| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,042,085 | IS2 (+) +5 bp | coding (2122‑2126/2181 nt) | etk ← | tyrosine‑protein kinase, role in O‑antigen capsule formation |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 381260 = | NA (NA) | 91 (0.910) | 73/280 | 0.3 | 90.7% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 1042089 | 9 (0.090) | coding (2122/2181 nt) | etk | tyrosine‑protein kinase, role in O‑antigen capsule formation | |||||
| * | ? | NC_000913 | 1042085 = | 9 (0.090) | 63 (0.630) | 49/280 | 1.5 | 87.1% | coding (2126/2181 nt) | etk | tyrosine‑protein kinase, role in O‑antigen capsule formation |
| ? | NC_000913 | = 1651548 | NA (NA) | noncoding (706/706 nt) | IS2 | repeat region | |||||
Only 100 of 160 total aligned reads displayed.
CTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGCCAACAGAACGCCCCACGA > NC_000913/1041941‑1042235 | cTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCt > 8:177741/1‑149 (MQ=255) gAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTta < 1:28950‑M2/149‑3 (MQ=255) aaTGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTta > 1:139379‑M2/1‑146 (MQ=255) cttgcagaggcgttcgagcattataacgaatggcttccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGgcg < 6:281650‑M1/9‑1 (MQ=255) aTGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtaga > 5:170247‑M2/1‑145 (MQ=255) tGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagac < 8:356081‑M2/149‑6 (MQ=255) ctctGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactg < 5:142929‑M2/149‑8 (MQ=255) agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGttt > 4:136030‑M1/136‑149 (MQ=255) aGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggcc > 7:112680‑M2/1‑137 (MQ=255) ggCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccc < 1:70949‑M2/149‑14 (MQ=255) gcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAAt < 7:245361‑M1/17‑1 (MQ=255) gCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTCCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccct < 1:349992‑M2/149‑15 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCa < 7:84726‑M1/24‑1 (MQ=255) gaCAAAAGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTATACTCTTTCTCTGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatc < 3:224121‑M2/148‑20 (MQ=255) attataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGa > 7:373687‑M1/122‑149 (MQ=255) aaaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctcca > 6:110638‑M2/1‑126 (MQ=255) aaaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctcca > 7:214319‑M2/1‑126 (MQ=255) aaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctc < 4:69147‑M2/146‑22 (MQ=255) aaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctc < 4:241482‑M2/146‑22 (MQ=255) aaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAg > 8:76594/1‑149 (MQ=255) ataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGa < 3:357720‑M1/31‑1 (MQ=255) aacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGa < 1:382692‑M1/31‑1 (MQ=255) aaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccag < 6:82083‑M2/142‑25 (MQ=255) aaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccag > 5:82083‑M2/1‑118 (MQ=255) cTGGCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaat > 2:64078‑M2/1‑116 (MQ=255) aTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcactt > 2:214385‑M2/1‑109 (MQ=255) aTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTa < 2:367143/146‑1 (MQ=255) tAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaat < 3:252567‑M2/148‑45 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACgc < 8:125399‑M1/52‑1 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACgc < 7:440586‑M1/52‑1 (MQ=255) tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACgcc < 4:210340‑M1/53‑1 (MQ=255) cGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagcctggccccctgaatctccagacaaccaatatcacttaaataagtga < 5:385989‑M2/149‑51 (MQ=255) ggAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtga < 2:414432‑M2/148‑51 (MQ=255) gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACgcctgc > 2:356238‑M1/94‑149 (MQ=255) tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAatat < 6:415095‑M1/46‑1 (MQ=255) tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAatat > 5:415095‑M1/92‑137 (MQ=255) ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGTGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTc > 2:102162‑M1/88‑149 (MQ=255) gCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt < 3:396832‑M2/148‑58 (MQ=255) gcgctcgccacgggaatatcttcgtcagcgggcttgtaatgggttaactgatagcagatgtctggaaatataggggcaactccaGTGCTGGCGCGTTTAATCACACCCTTGACTATAGCGCCTTTAATATTGACGCCTGCCTGTTCCa > 1:209323‑M1/85‑148 (MQ=255) gccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctcca > 6:392709‑M2/1‑83 (MQ=255) gccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGGAACTGTAAGCGGTGCTtagactggccccctgaatctcca < 5:392709‑M2/106‑24 (MQ=255) gccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTg < 1:301080‑M1/71‑1 (MQ=255) cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGAGCCTTTAATATTGACGCCTGCATGTTCCAGACgcagca < 5:279445‑M1/73‑1 (MQ=255) cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCAtt > 3:248517‑M1/75‑149 (MQ=255) cATCCGGCCACTTTCAGTTTTTCTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCATAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt > 2:125245‑M2/1‑79 (MQ=255) aTCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta > 4:396832‑M2/1‑78 (MQ=255) ggCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac < 6:292066‑M2/148‑75 (MQ=255) cACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt < 4:370499‑M2/149‑79 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGTTAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACt < 4:342166‑M1/83‑1 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTc < 6:238713‑M1/84‑1 (MQ=255) tgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCa < 4:350457‑M1/85‑1 (MQ=255) cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCAc > 8:245361‑M1/63‑148 (MQ=255) gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACctc < 5:177271‑M1/89‑1 (MQ=255) cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACctct > 2:301080‑M1/60‑149 (MQ=255) aGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga > 3:174079‑M2/1‑64 (MQ=255) ttttACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga < 8:305062‑M2/149‑88 (MQ=255) ttttACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag > 5:365771‑M2/1‑62 (MQ=255) tACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaac > 8:305259‑M2/1‑59 (MQ=255) tctTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat < 6:386447‑M2/116‑61 (MQ=255) taatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGtt > 6:166547‑M1/49‑149 (MQ=255) aatgggtgaagtgataacagctgtctggaaatataggggcaactccaGTGCTGGCGCGTTTACTCACACCATTGAGGATAGCGCCGTTAATATTGACGCCTGCCTGTACCAGCCGCTGCATTGACAAACTCACCTCTTTGGCGGTGtt < 2:347126‑M1/101‑1 (MQ=255) ggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAg > 7:299793‑M1/44‑148 (MQ=255) ggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGc > 2:382692‑M1/44‑149 (MQ=255) ggAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat > 8:394878‑M2/1‑48 (MQ=255) gAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat > 2:396824‑M2/1‑47 (MQ=255) gAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat < 1:396824‑M2/147‑101 (MQ=255) gtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAAc < 8:119394‑M1/112‑1 (MQ=255) gtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAAc < 5:402300‑M1/112‑1 (MQ=255) ataACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga < 7:425736‑M2/124‑86 (MQ=255) aacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACgcgc < 5:297070‑M1/116‑1 (MQ=255) aaCCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg < 7:152343‑M2/149‑113 (MQ=255) cagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAAc < 1:102747‑M1/119‑1 (MQ=255) cGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg < 1:106009‑M2/146‑113 (MQ=255) tAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta < 3:219714‑M2/103‑72 (MQ=255) tAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta > 4:219714‑M2/1‑32 (MQ=255) ctgtaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAAccagcac > 5:281650‑M1/24‑147 (MQ=255) aGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga > 7:26305‑M2/1‑28 (MQ=255) aGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga < 8:26305‑M2/101‑74 (MQ=255) tggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCa > 7:350526‑M1/23‑86 (MQ=255) gTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagtaacg < 8:33574‑M2/147‑121 (MQ=255) gTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg < 2:421119‑M2/147‑121 (MQ=255) ataGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTgg > 8:101678/1‑149 (MQ=255) taGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagac > 2:286377‑M2/1‑23 (MQ=255) aatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGt > 4:140817‑M1/19‑149 (MQ=255) gCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacgg > 6:185230‑M2/1‑21 (MQ=255) taggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGcc > 2:210483‑M1/15‑148 (MQ=255) cGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg < 3:293428‑M2/145‑127 (MQ=255) cGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg > 4:293428‑M2/1‑19 (MQ=255) cGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct > 7:407960‑M2/1‑19 (MQ=255) cGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct < 8:407960‑M2/75‑57 (MQ=255) ggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCaa < 3:348248‑M1/104‑1 (MQ=255) aCTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtac > 7:305062‑M2/1‑15 (MQ=255) gcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTTGAGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGCAAACAg < 8:368951‑M1/139‑1 (MQ=255) tGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccaca < 7:308043‑M2/149‑137 (MQ=255) tAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtct < 6:873‑M2/115‑105 (MQ=255) gCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagga > 4:273418‑M2/1‑8 (MQ=255) gTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGCCAACAGAACGCCCCAc > 4:65209/1‑149 (MQ=255) gCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaaga > 3:69147‑M2/1‑3 (MQ=255) cTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagtctagtcattggagaacagatgattgatgtcttagggccggagaaccgcagacggcgtaccacacaggaa < 4:320948‑M2/144‑143 (MQ=255) ttagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa < 3:381485‑M2/143‑143 (MQ=255) | CTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGCCAACAGAACGCCCCACGA > NC_000913/1041941‑1042235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |