 (MQ=255)
                                                                                                   tatatatTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca                                                                                 <  4:338263‑M1/119‑67 (MQ=255)
                                                                                                     tatatTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgtacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag                                                  <  7:51338‑M1/148‑98 (MQ=255)
                                                                                                     tatatTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                 <  3:240974‑M1/149‑99 (MQ=255)
                                                                                                      atatTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgatcaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                 >  8:209459‑M1/1‑50 (MQ=255)
                                                                                                        atTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                              >  2:48650‑M1/1‑48 (MQ=255)
                                                                                                        actgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAg                                              <  2:339760‑M2/105‑1 (MQ=255)
                                                                                                           tATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                            <  3:106545‑M1/148‑104 (MQ=255)
                                                                                                               tGCAAAATTTTAAATAAAGCTCCAATAATTCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                        <  6:37342‑M1/100‑60 (MQ=255)
                                                                                                                 cAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccattgaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag                                         <  1:168641‑M1/145‑107 (MQ=255)
                                                                                                                 cAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                       <  7:6926‑M1/147‑109 (MQ=255)
                                                                                                                 cAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag                                         <  8:167795‑M1/145‑107 (MQ=255)
                                                                                                                 cAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag                                         <  7:331979‑M1/145‑107 (MQ=255)
                                                                                                                   cgagaagaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTa                                   <  2:224351‑M2/116‑1 (MQ=255)
                                                                                                                   aaaTTTTAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                                   <  3:72300‑M1/149‑113 (MQ=255)
                                                                                                                        ttAAATAAAGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc                               <  5:191119‑M1/148‑117 (MQ=255)
                                                                                                                         gaatttccccgcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGc                             <  8:111032‑M2/122‑1 (MQ=255)
                                                                                                                           aataaaGCTCCAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa                                                                                          >  8:58076‑M1/1‑29 (MQ=255)
                                                                                                                                   gcttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATcc                   <  3:302294‑M2/132‑1 (MQ=255)
                                                                                                                                     ttattcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATccc                  >  2:313168‑M2/16‑148 (MQ=255)
                                                                                                                                     cAATAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa                 <  4:202053‑M1/149‑131 (MQ=255)
                                                                                                                                        ttcgcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGaa               <  1:402265‑M2/136‑1 (MQ=255)
                                                                                                                                        tAAATCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga              <  6:330554‑M1/149‑134 (MQ=255)
                                                                                                                                           gcaccttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGaa               >  6:171460‑M2/10‑145 (MQ=255)
                                                                                                                                           aTCATATTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagat           >  7:364749‑M1/1‑13 (MQ=255)
                                                                                                                                             accttccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGaaaa         <  5:276210‑M2/142‑1 (MQ=255)
                                                                                                                                             accttccCTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAatgat                                                                                        >  4:10673‑M2/8‑70 (MQ=255)
                                                                                                                                              atatTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt        >  1:320379‑M1/1‑10 (MQ=255)
                                                                                                                                              atatTGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt        <  6:186150‑M1/149‑140 (MQ=255)
                                                                                                                                                 ttGTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt     <  7:28686‑M1/149‑143 (MQ=255)
                                                                                                                                                  ccTTAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTgcg    >  8:63275‑M2/3‑149 (MQ=255)
                                                                                                                                                    ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc  <  6:227118‑M1/149‑146 (MQ=255)
                                                                                                                                                    ttAATTTCTTTACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCt  >  2:193563/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTATTTATATATATTTATCTGCAAAATTTTAAATAAAGCTCCAATAAATCATATTGTTAATTTCTTCACTTTCCGCTGATTCGGTGCCAGACTGAAATCAGCCTATAGGAGGAAATGATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCT  >  NC_000913/1806161‑1806457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.