Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 982,486 Δ4 bp coding (1440‑1443/1848 nt) ldtD → murein L,D‑transpeptidase

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 982486 982489 4 94 [0] [0] 94 ldtD murein L,D‑transpeptidase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 9824850 (0.000)90 (0.900) 73/278 0.3 100% coding (1439/1848 nt) ldtD murein L,D‑transpeptidase
?NC_000913 982490 = 0 (0.000)coding (1444/1848 nt) ldtD murein L,D‑transpeptidase

AAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAAGCGATTGACCCATGGCAGGTTGACTGGTCTACAATCACGGCCTCGAATTTACCGTTCCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGCTGTGTACGAG  >  NC_000913/982346‑982637
                                                                                                                                                |                                                                                                                                                   
acgcaaagatattctgccaaaagtgcgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCtt                                                                                                                                                 >  4:206062‑M2/145‑149 (MQ=255)
acgcaaagatattctgccaaaagtgcgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactgggctacaatcacggcctcgattttaccCGCtt                                                                                                                                                 <  8:381798‑M2/5‑1 (MQ=255)
    aaagatattctgccaaaagtgcgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaccagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccAGCTTCcag                                                                                                                                             >  5:310186‑M2/141‑149 (MQ=255)
     aagatattctgccaaaagtgcgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCcagc                                                                                                                                            <  2:349105‑M2/10‑1 (MQ=255)
                ccaaaagtgcgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAg                                                                                                                                   <  3:173313‑M2/19‑1 (MQ=255)
                  aaaagtgcgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCCGGccc                                                                                                                               >  3:395560‑M2/127‑149 (MQ=255)
                  aaaagtgcgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGccc                                                                                                                               >  5:261075‑M2/127‑149 (MQ=255)
                     agtgcgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACg                                                                                                                            <  3:206062‑M2/26‑1 (MQ=255)
                       tgcgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGTCCCACgg                                                                                                                           >  6:411145‑M2/122‑148 (MQ=255)
                        gcgcaacgagccgggatatctcgacagccatggctatacggggctgcgcggctggaaccgcagagaagcgattgccccatggcagggggactgggctacaatcacgccctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGaa                                                                                                                         <  4:32913‑M2/29‑1 (MQ=255)
                           caacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTc                                                                                                                      >  1:391510‑M2/118‑149 (MQ=255)
                            aacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgcctggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCg                                                                                                                     >  6:384686‑M2/117‑149 (MQ=255)
                              cgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCt                                                                                                                   <  5:231433‑M2/35‑1 (MQ=255)
                                     ggatatctcgaaagtcatggctatacggagatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCTCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGgcgc                                                                                                            <  8:239361‑M2/42‑1 (MQ=255)
                                        tatctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacacatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCtat                                                                                                         <  2:365924‑M2/45‑1 (MQ=255)
                                           ctcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATaaa                                                                                                      >  7:205027‑M2/102‑149 (MQ=255)
                                            tcgaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAAt                                                                                                     >  7:284389‑M2/101‑149 (MQ=255)
                                              gaaagccatggctatacggtgatgcgcggctgtaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAAt                                                                                                     <  1:188611‑M2/49‑1 (MQ=255)
                                              gaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTc                                                                                                   <  7:11569‑M2/51‑1 (MQ=255)
                                              gaaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactgggctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATaaa                                                                                                      <  5:346642‑M2/48‑1 (MQ=255)
                                               aaagccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTc                                                                                                   >  7:297686‑M2/98‑148 (MQ=255)
                                                   ccatggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAatat                                                                                              <  5:116821‑M2/56‑1 (MQ=255)
                                                     atggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGc                                                                                            >  4:96793‑M2/92‑149 (MQ=255)
                                                      tggctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGcc                                                                                           <  8:205027‑M2/59‑1 (MQ=255)
                                                        gctatacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGTAACTCGCTGGGGCTCTATAAATTCAATATGCCg                                                                                          <  2:199769‑M2/60‑1 (MQ=255)
                                                            tacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGt                                                                                       <  8:270512‑M2/63‑1 (MQ=255)
                                                            tacggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGt                                                                                       <  8:277045‑M2/63‑1 (MQ=255)
                                                               ggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCaga                                                                                  <  7:131856‑M2/68‑1 (MQ=255)
                                                               ggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCaga                                                                                  <  7:128125‑M2/68‑1 (MQ=255)
                                                               ggtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccAGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCaga                                                                                  <  6:261075‑M2/68‑1 (MQ=255)
                                                                gtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCagag                                                                                 <  5:76782‑M2/69‑1 (MQ=255)
                                                                gtgatgcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCagag                                                                                 <  2:309986‑M2/69‑1 (MQ=255)
                                                                     gcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTc                                                                                                   <  7:30986‑M2/51‑1 (MQ=255)
                                                                     gcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTc                                                                                                   >  4:108480‑M2/76‑126 (MQ=255)
                                                                     gcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTc                                                                                                   <  3:108480‑M2/51‑1 (MQ=255)
                                                                     gcgcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTc                                                                                                   >  8:30986‑M2/76‑126 (MQ=255)
                                                                       gcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGaa                                                                                                                         >  3:349543‑M2/74‑102 (MQ=255)
                                                                       gcggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGaa                                                                                                                         <  4:349543‑M2/29‑1 (MQ=255)
                                                                       gcggctggaacagcagagaagcgattgacccatcgcaggttgactggtctacaatcacggactcgaatttaccCGCTTCCACCAGGCACCATGCCCACGGAACTCGCTGGGGCGCTATAAATTCAAAATGCCGAGTGCAGAGGCCattt                                                                          <  5:411145‑M2/76‑1 (MQ=255)
                                                                         ggctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCatttat                                                                        >  2:113325‑M2/72‑149 (MQ=255)
                                                                           ctggaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCatttattt                                                                      <  1:113325‑M2/80‑1 (MQ=255)
                                                                              gaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAat                                                                                                <  1:275289‑M2/54‑1 (MQ=255)
                                                                              gaacagcagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAat                                                                                                >  2:275289‑M2/67‑120 (MQ=255)
                                                                                    cagagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGacac                                                             >  1:377226‑M2/61‑149 (MQ=255)
                                                                                     agagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACg                                                            <  8:284389‑M2/90‑1 (MQ=255)
                                                                                      gagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCg                                                                                          >  7:421773‑M2/59‑118 (MQ=255)
                                                                                      gagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCg                                                                                          <  8:421773‑M2/60‑1 (MQ=255)
                                                                                      gagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGa                                                                <  6:50317‑M2/86‑1 (MQ=255)
                                                                                      gagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGa                                                                >  5:50317‑M2/59‑144 (MQ=255)
                                                                                      gagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGc                                                           <  6:166556‑M2/91‑1 (MQ=255)
                                                                                       agaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATg                                                                                             >  4:337204‑M2/58‑114 (MQ=255)
                                                                                       agaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATg                                                                                             <  3:337204‑M2/57‑1 (MQ=255)
                                                                                       agaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGcc                                                          >  5:24477‑M2/58‑149 (MQ=255)
                                                                                         aagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCg                                                         >  4:263123‑M2/56‑148 (MQ=255)
                                                                                             gattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACca                                                    <  2:377226‑M2/98‑1 (MQ=255)
                                                                                              attgacccatggcaggtttactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGc                                                                    <  3:381447‑M2/82‑1 (MQ=255)
                                                                                              attgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGc                                                                    >  4:381447‑M2/51‑132 (MQ=255)
                                                                                               ttgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAAc                                                      <  7:371825‑M2/96‑1 (MQ=255)
                                                                                               ttgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAAc                                                      >  8:371825‑M2/50‑145 (MQ=255)
                                                                                               ttgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATAACACGCCGAAc                                                      >  2:80196‑M2/50‑145 (MQ=255)
                                                                                               ttgacccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATAACACGCCGAAc                                                      <  1:80196‑M2/96‑1 (MQ=255)
                                                                                                  acccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATc                                               >  1:200704‑M2/47‑149 (MQ=255)
                                                                                                  acccatgccatgtttactggtctacaatcacggcctcgaatttaccCGCTTCAATCAGTCTACAGGCACACTGAACTCGCTGGGGCGCTATAAATTCAATATGACTAGTTCAGAGGACATTTATTTGCATGACACGCCGAACCACAAt                                                <  6:310186‑M2/102‑1 (MQ=255)
                                                                                                   cccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCaa                                                                                                 <  2:133443‑M2/53‑1 (MQ=255)
                                                                                                   cccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCaa                                                                                                 >  1:133443‑M2/46‑98 (MQ=255)
                                                                                                    ccatggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTg                                             >  2:328765‑M2/45‑149 (MQ=255)
                                                                                                       tggcaggttgactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCGGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTc                                          <  2:343662‑M2/108‑1 (MQ=255)
                                                                                                                gactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCATGCCCACGGAACTCGCTGGGGCGCTATAAATTCTATATGCCTAGTTCAGAGGCCATTTATTTTCATGACACGCCGAACCACAATCTGTTCAAGCGTGa                                  <  1:396139‑M2/116‑1 (MQ=255)
                                                                                                                gactggtctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGa                                  >  3:232203‑M2/33‑148 (MQ=255)
                                                                                                                      tctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACAcgc                           >  6:169801‑M2/27‑149 (MQ=255)
                                                                                                                      tctacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACAcgc                           <  3:96793‑M2/123‑1 (MQ=255)
                                                                                                                        tacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCt                                              >  7:92536‑M2/25‑128 (MQ=255)
                                                                                                                        tacaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCt                                              <  8:92536‑M2/104‑1 (MQ=255)
                                                                                                                         acaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAg                                       <  5:233590‑M2/111‑1 (MQ=255)
                                                                                                                         acaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCa                        >  4:18250‑M2/24‑149 (MQ=255)
                                                                                                                         acaatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAAGCTGTTCAAg                                       >  6:233590‑M2/24‑134 (MQ=255)
                                                                                                                          caatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGCGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCAt                       >  5:344341‑M2/23‑149 (MQ=255)
                                                                                                                          caatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCa                        <  1:328765‑M2/126‑1 (MQ=255)
                                                                                                                           aatcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCAtt                      >  1:208303‑M2/22‑149 (MQ=255)
                                                                                                                             tcacggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGa                    <  5:384686‑M2/130‑1 (MQ=255)
                                                                                                                                cggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCa                                         <  6:385547‑M2/109‑1 (MQ=255)
                                                                                                                                cggcctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCa                                         >  5:385547‑M2/17‑125 (MQ=255)
                                                                                                                                   cctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAg              >  5:43671‑M2/14‑149 (MQ=255)
                                                                                                                                   cctcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAg              >  2:64385‑M2/14‑149 (MQ=255)
                                                                                                                                     tcgaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGc            >  5:205825‑M2/12‑149 (MQ=255)
                                                                                                                                       gaatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGCtg          <  6:43671‑M2/140‑1 (MQ=255)
                                                                                                                                        aatttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGCtgt         >  4:117949‑M2/9‑149 (MQ=255)
                                                                                                                                         atttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGCCACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGCtgtg        >  1:205308‑M2/8‑149 (MQ=255)
                                                                                                                                         atttaccCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGCtgtg        >  2:189920‑M2/8‑149 (MQ=255)
                                                                                                                                             accCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGCTGTGTAc     <  3:18250‑M2/145‑1 (MQ=255)
                                                                                                                                               cCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCACGCGTGATac                               >  6:341031‑M2/2‑120 (MQ=255)
                                                                                                                                               cCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATac                               <  5:341031‑M2/119‑1 (MQ=255)
                                                                                                                                               cCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGCTGTGTACGAg  >  3:36285‑M2/2‑149 (MQ=255)
                                                                                                                                               cCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGCTGTGTACGAg  >  6:6520‑M2/2‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                   
AAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAAGCGATTGACCCATGGCAGGTTGACTGGTCTACAATCACGGCCTCGAATTTACCGTTCCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGCTGTGTACGAG  >  NC_000913/982346‑982637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: