New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1943769 = | 80 (0.920) | 3 (0.030) | 3/262 | NT | 3.8% | coding (356/786 nt) | znuB | zinc ABC transporter permease |
? | NC_000913 | 1943789 = | 73 (0.850) | coding (376/786 nt) | znuB | zinc ABC transporter permease | |||||
Rejected: Frequency below/above cutoff threshold. |
CAAACGCCAGATCCGGGCTTATCGTCATTGACAGCAAATTGCGCCATTGCCAGAACAAAATAGCCACCACGATGACCACGCCAATCGCAATAGAGATGAGATCTTCTGGC‑GTCACTGCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1943891‑1943769 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGATCTCATCTCTATTGCGATTGGCGTGGTCATCGT > NC_000913/1943789‑1943823 CAAACGCCAGATCCGGGCTTATCGTCATTGACAGCAAATTGCGCCATTGCCAGAACAAAATAGCCACCACGATGACCACGCCAATCGCAATAGAGATGAGATCTGCTGGCAGTGAC‑GCCAGAAGATCTCATCTCTATTGCGATTGGCGT < 1:241538/149‑1 AAACGCCAGATCCGGGCTTATCGTCATTGACAGCAAATTGCGCCATTGCCAGAACAAAATAGCCACCACGATGACCACGCCAATCGCAATAGAGATGAGATCTGCTGGCAGTGAC‑GCCAGAAGATCTCATCTCTATTGCGATTGGCGT > 2:241538/1‑148 GATCCGGGCTTATCGTCATTGACAGCAAATTGCGCCATTGCCAGCACAAAATAGCCACCACGATGACCACGCCAATCGCAATAGAGATGAGATCTGCTGGCAGTGAC‑GCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGT < 1:297782/149‑1 CAAACGCCAGATCCGGGCTTATCGTCATTGACAGCAAATTGCGCCATTGCCAGAACAAAATAGCCACCACGATGACCACGCCAATCGCAATAGAGATGAGATCTTCTGGC‑GTCACTGCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1943891‑1943769 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGATCTCATCTCTATTGCGATTGGCGTGGTCATCGT > NC_000913/1943789‑1943823 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |