Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,042,085	IS2 (+) +5 bp	coding (2122‑2126/2181 nt)	etk ←	tyrosine‑protein kinase, role in O‑antigen capsule formation

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	381260 =	NA (NA)	91 (0.910)	73/280	0.3	90.7%	noncoding (1/1331 nt)	IS2	repeat region
	?	NC_000913	= 1042089	9 (0.090)					coding (2122/2181 nt)	etk	tyrosine‑protein kinase, role in O‑antigen capsule formation
*	?	NC_000913	1042085 =	9 (0.090)	63 (0.630)	49/280	1.5	87.1%	coding (2126/2181 nt)	etk	tyrosine‑protein kinase, role in O‑antigen capsule formation
	?	NC_000913	= 1651548	NA (NA)					noncoding (706/706 nt)	IS2	repeat region

TCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/381405‑381260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGCCTCAGAGCATTC  <  NC_000913/1042089‑1041943                                                                                                                                                                                                                                                                                                       TCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGC                                                                                                                                                  >  3:69147/1‑149   TTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATATGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCAC                                                                                                                                                >  2:28950/1‑149     TTCCTTTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGAAATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAA                                                                                                                                                    <  6:239111/143‑1     TTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCA                                                                                                                                                 <  1:127154/146‑1     TTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAA                                                                                                                                                    <  3:381485/143‑1     TTCCTGTGTGGTACGCCGTCTGCGGTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGACTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAG                                                                                                                                                   <  4:320948/144‑1      TCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGC                                                                                                                                             >  4:273418/1‑149           TGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACA                                                                                                                                        <  7:308043/149‑1               GTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGT                                                                                                                                      >  7:305062/1‑147                    CCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGC                                                                                                                                >  6:185230/1‑148                     CGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTA                                                                                                                              >  2:70949/1‑149                     CGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACG                                                                                                                                  <  3:293428/145‑1                     CGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACG                                                                                                                                  >  4:293428/1‑145                      GTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTA                                                                                                                              >  2:286377/1‑148                           CGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAAC                                                                                                                          <  2:421119/147‑1                           CGTTACTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAAC                                                                                                                          <  8:33574/147‑1                                 TCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGG                                                                                                                  <  3:87117/149‑1                                 TCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGG                                                                                                                  >  2:349992/1‑149                                   CGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTT                                                                                                                <  7:152343/149‑1                                   CGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACG                                                                                                                   <  1:106009/146‑1                                           AGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTA                                                                                                                                          <  6:873/115‑1                                              CATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCC                                                                                                     <  6:98811/149‑1                                               ATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCC                                                                                                     >  8:394878/1‑148                                               ATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTC                                                                                                      >  2:396824/1‑147                                               ATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTC                                                                                                      <  1:396824/147‑1                                                  AATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCCGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGC                                                                                                                                >  8:382774/1‑118                                                    TCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAA                                                                                               <  7:382349/149‑1                                                    TCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTAATTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAAATATTACGGTTATAGTTACTCCGAGA                                                                                                 >  4:308701/1‑147                                                          GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTA                                                                                          >  8:305259/1‑148                                                           TTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGT                                                                                           <  1:418896/146‑1                                                            TCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAA                                                                                       <  8:305062/149‑1                                                              TCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACT                                                                                     >  3:174079/1‑149                                                              TCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTAT                                                                                                              <  7:425736/124‑1                                                              TCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTAT                                                                                                              >  8:425736/1‑124                                                                CAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTG                                                                                    >  5:292066/1‑148                                                                     ACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTG                                                                              <  4:370499/149‑1                                                                         GTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCC                                                                           <  6:292066/148‑1                                                                          TCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACT                                                                                                                         >  7:26305/1‑101                                                                          TCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACT                                                                                                                         <  8:26305/101‑1                                                                            TAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGAT                                                                       >  4:396832/1‑149                                                                            TAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGA                                                                                             >  8:32755/1‑127                                                                            TAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGA                                                                                             <  7:32755/127‑1                                                                            TAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTA                                                                                                                     >  4:219714/1‑103                                                                            TAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTA                                                                                                                     <  3:219714/103‑1                                                                             AAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTATGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGAAAAACTGAAAGTGGCCGGATG                                                                      >  2:125245/1‑149                                                                                 ACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGC                                                                  >  1:369703/1‑149                                                                                  CTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAA                                                                                       >  5:365771/1‑127                                                                                  CTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAA                                                                                       <  6:365771/127‑1                                                                                   TAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGT                                                                >  3:241482/1‑149                                                                                       ATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGA                                                                                             >  5:386447/1‑116                                                                                       ATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGA                                                                                             <  6:386447/116‑1                                                                                          AAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGC                                                          <  3:396832/148‑1                                                                                           AGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACG                                                                                                                                  >  7:407960/1‑75                                                                                           AGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACG                                                                                                                                  <  8:407960/75‑1                                                                                                 TCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCC                                                   <  2:414432/148‑1                                                                                                 TCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGGCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCG                                                  <  5:385989/149‑1                                                                                                   ACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGT                                                <  7:305259/149‑1                                                                                                     TTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTC                                               >  4:252567/1‑148                                                                                                       ATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTA                                             <  3:252567/148‑1                                                                                                           AAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCAT                                        >  2:214385/1‑149                                                                                                            AGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCAT                                        >  7:435724/1‑148                                                                                                             GTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTA                                      <  3:273418/149‑1                                                                                                             GTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCAT                                        >  1:94011/1‑147                                                                                                                ATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGATATAACTATTACGGTTATAGTTACTCAGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCATTTTCAGGTCTAAGCATTAGA                                    >  4:224121/1‑148                                                                                                                 TATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACA                                  <  8:128684/149‑1                                                                                                                  ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACTGTTATAGTTACTTCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAG                                 >  6:402819/1‑149                                                                                                                  ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGCCAG                                 >  2:64078/1‑149                                                                                                                      GTTGTCTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCT                             >  6:142929/1‑149                                                                                                                           CTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTT                               <  6:82083/142‑1                                                                                                                           CTGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTT                               >  5:82083/1‑142                                                                                                                            TGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTCCGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGC                                                                  <  5:392709/106‑1                                                                                                                            TGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTT                       >  6:110638/1‑149                                                                                                                            TGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTT                       >  7:214319/1‑149                                                                                                                            TGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGC                                                                  <  6:59604/106‑1                                                                                                                            TGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGC                                                                  >  6:392709/1‑106                                                                                                                            TGGAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGC                                                                  >  5:59604/1‑106                                                                                                                             GGAGATTTAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTG                      >  7:155751/1‑149                                                                                                                              GAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTT                       <  8:109397/147‑1                                                                                                                              GAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTT                        <  4:241482/146‑1                                                                                                                              GAGATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTT                        <  4:69147/146‑1                                                                                                                                GATTCAGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCAGAGAAAGAGTATAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCTTTTGTC                    <  3:224121/148‑1                                                                                                                                     AGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGGAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGC              <  1:349992/149‑1                                                                                                                                     AGGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGC              <  4:174079/149‑1                                                                                                                                      GGGGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGCC             <  1:70949/149‑1                                                                                                                                        GGGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTTCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGCCTC           <  5:402819/149‑1                                                                                                                                         GGCCAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGCCT            >  7:112680/1‑147                                                                                                                                            CAGTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGCCTCAGAG       <  5:142929/149‑1                                                                                                                                              GTCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGCCTCAGAGCA     <  8:356081/149‑1                                                                                                                                               TCTAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGCCTCAGAGCAT    >  5:170247/1‑149                                                                                                                                                 TAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGCCTCAGAGCATTC  <  1:28950/149‑1                                                                                                                                                 TAAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGCCTCAGAGCATT   >  1:139379/1‑148                                                                                                                                                                                                                                                                                                       TCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/381405‑381260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAAAACTGAAAGTGGCCGGATGCGGCGTGAACGCCTTTTCCGGTCTACGCATTAGACAGTTCTTCGTTTGTCATCAGCCTCAGAGCATTC  <  NC_000913/1042089‑1041943

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.