New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3805341 =	62 (1.940)	5 (0.160)	5/254	3.0	8.1%	coding (610/798 nt)	waaP	kinase that phosphorylates core heptose of lipopolysaccharide
	?	NC_000913	3805362 =	52 (1.650)					coding (589/798 nt)	waaP	kinase that phosphorylates core heptose of lipopolysaccharide
Rejected: Frequency below/above cutoff threshold.

ATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTT  >  NC_000913/3805215‑3805510                                                                                                                                                    |                                                                                                                                                     aTAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACt                                                                                                                                                     >  1:71082/1‑149 (MQ=255)     aTTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTg                                                                                                                                                 <  7:55995/149‑1 (MQ=255)        gataaatcaccgcgactgttacatttgccactttttgcttcatttgccatttactggccgggaagatgaattaaaaatttcagttatcgatctgcatcgggcacagatacgtgcaaaagtaccgcgccagcggcgcggtaCTTTTGCAc                                                                                                                                              <  1:16931‑M2/9‑1 (MQ=255)              aaGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCt                                                                                                                                        <  8:65808/149‑1 (MQ=255)                   aCAATATTTTGCGTAAAGGCATCCCAAAATAACCCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGcc                                                                                                                                   <  6:60889/149‑1 (MQ=255)                       tatTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGAt                                                                                                                               <  4:3417/149‑1 (MQ=255)                         ttttGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATg                                                                                                                              <  2:71082/148‑1 (MQ=255)                                tAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGcc                                                                                                                                   <  3:97339/136‑1 (MQ=255)                                tAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGcc                                                                                                                                   >  4:97339/1‑136 (MQ=255)                                tAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGa                                                                                                                      <  8:114318/149‑1 (MQ=255)                                          ccAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCCGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGAGAACTGAAAt                                                                                                            >  4:97330/1‑149 (MQ=255)                                           cAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAAtt                                                                                                           >  1:131587/1‑149 (MQ=255)                                                 atttgccatttactggccgggaagatgaattaaaaatttcagttatcgatctgcatcgggcacagatacgtgcaaaagtatcgcgccagcggcgcggtaCTTTTGCACGTATCtgt                                                                                                                                      <  5:139209‑M2/17‑1 (MQ=255)                                                 atttgccatttactggccgggaagatgaattaaaaatttcagttatcgatctgcatcgggcacagatacgtgcaaaagtatcgcgccagcggcgcggtaCTTTTGCACGTATCtgt                                                                                                                                      >  6:139209‑M2/100‑116 (MQ=255)                                                 aaaCCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTaa                                                                                                      <  7:29567/148‑1 (MQ=255)                                                 aaaCCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTaa                                                                                                      >  8:29567/1‑148 (MQ=255)                                                   aCCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAAtt                                                                                                    >  3:54032/1‑148 (MQ=255)                                                        cATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCAt                                                                                                 <  2:175652/146‑1 (MQ=255)                                                        cATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCAt                                                                                                 >  1:175652/1‑146 (MQ=255)                                                         aTAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTc                                                                                             >  5:75521/1‑149 (MQ=255)                                                                 ccAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCtgt                                                                                                                                      >  6:545/1‑100 (MQ=255)                                                                       atCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCa                                                                                                                                               >  8:116520/1‑85 (MQ=255)                                                                       atCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCa                                                                                                                                               <  7:116520/85‑1 (MQ=255)                                                                       atCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATg                                                                               >  3:23494/1‑149 (MQ=255)                                                                            tttGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCa                                                                                      <  7:10278/137‑1 (MQ=255)                                                                            tttGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCa                                                                                      >  8:10278/1‑137 (MQ=255)                                                                            tttGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGc                                                                             <  2:131587/146‑1 (MQ=255)                                                                            tttGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCaaa                                                                          >  2:1244/1‑149 (MQ=255)                                                                              ttaaaaatttcagttatcgatctgcatcgggcacagatacgtgcaaaagtatcgcgccagcggcgcggtaCttt                                                                                                                                                   <  1:85798‑M2/4‑1 (MQ=255)                                                                              ttaaaaatttcagttatcgatctgcatcgggcacagatacgtgcaaaagtatcgcgccagcggcgcggtaCttt                                                                                                                                                   >  2:85798‑M2/71‑74 (MQ=255)                                                                                           tatTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTgg                                                           >  2:110/1‑149 (MQ=255)                                                                                              tCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGaa                                                                      >  8:91171/1‑135 (MQ=255)                                                                                              tCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGaa                                                                      <  7:91171/135‑1 (MQ=255)                                                                                              tCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCa                                                         >  2:158987/1‑148 (MQ=255)                                                                                               cATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCCTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCaaa                                                       >  2:155566/1‑149 (MQ=255)                                                                                               cATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCCTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCaaa                                                       >  2:153207/1‑149 (MQ=255)                                                                                                aTTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAAt                                                      >  1:91852/1‑149 (MQ=255)                                                                                                    atgaGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTaa                                                  <  1:110/149‑1 (MQ=255)                                                                                                      gagaAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAAc                                                                                                                  >  4:14900/1‑83 (MQ=255)                                                                                                      gagaAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAAc                                                                                                                  <  3:14900/83‑1 (MQ=255)                                                                                                       agaAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACa                                                <  1:1244/148‑1 (MQ=255)                                                                                                            tataAACCAATCAGGTCTTTATCGCGCAAGCGGCGCGGTACTTTTGCACGTATCTGTTCCCTATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTcgcg                                          <  3:97330/149‑1 (MQ=255)                                                                                                             ataAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCgg                                         >  4:25260/1‑149 (MQ=255)                                                                                                              taAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGt                                        <  2:91852/149‑1 (MQ=255)                                                                                                              acagatacgtgcaaaagTACCGCGCCGCTGGCGCGATACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAAt                                                                         <  5:139209‑M1/99‑1 (MQ=255)                                                                                                              acagatacgtgcaaaagTACCGCGCCGCTGGCGCGATACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAAt                                                                         >  6:139209‑M1/18‑116 (MQ=255)                                                                                                               aaaCCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGt                                        >  1:86115/1‑148 (MQ=255)                                                                                                                 aCCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCaaaaa                                                               >  4:99080/1‑123 (MQ=255)                                                                                                                 aCCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCaaaaa                                                               <  3:99080/123‑1 (MQ=255)                                                                                                                  ccAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGAtt                                    <  4:23494/149‑1 (MQ=255)                                                                                                                  ccAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGAtt                                    >  1:52654/1‑149 (MQ=255)                                                                                                                      tCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATc                                >  3:64412/1‑149 (MQ=255)                                                                                                                      gtgcaaaagTACCGCGCCGCTGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATc                                <  1:16931‑M1/140‑1 (MQ=255)                                                                                                                         ggTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCt                             <  4:54032/149‑1 (MQ=255)                                                                                                                           tCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGc                           <  6:75521/149‑1 (MQ=255)                                                                                                                           aaagTACCGCGCCGCTGGCGCGATACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTaa                                                                                                      <  1:85798‑M1/70‑1 (MQ=255)                                                                                                                           aaagTACCGCGCCGCTGGCGCGATACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTaa                                                                                                      >  2:85798‑M1/5‑74 (MQ=255)                                                                                                                             tttATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGAt                                     <  4:39660/137‑1 (MQ=255)                                                                                                                             tttATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGAt                                     >  3:39660/1‑137 (MQ=255)                                                                                                                               TATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCaaa                                                       >  2:100281‑M1/1‑117 (MQ=255)                                                                                                                               TATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCaaa                                                       <  1:100281‑M1/117‑1 (MQ=255)                                                                                                                                 tCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATg                     >  6:14799/1‑149 (MQ=255)                                                                                                                                       cAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCAtttt               <  5:14799/149‑1 (MQ=255)                                                                                                                                              gcgGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCAcc        <  7:121461/149‑1 (MQ=255)                                                                                                                                                    cTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGATGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGtt  >  6:153886/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     ATAAATTCTGTTCAAGAGACAATATTTTGCGTAAAGGCATCCCAAAATAAACCTTCATAAATCGCCAGATATCTCTTTGCGTCAGGCCAATATTCATTGATGAGAAATATAAACCAATCAGGTCTTTATCGCGCCAGCGGCGCGGTACTTTTGCACGTATCTGTGCCCGATGCAGATCGATAACTGAAATTTTTAATTCATCTTCCCGGCCAGTAAATGGCAAATGAAGCAAAAAGTGGCAAATGTAACAGTCGCGGTGATTTATCCCTGCAGTATGCATTTTACGCACCATAGTT  >  NC_000913/3805215‑3805510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.